Basic Information

Insect: Glossina pallidipes
Gene Symbol: Znf335
Assembly: GCA_000688715.1
Location: Scaffold21:1938879-1942563[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.075 5.8 7.7 2.3 1 23 15 38 15 38 0.93

2 19 0.029 2.2 9.0 9.7 1 23 128 150 128 150 0.97

3 19 0.00035 0.027 15.0 0.7 1 23 156 178 156 178 0.98

4 19 0.0002 0.015 15.8 2.4 1 23 192 214 192 214 0.96

5 19 0.00096 0.074 13.6 4.7 1 23 220 242 220 242 0.99

6 19 3.2 2.4e+02 2.6 2.2 1 23 248 270 248 270 0.96

7 19 6.7e-07 5.2e-05 23.5 1.0 1 23 276 299 276 299 0.96

8 19 3.2e-06 0.00025 21.4 1.3 1 23 305 328 305 328 0.94

9 19 4.8 3.7e+02 2.0 4.0 1 23 335 357 335 357 0.84

10 19 0.0028 0.21 12.2 0.5 1 17 362 378 362 379 0.89

11 19 4.5 3.5e+02 2.1 0.2 9 20 376 387 375 390 0.89

12 19 0.00036 0.028 14.9 0.9 1 23 396 418 396 418 0.98

13 19 0.02 1.5 9.5 4.8 1 23 432 454 432 454 0.96

14 19 0.0015 0.12 13.0 4.4 1 23 460 482 460 482 0.99

15 19 5 3.8e+02 1.9 3.5 1 23 488 510 488 510 0.94

16 19 7.3e-06 0.00056 20.3 0.7 1 23 516 539 516 539 0.96

17 19 8.3e-07 6.4e-05 23.3 1.4 1 23 545 568 545 568 0.96

18 19 0.0095 0.73 10.5 0.3 1 23 575 597 575 597 0.96

19 19 1.4e-06 0.00011 22.6 1.3 1 23 602 624 602 624 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.075	5.8	7.7	2.3	1	23	15	38	15	38	0.93
2	19	0.029	2.2	9.0	9.7	1	23	128	150	128	150	0.97
3	19	0.00035	0.027	15.0	0.7	1	23	156	178	156	178	0.98
4	19	0.0002	0.015	15.8	2.4	1	23	192	214	192	214	0.96
5	19	0.00096	0.074	13.6	4.7	1	23	220	242	220	242	0.99
6	19	3.2	2.4e+02	2.6	2.2	1	23	248	270	248	270	0.96
7	19	6.7e-07	5.2e-05	23.5	1.0	1	23	276	299	276	299	0.96
8	19	3.2e-06	0.00025	21.4	1.3	1	23	305	328	305	328	0.94
9	19	4.8	3.7e+02	2.0	4.0	1	23	335	357	335	357	0.84
10	19	0.0028	0.21	12.2	0.5	1	17	362	378	362	379	0.89
11	19	4.5	3.5e+02	2.1	0.2	9	20	376	387	375	390	0.89
12	19	0.00036	0.028	14.9	0.9	1	23	396	418	396	418	0.98
13	19	0.02	1.5	9.5	4.8	1	23	432	454	432	454	0.96
14	19	0.0015	0.12	13.0	4.4	1	23	460	482	460	482	0.99
15	19	5	3.8e+02	1.9	3.5	1	23	488	510	488	510	0.94
16	19	7.3e-06	0.00056	20.3	0.7	1	23	516	539	516	539	0.96
17	19	8.3e-07	6.4e-05	23.3	1.4	1	23	545	568	545	568	0.96
18	19	0.0095	0.73	10.5	0.3	1	23	575	597	575	597	0.96
19	19	1.4e-06	0.00011	22.6	1.3	1	23	602	624	602	624	0.99

Sequence Information

Coding Sequence: ATGGGAGAATTTGAAGAATTGGAGAGTAATGTAAACGTCAGTTTTCAGTGCATTTTTTGTCAGAAAACTTTTACGAAACTTGATGCGTTCCTAGAGCATTTTCAAAGCAAACATTACAAAGCATCTACTCCTGTGGAAGAGTTTTGTTTGTTGAGTGATTTTGAAGATGTTGATGAAGAGAAAGAAATTTTGCTTACAACAGAAGAGGATGTTAATGTATCAGGTAAAGATGAAGATTCGACTTCTCAACTGGAATTCCTTTTGGAAAGTGCTGAAGGAGAGATGACTAGTGATCATGACTCCAATATACTATTACCAGATGAAAATGAGAAAATTGCTGCGCATTCTAAACCACAGGCTGAAAATAGCAAACGTGGGGAACACAATTGTCCCCATTGCTGTAAAGTATTTAAAAGAACTTGGGATTTGAAGCAACATTTGCACACACACGATGGACTGAAACCTTACAAATGTGAGCACTGCCCAGCTTCATTTGCTTGGAAGTCCGGTCTTAGAGTTCACGAGAAGCGTCACAAAGGCGAAAAGCCATTTATATGGCGTAAACGGGGAGAACACAATTGTCCCCAATGTTCTAAAATATTCAAGAAAGCTTGGGATTTAAAAGAACATTTACATATACACGATGGACTGAAGCCTTATAAATGCGAACACTGCTCGGCTTCCTTCGCTTGCAAATCAAATTTAAGAGCCCATGAGAAGCGCCATGATGGTGAACGACCCTTCATGTGCCAGTTTTGTTCAAATAGTTTTCTTTCCGCCAAGCAAAGAAGATTGCATGAACGTAGTCATACCGGCGAGCGACCTTTTGTTTGCGAATTCTGTGGTAAAAGTTTTTCTTCCTCGTCAGGCTTACAGAGCCATCGCAGTAGTCAGCATTTAAAGGAACGCAATTTTATCTGTGGCAAATGTGACAAACGCTTTAACAGACGTAGTCAATTAAGATTGCATCAAGCAAATATGCACACTGAAAAGCCGCGCACTCATGTTTGCACGATCTGTAAAGCGGCGTTTAAAGATATATGTGTTTTAAAATGTCACCTTACTATTCACAAAGAAAAAACTTATCAATGTTTAGAGTGTGGCAAAAAGTTTGCCAATAATTCCGTATTTAAGAGAACCTGGAATTTAAAGCAACATTTACCCATACATGACGCCATGAAGCCTTATAAATGCGAGCACTGCCCAGCTTCTTTTGTGTGGAAATCAGGTCTTAAAGTTCACGAGAAGCGCCATAAGGATGAAAAACCATTTATATGGCGTAAACGTGGGGAACACAACTGTCCCCAATGTTGTAAAGTATTCAAGAAAGCTTGGGATTTAAAAGAACATTTACATATACACAATGGACTGAAGCCATATAAATGCGGACATTGCTCGGCGTCGTTTGCTTGCAAATCGAATCTTAGAGCTCACGAAAAGCGCCATGATGGCGAAAGACCATTCGTGTGCCAGTTTTGTTCCAGTAGTTTTCCCTCCGCCAAGCAACAAAGATGTCATGAACGTAGTCATACCGGCGAGCGACCTTTTGTTTGCGAATTTTGTGGCAAAAGTTTTCCTTTCTCATCGGGCTTACAAAGTCATCGTAGTAGTCAGCATTTAAAAGAGCGAAATTTTATATGTGGGAAATGTGACAAACGTTTTAATAGACCAAGTCAGTTACGATTGCACCAGAAAAATATGCACACTGAAAAGCCGCGAACCCACGTCTGTACAATTTGCAAAGCAGCTTTCAAAGATATATATGTTTTAAAAGGTCATCTTACTATTCACAAGGACAAAACATATCAATGCTTAGAGTGTGGAAAAAAGTTTGCCAATAATTCCGGTTTATATTCGCATCGAAAAAGGCATGAAAAACAAAGAGACAGATTATTAGCAGATATTTTGGAGCAAGGAGGCTTAAAATGA
Protein Sequence: MGEFEELESNVNVSFQCIFCQKTFTKLDAFLEHFQSKHYKASTPVEEFCLLSDFEDVDEEKEILLTTEEDVNVSGKDEDSTSQLEFLLESAEGEMTSDHDSNILLPDENEKIAAHSKPQAENSKRGEHNCPHCCKVFKRTWDLKQHLHTHDGLKPYKCEHCPASFAWKSGLRVHEKRHKGEKPFIWRKRGEHNCPQCSKIFKKAWDLKEHLHIHDGLKPYKCEHCSASFACKSNLRAHEKRHDGERPFMCQFCSNSFLSAKQRRLHERSHTGERPFVCEFCGKSFSSSSGLQSHRSSQHLKERNFICGKCDKRFNRRSQLRLHQANMHTEKPRTHVCTICKAAFKDICVLKCHLTIHKEKTYQCLECGKKFANNSVFKRTWNLKQHLPIHDAMKPYKCEHCPASFVWKSGLKVHEKRHKDEKPFIWRKRGEHNCPQCCKVFKKAWDLKEHLHIHNGLKPYKCGHCSASFACKSNLRAHEKRHDGERPFVCQFCSSSFPSAKQQRCHERSHTGERPFVCEFCGKSFPFSSGLQSHRSSQHLKERNFICGKCDKRFNRPSQLRLHQKNMHTEKPRTHVCTICKAAFKDIYVLKGHLTIHKDKTYQCLECGKKFANNSGLYSHRKRHEKQRDRLLADILEQGGLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00746881;
90% Identity: iTF_00746881;
80% Identity: -