Basic Information

Insect: Glossina morsitans
Gene Symbol: -
Assembly: None
Location: scf7180000648221:147118-161280[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.00024 0.013 15.4 3.5 1 23 312 335 312 335 0.98

2 9 0.00018 0.0099 15.8 0.5 1 23 342 365 342 365 0.96

3 9 0.0017 0.094 12.7 0.7 1 23 372 397 372 397 0.96

4 9 1.8e-07 9.5e-06 25.3 1.9 1 23 406 429 406 429 0.98

5 9 0.013 0.73 9.9 3.7 1 23 445 468 445 468 0.94

6 9 0.00054 0.03 14.3 0.3 1 23 474 496 474 496 0.98

7 9 1.6e-05 0.00089 19.1 0.2 2 23 504 526 503 526 0.93

8 9 0.00087 0.048 13.6 5.5 1 23 532 554 532 554 0.96

9 9 3.7e-07 2e-05 24.3 3.2 1 23 560 582 560 582 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.00024	0.013	15.4	3.5	1	23	312	335	312	335	0.98
2	9	0.00018	0.0099	15.8	0.5	1	23	342	365	342	365	0.96
3	9	0.0017	0.094	12.7	0.7	1	23	372	397	372	397	0.96
4	9	1.8e-07	9.5e-06	25.3	1.9	1	23	406	429	406	429	0.98
5	9	0.013	0.73	9.9	3.7	1	23	445	468	445	468	0.94
6	9	0.00054	0.03	14.3	0.3	1	23	474	496	474	496	0.98
7	9	1.6e-05	0.00089	19.1	0.2	2	23	504	526	503	526	0.93
8	9	0.00087	0.048	13.6	5.5	1	23	532	554	532	554	0.96
9	9	3.7e-07	2e-05	24.3	3.2	1	23	560	582	560	582	0.99

Sequence Information

Coding Sequence: ATGGCCACCAAGAGTTTGACCAAAGAAAGTGCTAAAGACCATTGCCGTATTTGTTTGCGTTTTCTAATTGCTTGCAAGAACACTGACAGTACAATTAGAGTAGATGACGAGGTTATGCTGAAAAATAAACAAATTTTCATTGACATGAATACAAATCGCGATCTACAGATATTTATAACTAAATTGCTCAATATGGAAGGAATTGAATATCCGTACCTTGATTTGGAATATCCGCAAAAAATGTGCTTTGATTGTTTTGATAAATTGCAAAGCTTTGAAAGGTTTTATTTGAAAGCGGTCAAGAGCGCAGAGAGGCTGCATCTTTTGTTCAAAAATAGTGGCAGCACAACAGAATGCAATAGTATGATAGTTAAAACAGAAGATGATTGCAATAATAAAAGGAATACATATATCGTTGATTCAAATGAAAGGCCTAATGAAATGTACAATTTATTGGATGGTTTAATGGAAACTGAATCCATACTGTTAAACTCAGAGACCTTGGAGAAAAACAATGTAAGCGCTGCAGTAGATCCCGATCCCTTTGAGCAGAGTTCCATAGAGCAGCGACAAACCAGAAGTAAAGCGAAGAAAAAGAAATTGGAATCAATAAAACCCGTAATTGAATCCGAGAACAGTGAAGAATTTGATTGGCTTCAAAAGAGTAATACGTTCTCTGATGGCGACGAAGTTCTGAGGAAGCCAATTGCTCAAAGCGATAAAGCTGAAGAAGAGTTGATCCAAGCAGAGATAGAAAAGGACGATATAAAAACTGAAGAAGATTTCGGTAAAGATTCCGATTTTgaaaccgaaaatataccaaagaaagcgcgacgaaaacgaagaacaaaaaaggaaatggaagaacTACGAAGATCTCAAAATAACGCTGTTAAGCGACCGCCTAGACGTGTTAAGGGCTTAAAGAACATTTACAAATGTCAACAGTGTAATCATAGTTTCGCTCACAAAATCACGTTGGACGCTCATGTGCGTAAGATACACGAGGGCCAAAAGCAACCGTTTAAATGTGATCGCTGCGATAAAGCCTACACATTTGCGGGTGGTCTTTATACGCATATTAAGGAATACCACGAAAACGAAAGTCGTGCATTTAGATGTGATTATCCTGATTGCGATCGTGTATATACCGCTTATATAACCTTGCAACGACACAAACGTCTAAAACATAGCGATACACCGCCTGAAAACCTTTATGTGTGCGAACACTGCGGTGCAACATTCAATCAATCCGCCAATCTAAAATACCACATGAAAACTCGACATCCCACCGAAGAACAATTGGCCGCTAAAGCTCAAATTAAGGAACGTTTTGAGTGTGATGTGTGCCAGAAGCTGTTCCATTCCCGTTATACATTAAAATATCATAAACTGCAGTTGCATTCAACCGACATGAATTATGAGTGCAAAGTATGCGGACGTCGTATGGCTAAAAAATTTATGCTGGTTCAACACATGCTTGTCCATTCCGACGATACAGAGAAAATGCCCTGCGAAATGTGTGGCAAAAAATTTATACGCAAATTCGAATTGGAATCCCATGTAAAGGCAGTTCATATGAAACTGAAGCCTTTCGAATGCCAGTATTGCTCAGAGTGTTTCGCTACTCGGAAAACTCTACGCCATCACGAGTATATACATACCGGAGAGAAACCGTACGTATGCAATATATGTGGCCAAGCATTTCGACAACAAACTTGCTTAAAAAATCATCGTAGAACGCATGAGAAAATCGGTGGCACAGAAAATTTGTATACTAGCAACCTAAATCGTAGCTTTCTAAGTAATCTGGCACAGCAACCTTCTCCATCCGCCTCTAGTGCTTCAATTTTAAAAGGTAGTTTGACCTGA
Protein Sequence: MATKSLTKESAKDHCRICLRFLIACKNTDSTIRVDDEVMLKNKQIFIDMNTNRDLQIFITKLLNMEGIEYPYLDLEYPQKMCFDCFDKLQSFERFYLKAVKSAERLHLLFKNSGSTTECNSMIVKTEDDCNNKRNTYIVDSNERPNEMYNLLDGLMETESILLNSETLEKNNVSAAVDPDPFEQSSIEQRQTRSKAKKKKLESIKPVIESENSEEFDWLQKSNTFSDGDEVLRKPIAQSDKAEEELIQAEIEKDDIKTEEDFGKDSDFETENIPKKARRKRRTKKEMEELRRSQNNAVKRPPRRVKGLKNIYKCQQCNHSFAHKITLDAHVRKIHEGQKQPFKCDRCDKAYTFAGGLYTHIKEYHENESRAFRCDYPDCDRVYTAYITLQRHKRLKHSDTPPENLYVCEHCGATFNQSANLKYHMKTRHPTEEQLAAKAQIKERFECDVCQKLFHSRYTLKYHKLQLHSTDMNYECKVCGRRMAKKFMLVQHMLVHSDDTEKMPCEMCGKKFIRKFELESHVKAVHMKLKPFECQYCSECFATRKTLRHHEYIHTGEKPYVCNICGQAFRQQTCLKNHRRTHEKIGGTENLYTSNLNRSFLSNLAQQPSPSASSASILKGSLT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00749893;
90% Identity: iTF_00749893;
80% Identity: iTF_00749115;