Gpap006206.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Glossina palpalis
Gene Symbol
sip1
Assembly
GCA_000818775.1
Location
Scaffold5:342893-356789[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.6e-94 2.4e-90 303.0 15.5 1 275 448 718 448 718 0.99
2 2 0.13 8.5e+02 -0.5 0.1 155 189 728 761 722 772 0.65

Sequence Information

Coding Sequence
ATGAATATCAAGGAAACACCTTTGTTTGGCTTCGCCAGCGAAACTGAAGAAGGAGCTATAGCCGCGAAATATCTCAAAGACGTACCTGTCAATAACTGTGAATTATTGAATCAAGATAACGAATATGAACGTTTCGAAATAACTGATTATGATATCGACAATGAATTTAATCCGAATAGGCCAAGAAAGAAACTTAGCAAACAGCAGCAAATATATGGTATTTGGGCCGACGATAGTGACAATGAGGACGTACAAGAAACAAGCGGTCGCCGAAGCCGCAAAGGTCGTTCGGGTTTCGGTGGCGTTTCGAAAGCTAAGCGGTCCAAAGATTACACTGCACCGGTAAATTTTGTTGCTGGTGGAATACAACAATCTGGAAAGAAAAAACCAGTTGATGATGGCAAAGATGATCATCCTATTACCGATGAAGAAGATGATCTAGAAGCTAGGCCGGGTTTTGGTAGCGGTGCTGCAATTATTGATAATGATGAATCTTCGGATTCTAGTAATGAGTCCACCGAAGAAGAGCAGATTAAAAATAGCAAGACAAAGCCGATGGGTCAACCAGGCTACCGGAGTAATGTCAAATCTCTCGGCGCCTGGGAACAGCATACTCGTGGTATTGGAGCCAAGCTATTGCTGCAAATGGGTTACGAACCGGGGAAAGGTTTGGGTAAAGATCTACAAGGTATTGCTCAACCGGTGGAAGCTCATGTGCGCAAAGGTCGTGGTGCAATAGGAGCGTATGGTCCAGAAACCTCTGCTTCAGTAACCGGAAAAGCACAACTTGACGAAGATATAAGAGATGCTAAAGAGTTCAAAGAGAAACTAAATAAGTGGAAGAAGACAGACAGCCGTAGCGAGAAGAATTCaaaaaaaTATTACTATAAGACTGTGGAAGAGGTTCTGGAGAAGGGTAAAAGATCCAATTTTATGTTGGGCGATAAAATTAGCAAAAAGTTGGGAAACGTTCCAGTAATCGATATGACTGGTCCCGAGAAGCGCGTTTTAAGTGGATATCATGCTTTAAGCCAATCTAAAGTTCAAGAAGAAGATCTTTATGATCTTACTCATGACGCTCAGaaaaaaaCTACCAATACTTCGGGAGGCTTTGCTCTTCCAGAATTAATGCATAATTTGTCTTTAATAGTCAATATGTGCGAACAAGATATTATAACTTTGGACTCAGCTGAGCATAGCGCATCTGAGCGCTTTACCGCTTTAGAACAGGAGAGAAAGCAATTGCTGGAAATTGTTAGATTGGAAGAAGACCACATTGACACTTTAGAAAAAGCTTTAGCTCTGGTTAATGAGCTAACCTCCAGCGAAGATAAATTAACCTTGCAACGTGCCGAGCAAATATTTATAGAATTGCAGCAAAAATACGCAGCCGAATATAAGGAATTCTGTTTGGACGATTTAGCTGCGGGTGTAATAGCCCCATTAGTTAAAGATGCTTTAAAAGATTGGCAACCTTTAGAAAATCCCACTTTGCATGTGGATCTAATTAGAAAATGGCGAGCTATTTTGGAGACTTTCGCTGATCCTCAGTCTTTGGCGCGTACTAATATATTTGATCCGTATTCCTCGTTGATCTGGGCTGGTGTAATACCTTCATTTCGGGCTTGTGCTGAACATTGGCAGCCAAAAAATCATCAAATAATGGCTGCTTTACTAGATTGTTGGGCTCCATTGTTTCCTTCCTGGATCTTAGACTCCGTATTGGAGCAATTGGTACTGCCGCGTTTGCATGTTGGCGTAAAATCTTGGGATCCTTTGACTGATACAGTACCCATACATATATGGATTTTACCATGGAATTCTATATTAGGACATAAAATGGAAGAGTTTATCTATCCGACTATACGCGAGAAGTTAGGTAATGCTTTGCAAGCGTGGATTCCGCAAGATCGTTCAGCTCGGGCTATGCTCACACCTTGGAAGGGTGCTTTTGATTCGCAGGAAATGGAGGtttttttAATGCAGCACATAATACCAAAGTTGCTAATGGTTTTAAACGATTTCATTATCAATCCTCTGCAACAAGATTTGGAACCTTGGAGTCAAGTGTGGGAATGGCATGAATTAATACCAACTGCGCAAATGGCTCGCATGCTGGATAAGCACTTCTTTCCTAAATGGATGCAAGTTCTAGTTCTGTGGTTGAATCAGTCCCCCGATTATGTGGAAATATCCAATTGGTATACGGGCTGGAAAAGTATGCTCTCGGACGATTTGTTAAATGAGCCCAATATCAAAGAACATTTACGTAGAGCTTTGGAAATTATGCATCGTGTTACGGATTCTGTTATAAAAGATGGACCGAGTGCAGCGCCACCGCCTCCTCAACCCCCACCAACGCCGCAAGCTTTAGTTGATTTGCAAATGTCTGGCGCTCCCGTAGTCGAATTTAAGGAACTAGTTTCCCGCAAATGTTCAGAGCGTGGCATCATTTTCGCTCCCCTGCCCGGCAGACGGGAACTTGGCAAACAAATCTATCGGGTCGTGTTAAACAATGTTTTGAACAGTTCACAACTGGCTACGTTTAAACGCGAAGAAGCGGCAAAAGTTAGTAAAAATTTCACTAATAATATATCTCAACGTCTTAAAGTTCTACTGGGATGTCAAGATCGTCCTTTAATTTTCGAGAAACGACAATATGGCAACTATTGGTTATTAAAAAATTTCATACGTGGGCGTTTAAGTGAAAAAATAGGTTGTTCGGAGGCAATAACGTATTGTACAAACGGAGATTACACCTTTTTTGATAACTTGCCCGAAGTGCTTAAGCGATGGTTCGCTCCGGTAAGTTTTGCAATTTTCGCGCCTGGTTACGATTTCAAAATTGCAATGGATTCAATACAATATGTACGCAATTGTTTAAAGGAGTCTCAATTGATACAAAAGTATGTGACTTTCCACATTTATTTTCCAAGCCGCCATATGCCCGACTATTTGCCTATAACTGAAGAAGAAATCGATAATTGGCCGTACGATTGTTTGGTGAAACCTTATGAGAACAGCACTCGAGCCGACATGTATAAAACTAAAAATAAATTACTGTACCCGATTAATGTGGGCCGTAATATAGCACGAGAGGCAGCTAATACACATTTTGTATTTGTCTGCGATATTGAATTATTTCCTAGTAAAAATTTAATAAAACAATTCTTTAGAATGTTATTACGTGACAAAGCGCTAATACCGTCTAGAGGCAATGGAGGGGAAGAGGAAGAATATAGAGTTTTTCCCATACCAGTGTTCGAGGTCGCTAAGACGTCTTCGGTGCCAGAGAATAAAGCGGAATTGTTAAAAATGTTGAAAGCCGAACTCGCAATACCCTTTCATAAGTTTACTTGCAAAAATTGCCATATGGTGCCGGGTTACGGTAAATGGTTAAATAGGACAAATGTTAACACCATGGAAATCATTGCGGTATCTAAACGTGAGGGTAAATTTGCTTCTTGGGAGCCGTTCTATATTAGTGATAACCGAGAACCGATGTTCGATGAACGCGTTACTTGGGAGGGACAATCAAATAAGCGAATACAAAACTATGCCATGTGTTTATTAGGTTTTAAGTATCACGTTTTACATCCCGCCTTCTTAGTACATACACCTGGTATTAAGAGAGTCAATCTTAAGGATCCACGCCTTAAGTACGTAGCACCTACAAATGCATTAATCCGTAAAAAGATAATACCTGAATATCATATATTATACGAAAACTGTTTTATTCTCAATCTTTTAATTTGGTTGTTGCAAATCTTAGGCTATGAGTTTACTGTAAATGATGATGCCTTTCTGTTGCATCGTTCGTCGTCAAATGTATTCAAACGTGAGGAGACAGTGAATACTATAGACATTGCCATCAAAAATTATTAA
Protein Sequence
MNIKETPLFGFASETEEGAIAAKYLKDVPVNNCELLNQDNEYERFEITDYDIDNEFNPNRPRKKLSKQQQIYGIWADDSDNEDVQETSGRRSRKGRSGFGGVSKAKRSKDYTAPVNFVAGGIQQSGKKKPVDDGKDDHPITDEEDDLEARPGFGSGAAIIDNDESSDSSNESTEEEQIKNSKTKPMGQPGYRSNVKSLGAWEQHTRGIGAKLLLQMGYEPGKGLGKDLQGIAQPVEAHVRKGRGAIGAYGPETSASVTGKAQLDEDIRDAKEFKEKLNKWKKTDSRSEKNSKKYYYKTVEEVLEKGKRSNFMLGDKISKKLGNVPVIDMTGPEKRVLSGYHALSQSKVQEEDLYDLTHDAQKKTTNTSGGFALPELMHNLSLIVNMCEQDIITLDSAEHSASERFTALEQERKQLLEIVRLEEDHIDTLEKALALVNELTSSEDKLTLQRAEQIFIELQQKYAAEYKEFCLDDLAAGVIAPLVKDALKDWQPLENPTLHVDLIRKWRAILETFADPQSLARTNIFDPYSSLIWAGVIPSFRACAEHWQPKNHQIMAALLDCWAPLFPSWILDSVLEQLVLPRLHVGVKSWDPLTDTVPIHIWILPWNSILGHKMEEFIYPTIREKLGNALQAWIPQDRSARAMLTPWKGAFDSQEMEVFLMQHIIPKLLMVLNDFIINPLQQDLEPWSQVWEWHELIPTAQMARMLDKHFFPKWMQVLVLWLNQSPDYVEISNWYTGWKSMLSDDLLNEPNIKEHLRRALEIMHRVTDSVIKDGPSAAPPPPQPPPTPQALVDLQMSGAPVVEFKELVSRKCSERGIIFAPLPGRRELGKQIYRVVLNNVLNSSQLATFKREEAAKVSKNFTNNISQRLKVLLGCQDRPLIFEKRQYGNYWLLKNFIRGRLSEKIGCSEAITYCTNGDYTFFDNLPEVLKRWFAPVSFAIFAPGYDFKIAMDSIQYVRNCLKESQLIQKYVTFHIYFPSRHMPDYLPITEEEIDNWPYDCLVKPYENSTRADMYKTKNKLLYPINVGRNIAREAANTHFVFVCDIELFPSKNLIKQFFRMLLRDKALIPSRGNGGEEEEYRVFPIPVFEVAKTSSVPENKAELLKMLKAELAIPFHKFTCKNCHMVPGYGKWLNRTNVNTMEIIAVSKREGKFASWEPFYISDNREPMFDERVTWEGQSNKRIQNYAMCLLGFKYHVLHPAFLVHTPGIKRVNLKDPRLKYVAPTNALIRKKIIPEYHILYENCFILNLLIWLLQILGYEFTVNDDAFLLHRSSSNVFKREETVNTIDIAIKNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00748963; iTF_00748220;
90% Identity
iTF_00748220;
80% Identity
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