Basic Information

Insect: Glossina morsitans
Gene Symbol: -
Assembly: None
Location: scf7180000651846:601723-607200[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 1.3 69 3.7 0.2 2 23 32 54 31 54 0.88

2 19 0.033 1.8 8.7 6.2 2 23 164 189 163 189 0.90

3 19 2.1e-05 0.0011 18.7 1.0 1 23 271 294 271 294 0.97

4 19 1.3 73 3.6 0.4 5 19 312 326 309 327 0.90

5 19 0.28 15 5.8 5.3 1 23 334 356 334 356 0.94

6 19 0.00017 0.009 15.9 2.6 1 23 362 386 362 386 0.95

7 19 0.0081 0.44 10.6 1.7 1 23 392 416 392 416 0.96

8 19 7.1e-05 0.0039 17.1 1.3 1 23 422 444 422 444 0.98

9 19 0.29 16 5.7 0.2 2 23 481 503 480 503 0.90

10 19 3.1e-05 0.0017 18.2 1.4 1 23 609 632 609 632 0.95

11 19 0.00023 0.013 15.4 0.1 1 23 713 736 713 736 0.97

12 19 0.31 17 5.6 0.5 2 19 751 768 750 773 0.92

13 19 0.067 3.7 7.7 7.5 1 23 776 798 776 798 0.97

14 19 5e-05 0.0027 17.6 0.8 1 23 804 828 804 828 0.96

15 19 0.00019 0.01 15.7 2.3 1 23 834 858 834 858 0.98

16 19 9.7e-06 0.00053 19.8 1.7 1 23 864 886 864 886 0.98

17 19 4.9e-06 0.00027 20.7 0.3 1 23 892 914 892 914 0.97

18 19 0.014 0.77 9.8 3.3 1 23 920 942 920 942 0.91

19 19 0.0001 0.0057 16.5 0.1 1 23 948 970 948 970 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	1.3	69	3.7	0.2	2	23	32	54	31	54	0.88
2	19	0.033	1.8	8.7	6.2	2	23	164	189	163	189	0.90
3	19	2.1e-05	0.0011	18.7	1.0	1	23	271	294	271	294	0.97
4	19	1.3	73	3.6	0.4	5	19	312	326	309	327	0.90
5	19	0.28	15	5.8	5.3	1	23	334	356	334	356	0.94
6	19	0.00017	0.009	15.9	2.6	1	23	362	386	362	386	0.95
7	19	0.0081	0.44	10.6	1.7	1	23	392	416	392	416	0.96
8	19	7.1e-05	0.0039	17.1	1.3	1	23	422	444	422	444	0.98
9	19	0.29	16	5.7	0.2	2	23	481	503	480	503	0.90
10	19	3.1e-05	0.0017	18.2	1.4	1	23	609	632	609	632	0.95
11	19	0.00023	0.013	15.4	0.1	1	23	713	736	713	736	0.97
12	19	0.31	17	5.6	0.5	2	19	751	768	750	773	0.92
13	19	0.067	3.7	7.7	7.5	1	23	776	798	776	798	0.97
14	19	5e-05	0.0027	17.6	0.8	1	23	804	828	804	828	0.96
15	19	0.00019	0.01	15.7	2.3	1	23	834	858	834	858	0.98
16	19	9.7e-06	0.00053	19.8	1.7	1	23	864	886	864	886	0.98
17	19	4.9e-06	0.00027	20.7	0.3	1	23	892	914	892	914	0.97
18	19	0.014	0.77	9.8	3.3	1	23	920	942	920	942	0.91
19	19	0.0001	0.0057	16.5	0.1	1	23	948	970	948	970	0.99

