Gcon025501.1
Basic Information
- Insect
- Glossosoma conforme
- Gene Symbol
- -
- Assembly
- GCA_003347265.1
- Location
- PZYU01042578.1:1-10300[+]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.9e-05 4 7.9 0.0 44 105 7 74 5 104 0.63 2 2 1.8e-12 7.9e-08 33.3 2.4 339 413 102 176 71 178 0.82
Sequence Information
- Coding Sequence
- GTGAGTCCGGTGGCGACGGACTCGATGGCCCAGCAGATCCGGCGGCAGCTGGGCGACTACCGGATTATGCAGCAGATCCTGGACGACCCCAAGTCTTCCATCGGCGTGTACGGAGAGCCGGCCAGCCCAGCGCCAGGCGGACCACCGCGCGGCGGGGAGTTCAAGAAGCCCCATCACGCCTCGTCGCAGAATGGCAGACCTCACACCAGGGTGCCGTTCTACTCCAAGTTTCCCGATGGAGGTCCACCTGCCATGCCCAGCAGGGCAGCACCTCCAAGGTTCAACAGCGGGAAGTCGTCTCCGAATGCGGGAGATCCGAACGCGGCACCTCACATAGAAAACATCTTAAAgGAGATGACTGCTGTTGTCCGACCTCCGCTGACGGCCATTGCAGCAACGCCTCGCAAGGAGATGGAGTCCAAGTTCAACTTCAACATGGTCCACACCCAGGAGATCAACGAGAGCCACGCCCAGAACAGCGTCCCCTCCGAACCCAAGCAGGTCCCTCAGCAAAAACAACGTGAGTCCACTTTTTAA
- Protein Sequence
- VSPVATDSMAQQIRRQLGDYRIMQQILDDPKSSIGVYGEPASPAPGGPPRGGEFKKPHHASSQNGRPHTRVPFYSKFPDGGPPAMPSRAAPPRFNSGKSSPNAGDPNAAPHIENILKEMTAVVRPPLTAIAATPRKEMESKFNFNMVHTQEINESHAQNSVPSEPKQVPQQKQRESTF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -