Gpal006546.1
Basic Information
- Insect
- Glossina pallidipes
- Gene Symbol
- F54F2.9
- Assembly
- GCA_000688715.1
- Location
- Scaffold77:1050762-1053045[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.77 9.1e+02 0.2 0.0 4 39 22 56 19 62 0.60 2 3 2.8e-08 3.4e-05 24.0 0.0 4 38 303 340 300 341 0.89 3 3 8.4e-11 1e-07 32.0 0.1 3 43 393 439 391 441 0.89
Sequence Information
- Coding Sequence
- atggggatgaaattttatgtgaatatttttGTTATATGTGCATTATTATTAAGCACTGAGGCCTGGGATACAGAGGAATTAGAAATTTTTGATTTAGTCGAAGAAATCAATAGAAATTTCTATGAATTTATGGGAATCATACAAAATGCTACCAGCAATGATGTTAAGCGAGCATTTAGATCTTTGTCGATTCAATTGCATCCAGACAAAAATCCATCAGAAGATGCAAACATACAATTCCGTAATCTAGTATCCATTTACGAGGTGCTTAAGGATCCGGGTAAAAGAGGAAAATATGATAAAGTATTAAGAGATGGTCTACCTAATTGGAAATCTGCTTTATACTATTACCGAAGAATGCGTAAAATTGGCTTGTATGAAGCCGCCGGTATATTGTTTGTGTTTTTGACAGTTGGTCAATACTTATTTGCATGGGCTGCTTACGTCGAGAAGAGATATACAGCTGAACAAATACTTGGCTCTAAATTAAAGAAATTGCAAAAGAAAAATAAAAGCATTGATATAGATATGATACTAAATGAAATTCCTACACCGTCGCTAAAGAATACATTACCTATACAAATACCTGTGTTTATTTGGAATATACCGaaaatgatgaaagaagcagctagcaaagctaaagagcttaaaaaattagctttagaaaaacaaaGACAAGAGATGGAAGAGGCTAAACGATTAGAAATATTAGAAAAAGAAGCTGAGGAACAAGCTCGACTACGTAAAGAGAAAAAGGAAAACTTACGTAAACGCAAAGAGAATCATAAAGTCCCTGAAAAAACTGATGAAGAGCTTAGGGGTTATTCTCAAATCCAAATTCGAGAATTAACCGAAGACGACGCAATACGGCCAGCCGCGCAAAAGACTGGTTTAACTGGCGGTTTTTGGACAGATGAAGATCTAGCCGAACTTATACGTTTAGTaaaaaaaTATCCATGCGGCTCTAGCAGTCGTTGGAACAGCATTGCCGAGGCAATGAACCGTACTGTACAAGAAGTTACCTTTATGGCAGCCAAAATGAAAGAGAACGGTTATCGTACGCCCGGTCAAGCGGAAAGTGCTGGCGATGCTAATTTCCAAGGAGCTCaaaaagagggaaaaagagataagtcaaaaaaagaaaaagccactaaaaaTATACTAATACCGGAGACAAATTGGACACAAGATCAGCAAAAAGCTCTGGAGGAAGCTATAATTAAATATCCAAAATCGAGTGTCGTGGGAGATCGTTGGCAACGGATTGCCGATTACGTGCCAGGTAAAAGTAAAGAAGAATGCTTAACACGTTACAAGTATCTGTGCGAACTGGTTAAAGCTCAAAAAAGGTCTGAAGGAGAAGATAGTGTTGATGAAAATTCTAAGAATTGTGAAAGAAGGCAGAACTCGACAATTTGTCATTCAAATGAAAATTCTCTTATTCAATATTATCAAGAAGCTCAGTCAGTAGCGGACGAAATTAACGAATTAGGCGATAAGAAGCGTACCAAACGCAAGGACCACAGAAAAAAGCGAGACTTAGTGAGTACCCAAAAGTCGGATGAAGCAAGTGCTTATTAA
- Protein Sequence
- MGMKFYVNIFVICALLLSTEAWDTEELEIFDLVEEINRNFYEFMGIIQNATSNDVKRAFRSLSIQLHPDKNPSEDANIQFRNLVSIYEVLKDPGKRGKYDKVLRDGLPNWKSALYYYRRMRKIGLYEAAGILFVFLTVGQYLFAWAAYVEKRYTAEQILGSKLKKLQKKNKSIDIDMILNEIPTPSLKNTLPIQIPVFIWNIPKMMKEAASKAKELKKLALEKQRQEMEEAKRLEILEKEAEEQARLRKEKKENLRKRKENHKVPEKTDEELRGYSQIQIRELTEDDAIRPAAQKTGLTGGFWTDEDLAELIRLVKKYPCGSSSRWNSIAEAMNRTVQEVTFMAAKMKENGYRTPGQAESAGDANFQGAQKEGKRDKSKKEKATKNILIPETNWTQDQQKALEEAIIKYPKSSVVGDRWQRIADYVPGKSKEECLTRYKYLCELVKAQKRSEGEDSVDENSKNCERRQNSTICHSNENSLIQYYQEAQSVADEINELGDKKRTKRKDHRKKRDLVSTQKSDEASAY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00747398; iTF_00748907; iTF_00746641; iTF_00748152; iTF_00750393;
- 90% Identity
- iTF_00747398;
- 80% Identity
- -