Gmor007431.1
Basic Information
- Insect
- Glossina morsitans
- Gene Symbol
- -
- Assembly
- None
- Location
- scf7180000648221:147118-161280[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 2.3 3.6e+03 -2.4 0.1 18 22 14 18 6 22 0.76 2 9 1.8 2.7e+03 -2.1 0.8 15 29 310 324 303 336 0.70 3 9 0.33 5e+02 0.3 0.4 12 43 337 365 329 366 0.69 4 9 5e-08 7.8e-05 22.1 0.8 5 44 396 430 393 430 0.91 5 9 1.9 3e+03 -2.2 0.1 16 28 444 456 439 470 0.77 6 9 0.27 4.2e+02 0.5 0.6 13 28 470 485 459 496 0.76 7 9 0.011 17 5.0 0.3 6 29 492 515 487 528 0.79 8 9 0.12 1.8e+02 1.7 2.5 5 38 520 550 516 551 0.82 9 9 0.037 57 3.3 4.6 14 38 557 578 546 583 0.80
Sequence Information
- Coding Sequence
- ATGGCCACCAAGAGTTTGACCAAAGAAAGTGCTAAAGACCATTGCCGTATTTGTTTGCGTTTTCTAATTGCTTGCAAGAACACTGACAGTACAATTAGAGTAGATGACGAGGTTATGCTGAAAAATAAACAAATTTTCATTGACATGAATACAAATCGCGATCTACAGATATTTATAACTAAATTGCTCAATATGGAAGGAATTGAATATCCGTACCTTGATTTGGAATATCCGCAAAAAATGTGCTTTGATTGTTTTGATAAATTGCAAAGCTTTGAAAGGTTTTATTTGAAAGCGGTCAAGAGCGCAGAGAGGCTGCATCTTTTGTTCAAAAATAGTGGCAGCACAACAGAATGCAATAGTATGATAGTTAAAACAGAAGATGATTGCAATAATAAAAGGAATACATATATCGTTGATTCAAATGAAAGGCCTAATGAAATGTACAATTTATTGGATGGTTTAATGGAAACTGAATCCATACTGTTAAACTCAGAGACCTTGGAGAAAAACAATGTAAGCGCTGCAGTAGATCCCGATCCCTTTGAGCAGAGTTCCATAGAGCAGCGACAAACCAGAAGTAAAGCGAAGAAAAAGAAATTGGAATCAATAAAACCCGTAATTGAATCCGAGAACAGTGAAGAATTTGATTGGCTTCAAAAGAGTAATACGTTCTCTGATGGCGACGAAGTTCTGAGGAAGCCAATTGCTCAAAGCGATAAAGCTGAAGAAGAGTTGATCCAAGCAGAGATAGAAAAGGACGATATAAAAACTGAAGAAGATTTCGGTAAAGATTCCGATTTTgaaaccgaaaatataccaaagaaagcgcgacgaaaacgaagaacaaaaaaggaaatggaagaacTACGAAGATCTCAAAATAACGCTGTTAAGCGACCGCCTAGACGTGTTAAGGGCTTAAAGAACATTTACAAATGTCAACAGTGTAATCATAGTTTCGCTCACAAAATCACGTTGGACGCTCATGTGCGTAAGATACACGAGGGCCAAAAGCAACCGTTTAAATGTGATCGCTGCGATAAAGCCTACACATTTGCGGGTGGTCTTTATACGCATATTAAGGAATACCACGAAAACGAAAGTCGTGCATTTAGATGTGATTATCCTGATTGCGATCGTGTATATACCGCTTATATAACCTTGCAACGACACAAACGTCTAAAACATAGCGATACACCGCCTGAAAACCTTTATGTGTGCGAACACTGCGGTGCAACATTCAATCAATCCGCCAATCTAAAATACCACATGAAAACTCGACATCCCACCGAAGAACAATTGGCCGCTAAAGCTCAAATTAAGGAACGTTTTGAGTGTGATGTGTGCCAGAAGCTGTTCCATTCCCGTTATACATTAAAATATCATAAACTGCAGTTGCATTCAACCGACATGAATTATGAGTGCAAAGTATGCGGACGTCGTATGGCTAAAAAATTTATGCTGGTTCAACACATGCTTGTCCATTCCGACGATACAGAGAAAATGCCCTGCGAAATGTGTGGCAAAAAATTTATACGCAAATTCGAATTGGAATCCCATGTAAAGGCAGTTCATATGAAACTGAAGCCTTTCGAATGCCAGTATTGCTCAGAGTGTTTCGCTACTCGGAAAACTCTACGCCATCACGAGTATATACATACCGGAGAGAAACCGTACGTATGCAATATATGTGGCCAAGCATTTCGACAACAAACTTGCTTAAAAAATCATCGTAGAACGCATGAGAAAATCGGTGGCACAGAAAATTTGTATACTAGCAACCTAAATCGTAGCTTTCTAAGTAATCTGGCACAGCAACCTTCTCCATCCGCCTCTAGTGCTTCAATTTTAAAAGGTAGTTTGACCTGA
- Protein Sequence
- MATKSLTKESAKDHCRICLRFLIACKNTDSTIRVDDEVMLKNKQIFIDMNTNRDLQIFITKLLNMEGIEYPYLDLEYPQKMCFDCFDKLQSFERFYLKAVKSAERLHLLFKNSGSTTECNSMIVKTEDDCNNKRNTYIVDSNERPNEMYNLLDGLMETESILLNSETLEKNNVSAAVDPDPFEQSSIEQRQTRSKAKKKKLESIKPVIESENSEEFDWLQKSNTFSDGDEVLRKPIAQSDKAEEELIQAEIEKDDIKTEEDFGKDSDFETENIPKKARRKRRTKKEMEELRRSQNNAVKRPPRRVKGLKNIYKCQQCNHSFAHKITLDAHVRKIHEGQKQPFKCDRCDKAYTFAGGLYTHIKEYHENESRAFRCDYPDCDRVYTAYITLQRHKRLKHSDTPPENLYVCEHCGATFNQSANLKYHMKTRHPTEEQLAAKAQIKERFECDVCQKLFHSRYTLKYHKLQLHSTDMNYECKVCGRRMAKKFMLVQHMLVHSDDTEKMPCEMCGKKFIRKFELESHVKAVHMKLKPFECQYCSECFATRKTLRHHEYIHTGEKPYVCNICGQAFRQQTCLKNHRRTHEKIGGTENLYTSNLNRSFLSNLAQQPSPSASSASILKGSLT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00749893;
- 90% Identity
- iTF_00749893;
- 80% Identity
- iTF_00749158;