Basic Information

Gene Symbol
F54F2.9
Assembly
None
Location
scf7180000640123:34056-38309[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.6 1.2e+03 -0.8 0.0 3 12 19 28 17 58 0.71
2 3 2.9e-08 2.2e-05 23.9 0.0 4 38 301 338 298 339 0.89
3 3 5.3e-11 4.1e-08 32.7 0.1 3 43 391 437 389 439 0.86

Sequence Information

Coding Sequence
atgaaattttatgtgaatatttttGTTATATGTGCATTATTATTAAGCACTGAGGCCTGGGATACAGAGGAATTAGAAATTTTTGATTTAGTCGAAGAAATCAATAGAAATTTCTATGAATTTATGGGAATCACACAAAATGCTACCAGCAATGATGTTAAGCGAGCATTTAGATCTTTATCGATTCAACTGCATCCAGACAAAAATCCATCAGAAGATGCAAACATACAATTCCGTAATTTAGTATCCATTTACGAGGTGCTTAAGGATCCGGGTAAAAGAGGAAAATATGATAAAGTATTAAGAGATGGTCTACCTAATTGGAAATCTGCTTTATACTATTACCGAAGAATGCGTAAAATTGGCTTGTATGAAGCCGCCGGTATATTGTTTGTGTTTTTGACAGTTGGTCAATACTTATTTGCATGGGCTGCTTACGTCGAGAAGAGATATACAGCTGAACAAATACTGGGCTCTAAATTAAAGAAATTGCAAAAGAAAAATAAAAGCATTGATATAGATATGATACTAAATGAAATTCCTACACCGTCGCTAAAGAATACATTACCTATACAAATACCTGTGTTTATTTGGAATATACCGAAAATGGTGAAAGAAGCAGCTAGCAAAGCTAAAGAGCTTAAAAAATTAGCTGTAGAAAAACAAAGACAAGAGATGGAAGAGGCTAAACGATTAGAAATATTAGAAAAAGAAGCTGAGGAACAAGCTCGACTACGTAAGGAGAAAAAGGAAAACTTACGTAAACGCAAAGAGAATCATAAAGTTCCTGAAAAAACTGATGAAGAGCTTAGGGGTTATTCTCAAATCCAAATTCGAGAATTAACCGAAGATGACGCAATACGGCCAGCCGCACAAAAGACTGGTTTAACTGGCGGTTTTTGGACAGATGAAGATCTTGCCGAACTTATACGCTTAGTaaaaaaaTATCCATGCGGCTCTAGCAGTCGTTGGAACAGCATCGCCGAGGCAATGAACCGTACTATACAAGAAGTTACCTTTATGGCAGCCAAAATGAAAGAGAACGGTTATCGTACTCCTGGTCAAGCGGAAAGTGCTGGCGTTGCTAATTTCCAAGGAGCTCaaaaagagggaaaaagagataaatcaaaaaaagaaaaagccactaaaaaTATACTAATACCGGAGACAAATTGGACACAAGATCAGCAAAAAGCTTTGGAGGAAGCTATAATTAAATATCCAAAATCCAGTGTTCTGGGAGATCGTTGGCAACGGATTGCCGATTACGTGCCTGGTAAAAGTAAAGAAGAATGCTTAACACGTTACAAGTATCTGTGCGAACTGGTTAAAGCTCAAAAAAGATCTGAAGGAGAAGATAGTGTTGATGAAAATTCTAAGAATTGTGAAAGAAGGCAGAACTCGACAATTTGTCATTCAAATGAAAATTCTCTAATTCAATATTATCAAGAAGCTCAGTCAGTAGCGGACGAAATTAACGAATTAGGCGATAAAAAGCGTACCAAACGCAAGGACCACAGAAAAAAGCGAGACTTAGCGAGTACCCAAAAGTCGGATGAAGCAAGTGCTTATTAA
Protein Sequence
MKFYVNIFVICALLLSTEAWDTEELEIFDLVEEINRNFYEFMGITQNATSNDVKRAFRSLSIQLHPDKNPSEDANIQFRNLVSIYEVLKDPGKRGKYDKVLRDGLPNWKSALYYYRRMRKIGLYEAAGILFVFLTVGQYLFAWAAYVEKRYTAEQILGSKLKKLQKKNKSIDIDMILNEIPTPSLKNTLPIQIPVFIWNIPKMVKEAASKAKELKKLAVEKQRQEMEEAKRLEILEKEAEEQARLRKEKKENLRKRKENHKVPEKTDEELRGYSQIQIRELTEDDAIRPAAQKTGLTGGFWTDEDLAELIRLVKKYPCGSSSRWNSIAEAMNRTIQEVTFMAAKMKENGYRTPGQAESAGVANFQGAQKEGKRDKSKKEKATKNILIPETNWTQDQQKALEEAIIKYPKSSVLGDRWQRIADYVPGKSKEECLTRYKYLCELVKAQKRSEGEDSVDENSKNCERRQNSTICHSNENSLIQYYQEAQSVADEINELGDKKRTKRKDHRKKRDLASTQKSDEASAY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00749622;
90% Identity
iTF_00747398;
80% Identity
-