Basic Information

Insect: Glyphodes pyloalis
Gene Symbol: -
Assembly: GCA_037074685.1
Location: JAYKKO010000034.1:4797968-4807492[-]

Transcription Factor Domain

TF Family: bHLH
Domain: HLH domain
PFAM: PF00010
TF Group: Basic Domians group
Description: A basic helix-loop-helix (bHLH) is a protein structural motif that characterizes one of the largest families of dimerizing transcription factors.It should not be confused with the helix-turn-helix domain.The motif is characterized by two α-helices connected by a loop. In general, transcription factors including this domain are dimeric, each with one helix containing basic amino acid residues that facilitate DNA binding. In general, one helix is smaller, and, due to the flexibility of the loop, allows dimerization by folding and packing against another helix. The larger helix typically contains the DNA-binding regions. bHLH proteins typically bind to a consensus sequence called an E-box, CANNTG. The canonical E-box is CACGTG (palindromic), however some bHLH transcription factors, notably those of the bHLH-PAS family, bind to related non-palindromic sequences, which are similar to the E-box. bHLH TFs may homodimerize or heterodimerize with other bHLH TFs and form a large variety of dimers, each one with specific functions.https://en.wikipedia.org/wiki/Basic_helix-loop-helix
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.61 3.9e+02 1.9 0.0 12 28 82 98 80 111 0.90

2 14 0.61 3.9e+02 1.9 0.0 12 28 126 142 124 155 0.90

3 14 0.6 3.8e+02 1.9 0.1 12 28 170 186 168 201 0.89

4 14 0.047 30 5.5 0.1 10 28 284 302 279 316 0.88

5 14 0.6 3.8e+02 1.9 0.0 12 28 330 346 328 360 0.90

6 14 0.59 3.8e+02 1.9 0.1 12 28 418 434 411 450 0.89

7 14 0.59 3.8e+02 1.9 0.1 12 28 462 478 455 491 0.91

8 14 0.6 3.8e+02 1.9 0.0 12 28 506 522 504 536 0.90

9 14 3.9 2.5e+03 -0.7 0.1 12 27 550 565 549 574 0.89

10 14 0.047 30 5.5 0.1 10 28 664 682 659 696 0.88

11 14 0.61 3.9e+02 1.9 0.0 12 28 710 726 708 739 0.90

12 14 0.6 3.8e+02 1.9 0.1 12 28 754 770 752 786 0.89

13 14 0.59 3.8e+02 1.9 0.1 12 28 798 814 791 830 0.89

14 14 0.27 1.7e+02 3.0 0.0 12 29 842 859 835 884 0.85

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.61	3.9e+02	1.9	0.0	12	28	82	98	80	111	0.90
2	14	0.61	3.9e+02	1.9	0.0	12	28	126	142	124	155	0.90
3	14	0.6	3.8e+02	1.9	0.1	12	28	170	186	168	201	0.89
4	14	0.047	30	5.5	0.1	10	28	284	302	279	316	0.88
5	14	0.6	3.8e+02	1.9	0.0	12	28	330	346	328	360	0.90
6	14	0.59	3.8e+02	1.9	0.1	12	28	418	434	411	450	0.89
7	14	0.59	3.8e+02	1.9	0.1	12	28	462	478	455	491	0.91
8	14	0.6	3.8e+02	1.9	0.0	12	28	506	522	504	536	0.90
9	14	3.9	2.5e+03	-0.7	0.1	12	27	550	565	549	574	0.89
10	14	0.047	30	5.5	0.1	10	28	664	682	659	696	0.88
11	14	0.61	3.9e+02	1.9	0.0	12	28	710	726	708	739	0.90
12	14	0.6	3.8e+02	1.9	0.1	12	28	754	770	752	786	0.89
13	14	0.59	3.8e+02	1.9	0.1	12	28	798	814	791	830	0.89
14	14	0.27	1.7e+02	3.0	0.0	12	29	842	859	835	884	0.85

