Gpal001019.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Glossina pallidipes
Gene Symbol
dl
Assembly
GCA_000688715.1
Location
Scaffold237:138221-152980[+]

Transcription Factor Domain

TF Family
RHD
Domain
RHD domain
PFAM
PF00554
TF Group
Beta-Scaffold Factors
Description
Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.7e-69 3.2e-66 222.6 0.0 1 168 74 241 74 242 0.98
2 2 0.91 1.7e+03 -1.1 0.1 84 129 689 734 667 742 0.75

Sequence Information

Coding Sequence
ATGGAGCGGAATGATGCTGTTGTTGATATACTTAAGACTTTAGATAACAACAGTCCAGAACTTAATGAGAATCCAGCATTTCTGGAAGTACAAGCAATTACAAATGCAACGTCGGTTTCCTCGTCGGGATCGTCATCGCCAACATTTAATCAAAAATGCCAGAAATCAACGAACATTTTAAGGCACGAAAATTCATACACAGCATCAGAGAAGCCTTATATACGCATTGTTGAGCAACCTGCTAATAAGGCTCTCCGATTTCGCTATGAGTGCGAAGGGCGTTCTGCAGGTTCTATACCCGGCGCTAATTCGACAACCGAAAATAAAACATTTCCCACCATTGAAATCGCTGGATATAAAGGTGAAGTGACAATAGTCGTCTCCTGCGTTACAAAAGATGCGCCGTACAGGCCGCATCCTCATAATTTGGTTGGCAAAGAGGGCTGTGAATATGGTATTTGTACAATGCGTGTAAAGGGTGACCCTCCAAGAGCAGTATTTAGCAATTTAGGTGTACAGTGTGTAAGGAAGAAGGATATCAAAGCGGCTTTAGAATTACGCGAAAATCGCAATGTCGACCCGTTTAAAACAAAATTTGCCCACAAAGATCAGCCCTCGAGCATTGATTTGAATGTCGTACGTCTATGTTTTCAAGCATTTATACTATCTGGCCCACGGCAGTACAAAAAATTGACGCCTGTAGTATCCGATCCCGTTTACGATCGAAAAGCTGTAAGCGACCTGGCTATTAATCGCTTATGCAGCTGCTCGGCCAAAATGAGCGGTGGTGATGAAATAATAATGCTTTGCGAAAAGGTTCCCAAGGATATTAAAATTAAATTTTATGAATTAAGTAAAGAAGGAACCATAGTTTGGGAAGATTATGCCGTTTTTCAACACACCGACATTCATAAGCATACAGCGATTGCATTTAAGACGCCACGTTATCATAATCCAGAAGCAATTCATAGACCTCAAGTTTACATCCAATTAGTGCGACCATCAGATGGAGCTACTAGCGAGCCTTTACCATTCGAATATTATTCCGATCCAGGTACGTCCTTCTTTATGCGTTTACAGCGTAAACGTGAACTACAAGAGAATCTTAAGGTATTTCAGCAAATAATGTCTCTTGACGGTGAAAAAACGAAGCAAATAAACGAGAATGCAATAAACGACATGATTATATGTAGAGATTCTGTTAGAGATTCTCTGCACGCGAGCGAAAAGCCTTTTAAACCTTCTTATGTATGTATAGAAAAATGTGATGTTAATCGAAAAACACCTAATGAACGAGTCGAGTTGCAAATGCAAAAACTTTTCTTCCCACTTACGAATAACTTAACGCATAGCAAACCAGACTTAGACGACAAACTTTTAGGTCTCAGAGAAGTGGAAGAATCTATAGATCTTTCCACAATGAAAGAGATCACTGCTTGGATGCACTCCAACGACCTTGAGTGTAACTTAGTTATAGGAACTAATGGCTCAATTCAAGATAATGACGGCATCATAATGAATAGAAATCATATAAAAACATTGCGCAAATTTAATGACAATATTGATATAAGTCCACTGATCGGGCAACCTAAGGCCGAAAATTATTTCAGCTTTTCTGATGATCACGATGCCGAAAACAACGAGACAAATGTTGCAAATAATATCACTTGCATTGACGACAGTAGTAAAGATGACAGTTTTGACGAAACCTCCACGCATAATAGCTTTGAATTAGCTTTAAAAAACCCCATCGAAATGCCAACCCAATCGATTGGTTTTCAATCTCTACAAGAATCCCTTGTTACTTTTAACCCATCGACCCCGACAATCCAAGTGGATACTGTAGAAACCTCTGAGACTACACCTCCTACGTGCTCAAATTTACGTACATCATCTAACACGGTATTAAAAATTTCAGACCAAGTATTGCCTGCTTTGCCTCCTAAACCAACTCAAGAAATTTATAGGAAAACTAACAGTAATTCCCCCAGTTCTCACATAGCACAAAGCAGTCGCAATGGAAGTTGTTCTTCACTTACAATTTCACAAACAACTGCATTGTCAATTTCAGATCAGGATTCAAATAAACATTCGTCTACCATGAGTATGCCCTCGAGaaaaaaaaaGAATTTTTTCTCTCGTTTATTCTCGCGCAAAAAGAAGAATCAAACCGATGTCCAAGCACATAAAGAAGAATCAAACTGCAAATTAAGAGTCCCAGCTAACAATTCAGACAATaaaaaaaTCTATTTTTCATTAGGAGATAGCAAACGCACCTCATTGCGTTCCATTAAATCTTTGCAATTAGATATGATGAGCTATGAATTTGATAGaaaaaaaTCGAACAGTGAAAGACTACCCGGCCGAGGTGTAAACAATGTTTCAGTCCGAGGAGAAGGCAGCCGAGAAATTGAAACACAAAAAGTGTCATTAGAAAATAATCCATTTAATAAGAATCTCAAATCCGTTGACAGTCTGGAACGTCTTGAAGGTTTGGTTGATCACAAAACCCTTAACGCCCTACAACTAGCTAATGTCCCTTTATCCGACGGTGACATGGAGCTTGTAGCTATCGCCGATAGGCAAAGTATCAAAAATCTTTGTGACGGTAGCTACGGCGTTCTTCTTCATCCTAAAGTTGATTTAACTGAAGCTGAACACTTCGCCCTCTACACTAATATACCGCTTGCTTTTGAAAGTGAAGAAAATACTGAAGAATTCGATCAATGCCAAATATTAACACCGGCAGAAGTTGCCAGGCGTTTGACTTCAGCCAACACTACAAAATAG
Protein Sequence
MERNDAVVDILKTLDNNSPELNENPAFLEVQAITNATSVSSSGSSSPTFNQKCQKSTNILRHENSYTASEKPYIRIVEQPANKALRFRYECEGRSAGSIPGANSTTENKTFPTIEIAGYKGEVTIVVSCVTKDAPYRPHPHNLVGKEGCEYGICTMRVKGDPPRAVFSNLGVQCVRKKDIKAALELRENRNVDPFKTKFAHKDQPSSIDLNVVRLCFQAFILSGPRQYKKLTPVVSDPVYDRKAVSDLAINRLCSCSAKMSGGDEIIMLCEKVPKDIKIKFYELSKEGTIVWEDYAVFQHTDIHKHTAIAFKTPRYHNPEAIHRPQVYIQLVRPSDGATSEPLPFEYYSDPGTSFFMRLQRKRELQENLKVFQQIMSLDGEKTKQINENAINDMIICRDSVRDSLHASEKPFKPSYVCIEKCDVNRKTPNERVELQMQKLFFPLTNNLTHSKPDLDDKLLGLREVEESIDLSTMKEITAWMHSNDLECNLVIGTNGSIQDNDGIIMNRNHIKTLRKFNDNIDISPLIGQPKAENYFSFSDDHDAENNETNVANNITCIDDSSKDDSFDETSTHNSFELALKNPIEMPTQSIGFQSLQESLVTFNPSTPTIQVDTVETSETTPPTCSNLRTSSNTVLKISDQVLPALPPKPTQEIYRKTNSNSPSSHIAQSSRNGSCSSLTISQTTALSISDQDSNKHSSTMSMPSRKKKNFFSRLFSRKKKNQTDVQAHKEESNCKLRVPANNSDNKKIYFSLGDSKRTSLRSIKSLQLDMMSYEFDRKKSNSERLPGRGVNNVSVRGEGSREIETQKVSLENNPFNKNLKSVDSLERLEGLVDHKTLNALQLANVPLSDGDMELVAIADRQSIKNLCDGSYGVLLHPKVDLTEAEHFALYTNIPLAFESEENTEEFDQCQILTPAEVARRLTSANTTK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-