Sequence Information

Coding Sequence: ATGTTAAAAACTTTACCGATAATTAAATTCAATGATGTTTCTAAAGAGAAATGTGGTGAGATTTTCTGCCACCGTCCTAAGGAATTTACAATATATTGTACACTTTGCGACATGAAGTCCTTTGATTTTACTGATTTTTTAATTCATATTGAAAATGTGCACTTTAATACCGATTTATTGAAATTGGAAAATCCTAGCATGGGTTATGCGGATTTGTTTGGAATGAACGTTAAAAAGGAGAACGTCTTTGCAGAACACGAAGCTTCAATGGAAGAGATATGCTGCGACAATAGGTCAGATATATTAAATGGCAGCAGTCGTGTTGAAAGTGGAAATGAAGATAGTGAAGAAGTGTTAACTGTATTAAAGAGAACTAAAGGGAGATCAAGAGTAACAAGCAGTAAAAGGAAACATAATAAAGCTAAAGCGAATTGCAACCATCCAGATGCCGATAAAAATAGTAAGTCAGCGAATACGACGAAGGGCTTAAAGTGTCATCAATGCATTCATTGTAGTAAAACTTTCGTTAACTGTGGCCTGCTAAAAATTCACGTCGCTAGAGTTCACAAAAATTTAGCTAAAGATAAGGAGAGTGATGCCAGCATAAAAGTGATAAATAAAGAAAAACCTGTGGATGATCAAGTCTTTGGACACCAGAAACTATTAGACGAGTCAGTGATTGCTGAAAATACGAATGAAAAGTATAATAAAGATGTTGAAAATATTAATTCAGAGGAGCGTGATGATAACCAGGCTTCAGATGCTGATTATGAACCCGACTTAGACAATACTGTCGATAACAAGAAGAGCTTTCAATGCGAAGATTGCGACAAAACTTTAAGTAGTTGCGCTTCTCTAAGAGTACACATTGCTAGATATCACGAGACAAAGAGTAAAAAACCAAAGGATTCGGACAATGGAATGCCATGCATTGAATGCGAGGAGGTGTTCACCAATCAAAAACTTTACGATCGTCATTGCGTTGAAGTACACGACGGTTTCAAATGTTCCTTGTGTGAGAAAAGGTTCAAAATACGTTATAGCTGTAAACGTCATGAACTGCTGCATAATAAGATAAAAGAATTCATTTGCTCCTTTGAAGGTTGCAATAAAAGTTTCACGGAACATTATTACCTAAAGCGTCACCAAGACGTACATCAAACTGAACGTAACTTTATATGTAATTTTGAAAATTGTGGTAAGGCATTCCATGCGAAACGTCGTTTATGGCAACATCAGAAAATACATACTAAGCCGAAAAATTTTATTTGCGATATGTGCGGCTATAGTTGCCGCGAAAGAGTCACATTACGCGTCCATCAACGCATACATACGGTCAGTAAAGCTATGTTGAAGACTTTACCAACAATAAAATTTAATGAAGCTCCTAAAGCGAAATGTGGTGAGATTTTCTGCCACAGTTCCAGGGACTTTACAATATATTGCACACTCTGCGACATGAAATCTTTTGATTTTTCCGATTTTATAATGCATATTGAGAATGTACACTTCGATGGTGATTTGTTAAGGTTGGAAGCTTCAAAAATAGATTATTCGCAATTTTTGGAATTGAATGTTAAAGATGAAAACAGCTGTCCCGAACAAGAAGTTTCAGTTGATGAAATGTCCTGGGAGGATATGCCAGACATTTTGAATAGGAGTAGCAGTACAGAAAGTAGTAAAGAAGATGTTGAAGAAGTCTTGACGGTTCTAAAGAGAAATAGGGGAAAAACAAAGGAAAGCAATAATAAAAAAGCACGCCATAGCCAGGGCAGCCTGGGCAGGGGTAGTAAGGAAACAAATGCAGCAGAGATGTTGAAATGCCATCAATGCGAGCATTGTAATAAGATTTTCGTTAATCCTGGTCTATTGAAAATACACAAAGCGAGGATTCATAAAACGTTTGTAAATGAAAAGAAAAACGACAGGGAGTCAGAAGATATACTCGCTGAAGACCGTGCTGATGGCAGAATGCCTGAAAATGTGGAGACGTTAGGAGAATTAACGGTCACAAAAGATACATTTAAAAAGTACAATAAATATGCAAACATCGTTATATCAGAAGGCGATGAAAGTCAGGATTCAGATGAGAACTATGAACCTGAGTCAGAAAATAAGACCAACAATAAGAAGAGTTATCAATGCGAAAACTGCGGTAGAAACTTAAGTAGCGTTGGTTCTCTAAAATCGCACATTGCTAGATTGCATAAAACAAGCAATAAAAAGCCAAAAGAATTGGATATCGAAACTCCATGTGCCGAATGTAATGAAATATTCGAAAATCAAAAGCTATACGATCGCCACTGCATTGACGTGCACGACGGCTTTAAATGCTCCATGTGTGACAAAAGATTCAAACTACGCCATCAGTGTAAACGCCACGAATTAATACATAAAGAGGCGAAACAGTTTGTTTGCTCCTTTGAGGGTTGCAATAAAGGTTTTACGGAGCAGTATTACCTGAAAAGACATCAAGATATACATCAAACTGAACGTAACTTCAAATGTGATTTTGAGAATTGCGGCAAAGCATTTCATACGAAGCGTCGCTTATGGGCCCATCAGAAAATTCACACTAAGCCGAAAAATTTTATTTGCGATATTTGTGGATATAGTTGTCGCGAAAGGGAAACGTTGCGCGTCCATCAGCGCACCCATACAGGAGAAAGACCGTATGCTTGCAAAATCTGTAATAAACGTTTCATATCGAGCTCCTCGTTAGGTGAACATATGGCCTCTCACGCTAGTAGTCGAACGCATGTTTGTAAAGTTTGCAATGCGCGCTTTGCCCGCCAAAAGGCTCTATACCATCATAGTTTTTTACATTTAGATACAAAGAAATTCAAATGTAGAATATGCGGTAGTGCATATAAACAAGCAGCAGGATTGGCCGGTCATATGCGAAAACATCGGGAAGAAGACATGATAAAGGTGATGCCACTCGAATCAGAAATACCTTTATCGTCCGGTAATAATAACCTATTTGAGGGATTTCTTAGTTAA
Protein Sequence: MLKTLPIIKFNDVSKEKCGEIFCHRPKEFTIYCTLCDMKSFDFTDFLIHIENVHFNTDLLKLENPSMGYADLFGMNVKKENVFAEHEASMEEICCDNRSDILNGSSRVESGNEDSEEVLTVLKRTKGRSRVTSSKRKHNKAKANCNHPDADKNSKSANTTKGLKCHQCIHCSKTFVNCGLLKIHVARVHKNLAKDKESDASIKVINKEKPVDDQVFGHQKLLDESVIAENTNEKYNKDVENINSEERDDNQASDADYEPDLDNTVDNKKSFQCEDCDKTLSSCASLRVHIARYHETKSKKPKDSDNGMPCIECEEVFTNQKLYDRHCVEVHDGFKCSLCEKRFKIRYSCKRHELLHNKIKEFICSFEGCNKSFTEHYYLKRHQDVHQTERNFICNFENCGKAFHAKRRLWQHQKIHTKPKNFICDMCGYSCRERVTLRVHQRIHTVSKAMLKTLPTIKFNEAPKAKCGEIFCHSSRDFTIYCTLCDMKSFDFSDFIMHIENVHFDGDLLRLEASKIDYSQFLELNVKDENSCPEQEVSVDEMSWEDMPDILNRSSSTESSKEDVEEVLTVLKRNRGKTKESNNKKARHSQGSLGRGSKETNAAEMLKCHQCEHCNKIFVNPGLLKIHKARIHKTFVNEKKNDRESEDILAEDRADGRMPENVETLGELTVTKDTFKKYNKYANIVISEGDESQDSDENYEPESENKTNNKKSYQCENCGRNLSSVGSLKSHIARLHKTSNKKPKELDIETPCAECNEIFENQKLYDRHCIDVHDGFKCSMCDKRFKLRHQCKRHELIHKEAKQFVCSFEGCNKGFTEQYYLKRHQDIHQTERNFKCDFENCGKAFHTKRRLWAHQKIHTKPKNFICDICGYSCRERETLRVHQRTHTGERPYACKICNKRFISSSSLGEHMASHASSRTHVCKVCNARFARQKALYHHSFLHLDTKKFKCRICGSAYKQAAGLAGHMRKHREEDMIKVMPLESEIPLSSGNNNLFEGFLS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00746876;
90% Identity: iTF_00746876;
80% Identity: -