Sequence Information

Coding Sequence: ATGACGGTTGAGGAGGTGGCTGGGTTGCCCACCATCAAGTACTCGATGCGAGTCCAAGCGCTCCATCTCAGCGATGAGAACCTGGCCTTCCTCAAGGGGCTCCGGAGACGAATTAAGAATCGGATGGCCTCTCAAAACAGCAGGCGACGGAGTATGGAGCACCTGAAGCGCTTGACGCGCGAGCTCCGAGCCGTTCGCGCGTGCAGGGACGACGCGCTCTCGGAGAGAAAGGCGCTGCTGGTGCGGCGCGGCGAGCTGCGGGACAGCTGCCAGCGGCTGAGGCACCACGTGCTGCAGGTGAGGTGGCCAGGGAACAGCTGGAGCCGTCCAGCTTGTAGGGACGACGCGCTCTCGGAGAGAAAGGCGCTGCTGGTGCGGCGCGGCGAGCTGCGGGACAGCTGCCAGCGGCTGAGGCACCACGTGCTGCAGGTGAGGTGGCCAGGGAACAGCTGGAGCCGTCCAGCTTGTAGGGACGACGCGCTCTCGGAGAGAAAGGCGCTGCTGGTGCGGCGCGGCGAGCTGCGGGACAGCTGCCAGCGGCTGAGGCACCACGTGCTGCAGGTGAGGTGGCCAGGGAACAGCTGGAGCCGTCCAGCTTGTAGGGACGACGCGCTCTCGGAGAGAAAGGCGCGGCGAGCTGCGGGACAGCTGCCAGTGGCTGAGGCACCACGTGCTGCAGGTGAGGTGGCCAGGGGACAGCTGGAGCCGTCCAGCTCGTTGGGACGACGCGCTCTCGGAGAGAAAGGCGCTGCTGGTGCGGCGCGGCGAGCTGCGGGACAGCTGCCAGCGGCTGAGGCACCACGTGCTGCAGCTGGAGCCGTCCAGCTCGTAGGGACGACGCGCTCTCGGAGAGAAAGGCGCGGCGAGCTGCGGGACAGCTGCCAGCGGCTGAGGCACCACGTGCTGCAGGTGAGGTGGCCAGGGGACAGCTGGAGCCGTCCAGCTTGTAGGGACGACGCGCTCTCGGAGAGAAAGGCGCTGCTGGTGCGGCGCGGCGAGCTGCGGGACAGCTGCCAGCGGCTGAGGCACCACGTGCTGCAGGTGAGGTGGCCAGGGAACAGCTGGAGCCGTCCAGCTTGTAGGGACGACGCGCTCTCGGAGAGAAAGGCGCTGCTGGTGCGGCGCGGCGAGCTGTGGGACAGCTGCCAGCGGCTGAGGCACCACGTGCTGCAGGTGAGGTGGCCAGGGGACAGCTGGAGCCGTCCAGCTCGTAGGGACGACGCGCTCTCGGAGAGAAAGGCGCTGCTGGTGCGGCGCGGCGAGCTGCGGGACAGCTGCCAGCGGCTGAGGCACCACGTGCTGCAGGTGAGGTGGCCAGGGAACAGCTGGAGCCGTCCAGCTCGTAGGGACGACGCGCTCTCGGAGAGAAAGGCGCTGCTGGTGCGGCGCGGCGAGCTGCGGGACAGCTGCCAGCGGCTGAGGCACCACGTGCTGCAGGTGAGGTGGCCAGGGAACAGCTGGAGCCGTCCAGCTTGTAGGGACGACGCGCTCTCGGAGAGAAAGGCGCTGCTGGTGCGGCGCGGCGAGCTGCGGGACAGCTGCCAGCGGCTGAGGCACCACGTGCTGCAGGTGAGGTGGCCAGGGAACAGCTGGAGCCGTCCAGCTTGTAGGGACGACGCGCTCTCGGAGAGAAAGGCGCTGCTGGTGCGGCGCGGCGAGCTGCGGGACAGCTGCCAGCGGCTGAGGCACCGCGTGCTGCAGGTGAGGTGGCCAGGGAACAGCTGGAGCCGTCCAGCTTGTAGGGACGACGCGCTCTCGGAGAGAAAGGCGCGGCGAGCTGCGGGACAGCTGCCAGCGGCTGAGGCACCACGTGCTGCAGGTGAGGTGGCCAGGGGACAGCTGGAGCCGTCCAGCTCGTTGGGACGACGCGCTCTCGGAGAGAAAGGCGCTGCTGGTGCGGCGCGGCGAGCTGCGGGACAGCTGCCAGCGGCTGAGGCACCACGTGCTGCAGCTGGAGCCGTCCAGCTCGTAGGGACGACGCGCTCTCGGAGAGAAAGGCGCGGCGAGCTGCGGGACAGCTGCCAGCGGCTGAGGCACCACGTGCTGCAGGTGAGGTGGCCAGGGGACAGCTGGAGCCGTCCAGCTTGTAGGGACGACGCGCTCTCGGAGAGAAAGGCGCTGCTGGTGCGGCGCGGCGAGCTGCGGGACAGCTGCCAGCGGCTGAGGCACCACGTGCTGCAGGTGAGGTGGCCAGGGAACAGCTGGAGCCGTCCAGCTTGTAGGGACGACGCGCTCTCGGAGAGAAAGGCGCTGCTGGTGCGGCGCGGCGAGCTGCGGGACAGCTGCCAGCGGCTGAGGCACCACGTGCTGCAGGTGAGGTGGCCAGGGGACAGCTGGAGCCGTCCAGCTCGTAGGGACGACGCGCTCTCGGAGAGAAAGGCGCTGCTGGTGCGGCGCGGCGAGCTGCGGGACAGCTGCCAGCGGCTGAGGCACCACGTGCTGCAGGTGAGGTGGCCAGGGAACAGCTGGAGCCGTCCAGCTCGTAGGGACGACGCGCTCTCGGAGAGAAAGGCGCTGCTGGTGCGGCGCGGCGAGCTGCGGGACAGCTGCCAGCGGCTGAGGCACCACGTGCTGCAGATTCTACAAGGCCGGCACGACACTTCAGAAGTACCAGATATATCGGTACCAACGCCAGAATCTCAAccgaaaccaaaaataaaacaggaaGTCGCACCTCTAGAAGGCGAGCTAGATGATAAAAATGTCTTCGAATGTAGGATAGACAAACTTGTACAACAGAGCGTGAATCACATATTTAAAACGGAGAAGAAGATATACGCAAAAACAGTATTCCTGTCCGATGATAATGTAATTAAACAGGATATTGATCCAGAGTTAAAGACGAAAAGATCTTCAGGGAAGTGCGAGAGTGATATACAATTCAGTCAGGATGTTAAGTTTCATGATTCTGATGTAGGTTCGGTCGTTATAAAGGGGTACGGTGAGGGCTTGGGGGTGGACGGGCAGGTCTTGAACTTGTCAGTGAAGGAGGGGAGGAGGAAAAATCACGGGAGGAAGCAGTCTGCGCCAAGGAGGATCACGTATGTCGAATACGCTGAGATAACCATGGACGATGTTCTGGATCTTAAAGTGAAGAAGGAGCCGAAGTGA
Protein Sequence: MTVEEVAGLPTIKYSMRVQALHLSDENLAFLKGLRRRIKNRMASQNSRRRSMEHLKRLTRELRAVRACRDDALSERKALLVRRGELRDSCQRLRHHVLQVRWPGNSWSRPACRDDALSERKALLVRRGELRDSCQRLRHHVLQVRWPGNSWSRPACRDDALSERKALLVRRGELRDSCQRLRHHVLQVRWPGNSWSRPACRDDALSERKARRAAGQLPVAEAPRAAGEVARGQLEPSSSLGRRALGEKGAAGAARRAAGQLPAAEAPRAAAGAVQLVGTTRSRRERRGELRDSCQRLRHHVLQVRWPGDSWSRPACRDDALSERKALLVRRGELRDSCQRLRHHVLQVRWPGNSWSRPACRDDALSERKALLVRRGELWDSCQRLRHHVLQVRWPGDSWSRPARRDDALSERKALLVRRGELRDSCQRLRHHVLQVRWPGNSWSRPARRDDALSERKALLVRRGELRDSCQRLRHHVLQVRWPGNSWSRPACRDDALSERKALLVRRGELRDSCQRLRHHVLQVRWPGNSWSRPACRDDALSERKALLVRRGELRDSCQRLRHRVLQVRWPGNSWSRPACRDDALSERKARRAAGQLPAAEAPRAAGEVARGQLEPSSSLGRRALGEKGAAGAARRAAGQLPAAEAPRAAAGAVQLVGTTRSRRERRGELRDSCQRLRHHVLQVRWPGDSWSRPACRDDALSERKALLVRRGELRDSCQRLRHHVLQVRWPGNSWSRPACRDDALSERKALLVRRGELRDSCQRLRHHVLQVRWPGDSWSRPARRDDALSERKALLVRRGELRDSCQRLRHHVLQVRWPGNSWSRPARRDDALSERKALLVRRGELRDSCQRLRHHVLQILQGRHDTSEVPDISVPTPESQPKPKIKQEVAPLEGELDDKNVFECRIDKLVQQSVNHIFKTEKKIYAKTVFLSDDNVIKQDIDPELKTKRSSGKCESDIQFSQDVKFHDSDVGSVVIKGYGEGLGVDGQVLNLSVKEGRRKNHGRKQSAPRRITYVEYAEITMDDVLDLKVKKEPK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -