Gmor000354.1
Basic Information
- Insect
- Glossina morsitans
- Gene Symbol
- hang
- Assembly
- None
- Location
- scf7180000651846:1831253-1845703[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.042 2.3 8.3 1.3 3 23 111 132 110 132 0.93 2 18 1.3 69 3.7 3.8 3 22 238 257 236 257 0.90 3 18 0.0033 0.18 11.8 1.1 1 22 332 353 332 355 0.90 4 18 0.00085 0.046 13.7 0.2 3 23 479 500 478 500 0.96 5 18 0.00011 0.0061 16.4 0.1 1 23 508 531 508 531 0.94 6 18 4.1e-05 0.0022 17.8 0.2 2 23 625 646 624 646 0.97 7 18 0.00054 0.029 14.3 2.8 2 23 690 712 689 712 0.95 8 18 0.0053 0.29 11.2 0.1 2 23 721 743 720 743 0.95 9 18 0.002 0.11 12.5 0.1 1 23 756 779 756 779 0.95 10 18 8.9e-05 0.0049 16.8 1.1 1 23 841 863 841 863 0.99 11 18 0.0014 0.075 13.0 0.9 1 23 871 894 871 894 0.96 12 18 0.03 1.6 8.8 1.0 2 19 902 919 901 920 0.94 13 18 2.6e-05 0.0014 18.4 0.2 3 23 999 1019 998 1019 0.98 14 18 0.00031 0.017 15.0 0.4 1 23 1054 1076 1054 1076 0.97 15 18 0.00015 0.0084 16.0 0.6 2 23 1147 1169 1146 1169 0.92 16 18 2.2 1.2e+02 2.9 0.2 3 19 1190 1206 1189 1208 0.92 17 18 0.02 1.1 9.4 1.2 3 23 1224 1244 1224 1244 0.98 18 18 0.00015 0.0083 16.0 0.4 1 23 1489 1511 1489 1511 0.98
Sequence Information
- Coding Sequence
- ATGGCCTCTGTATCGGGCTTGGCACCCTCAATATTGGAGGGCATAACATCATTaaaaaaaCGAAAATCTTTAACAGTCTATCCCGTACCGGCAGTTCAAATCAAAGATGAACCAATTGATGCGGATGATGATTATAACAGTACAAAACAACATGATGAATCCGATGAAATAGTAGATCCGACAATGTTTTTAGAGCGTACCGCCGATGAAGGCGACGAACCCTTAATGGATTCTTCACACTATGGCGACTACGAAGCCCAACGCTTGTTAACTGAGTTAAAACCTTTACCAACTACTAACTTAATTAAAATGGATACAAAAGAAGCTTCGTGTAGGGCATGTAATTTGAAATTTTCGACTCGGGCCAATGCTCGACGACATGAGCGCAATTTACATCCGACTCTATTTGATAGCCTATCTACAGGTAATAGCAATAGTTCTTTAAATAAACAAACGGCTGCTTTAAATGCTTCGTTGGAATTGCAACGTGCCGTAGCAGCGGCTGTTGCGGCTGATGCTTGCAAATTGAATACCAGCGGCTTAATATCGAATCAGAAATACCGCCAAGAAGTGGTAAATGCCTTTAACAACAGCGAAATGGGGGGATGGGATTATGATTGCCCGGAAAAGTACCAACAGCTATTGACCGATGAAAAAATTGTCTTTCTTCAGCAGAATGAAGAATTTTTATTACAATATCAAACGATGACTTGCCGTTGTTGCAATAAATACTACAGCACTTATAAAAAATTTATGGCACATATGCGTAAAAAGTATCTAACTTTACCACGTAATCTTTGTTTCAATTGCTTGAAACTGAACGATTCGAAAGCTTTATTCATCTCACACTTAAAACGACGCAACTGCATAAATCTTTATAAAATATTGCAAAACTTAATGGCGAAAAATGCTAATTTTGCAGCTGCCGTGACGGCTACTGTGGCCGCCACGCCCGAAAAGATGAGAGCCAAAGAATTATTGGTTAACAAGATGTACGAGTGCAAATTGTGCCCTAAAACGTTCCGTTTGAAATTGGAATTTCGTTCCCATGTTTATGATGAACATGCGGCTGCTCAACGTAAAGACATTGGCACAACGCAGTGCAGTTTTTGCGCGGTCGATATCGAAGATCCAGCCGAACGCAAACGTCATTATAATAACATGGAATGCATAGTAATATTGCGTTGCGTCACCTGCGATACGAAACATGAAAACCAACACAAATTTATGGAACATGTCCAAGAAAAGCACTTGGCCGCCTTCCGCGATCAACCACAATTTATGACAAATGCTGATAATTCACCGGGGAAAAAGTCAAGCATGGGTGCATCTTCAGCAGATGACTCACGCAGCAGTAGTTTCAAGAATCTGTCAACTACCGTAACTCCTGCACCGCCGGCCAAAAGTCAGTGTTTTTCGCGTATGCCCCAAGCTTGTCCTATTTGTGGTCAACAGTACAACAATTACAACAATGTATTACGTCATATGGAGTCCAAACATCCTGATCAATTGCCTCAAACTTACAAATGTGTAAAATGTGGAGTGGGCTATCCTCGTCTATCTAATTTACGCGATCATATGGTTAACGTTCACGATGCTGATAAGACGCGTCATACCGGTTTTGAGTATATAGTTAATGCGGAGACCGTAAAACCTACTGGTCATACCAATAACCAGAACGTTTATAGTGGTCGTTACGATTATGTGATGAAGGATTTGATGTCTATAACAAATGGTGGGACAACTGTTGATGACGACGAAGGTGGTCGAGAGAATGCTGCTAAAAAGTTGCGTTTAGATAATAATGCAACAACGCAACTCTCAAATAATAATAATAGTGTCAGTATTACTCCCGTTTTGAATGGACAGAAGGAGTGCCCAATCTGTAAGGCCGTTTTTAACAACAATATCGGTCTCTCGAATCATATGCGCTCACATCAACTGCAAAATCCCATGGCCGCTAAGGCTGCCATGGCGGGAAGTTCATCATTTTCTACTCCACCAGTACAACAGACCATTTTGAAGAGAACACTTGAGCAAGCAGCCGATCGTCGTTTCCGTCGTATGCGTTGTCGCATCTGTCAACGACGCTTTTCCACTAAGAAATCTTACCGGTATCACATGCTTAATGATCATCAAATACGAAATGTCCAATTTATTAAGTGTCAGCTGTGTGATGCTGAATTTGCCTACGAGAAGGGTCTTAAGGTTCATATGTTTAAAGTACACAACACATTGCTCAAGGACGAAATGATTATCAAGCAGTATGAATGCGAGATATGCTCAATTGTGTATCGCACCGACGTAGAGTTACAACATCATCTGGCCAATGTACATGGCAAGCAAGGAGAAGCTCAAGACAACGATGATGACGATTATGGCGAAGATTCGTTGATGGGTGCTGCCGACAATAGTTCAGCTGGAGCGGATGCGTCTGGTATATCGACACCCATTAGTAGCATTGGTAACACATCGGGAGCTGGCGGTAATAGTGCTAGTGGTAACGTGCCTTTATATTGGTATCAATGCAAATATTGCCCCTCAAACTTCAACACCAATAAAAAGTTGGCAATTCATATTAATTCACACGATGAATTTGATTCTAATGATTATTCGTGCAAGGACTGTGGCAATGTGTATAGTGGTCGTAAGAGTTTATGGGTCCACCGTTACAAGAAGCATCCTCAAATCGCGGAGCCTTCCGAATGCCACTTGTGTAAGAAAGTATTTTTCGATACTCAAATGTTGGAAAATCATACGCCGACTTGTAATCGAAGATCGGCTAAATCTGGTGGCACGGCCAATTCTGAGTCGACTCAACCGATTTATAAACATAAAACCGGGGACGACGATGACGACGAAGACGAAGCCTCTCGCGATGATGATGATGCTGAGAAAAATGCTAATACTACCTCTGTTGCTGCCAATACCACAAGTACGACCAGCGCTAGTCTTCAAGGGTCTGGTCTAAAAATTAAGTTACCGGAAGTGGCTTGTACAATTTGCGGGGCACGCTTCACCGATCAAGATTTATTCAGTAAACATATTCAAATGCATGAAATGGAATTGTATACAGATAATCCACTGGCGTCAATGTTTGACACGGGGCCTGCCGACCCGAATCAATTTTATATGGATCGAATGAATGAGAATGGCGAGTATGCTTGCGATTTGTGTTCGAAGATATTTACGCAAATGACTGCACTTAAAGTGCATCGGAAATGGCATTTCAGAGGTGATAGCAAACAGAACGAAGCAGATCAGCGTACATCGAATCTGGGTACATTCAGCAGTACCAACCAGCAACAGCAGCACCAGGACCAATCGCACCATTCAATCCCGATCAACCATCAACGTCTACTGGGATTACAAGCGGTGGGTCTTATGCCCCGACAATCCGTCCCCCTTTCAAAATCCCAGAAACGTAAACGTGAACTCAAATGCGAATACTGTCCTTCCACTTTTATCAGCAATAATAATTTACGTCGTCATTTATATGAATTACACAAGAATGAGATCGGTAATCTACCTGTGCCGCCAAAAATTGAATTGGATGTACCTAACAATTGTCGTCGATGTAATTTAAAATTTGAAAGTAAAGCGGATTGGATTGAACATAAAGTGGCAGATGCGCGTGTAATGAAGCCTTTCGGACCGTTTCAATGGGGCTGTGATTTGTGTGGCACCTACGTGTCACGCAAAGAGAAACTAATTAACCATATACATAATCATATGAAAGAAGCATTTATTATACCGATCGAACAATCACAATCGGCACAGAAAGGCTCGATCCAACAGACGCAATCGCCAAAGCAATTAGAACAGCAGAAAACTTCCAAAAGTGATCAGACGGAAGAATTGCTTAAAGTTAAAATAAAACAAGAGCCACTAGATAATACTGAAGTACCTGTTGTCACCGAACAGCAAACCAATAATCTTGAAGAATCTTGCGACAGTGCTAAAGACCATTACGATGACGTTGACGAGGTGGAAGATGAGGTCGATGAAGATGAAGTCGAAAGGAGAGTGGCTGTCGATGAATATGATGAGGACTCTGTCGCTGACGAAGAGGAACTCGATGAAATGGCTGTAGGAGCTCAGCAGACTGTAggtgatgaggacgaagatttagatgaagatggcgatggcgatggtgacggtgacggtgatggtgacggtgatggtgatggcgatggcgatggcgatggcgatggcgatggtgatggtgatgacgctgaagacgaagatgaagatgatATTGAAGAGGATCCCGATACAAATGAAGACACAAATGAAATTGCAAGTCGGGGAAGTCAACACCTCAACAATCGAAGCAATTTAGCGATCATAGAAGCGGAGGACGAAGAAGTCGATTCTGACGAATTTGATGATGATGAAGACGAAGATTCGTTGCAAGAAAATCGTAAAAGAGCACCCATAGATAACGTAATGGTTAAATCCCGTTATCCTTGCGATCTTTGTCAAGTATTTTTCGATTCACAACAAGACCTGCAGAAGCATGTGAAAATGCATTTCCTCAACGGTCCTGGTTCAGTTACTTTAACCGAAATCAAAGCGAAATCCTCATCCTCTAGCAAAAGTCGCAGCAGTAGCAGCGATGTGGTTACTTTATCAACGACATAA
- Protein Sequence
- MASVSGLAPSILEGITSLKKRKSLTVYPVPAVQIKDEPIDADDDYNSTKQHDESDEIVDPTMFLERTADEGDEPLMDSSHYGDYEAQRLLTELKPLPTTNLIKMDTKEASCRACNLKFSTRANARRHERNLHPTLFDSLSTGNSNSSLNKQTAALNASLELQRAVAAAVAADACKLNTSGLISNQKYRQEVVNAFNNSEMGGWDYDCPEKYQQLLTDEKIVFLQQNEEFLLQYQTMTCRCCNKYYSTYKKFMAHMRKKYLTLPRNLCFNCLKLNDSKALFISHLKRRNCINLYKILQNLMAKNANFAAAVTATVAATPEKMRAKELLVNKMYECKLCPKTFRLKLEFRSHVYDEHAAAQRKDIGTTQCSFCAVDIEDPAERKRHYNNMECIVILRCVTCDTKHENQHKFMEHVQEKHLAAFRDQPQFMTNADNSPGKKSSMGASSADDSRSSSFKNLSTTVTPAPPAKSQCFSRMPQACPICGQQYNNYNNVLRHMESKHPDQLPQTYKCVKCGVGYPRLSNLRDHMVNVHDADKTRHTGFEYIVNAETVKPTGHTNNQNVYSGRYDYVMKDLMSITNGGTTVDDDEGGRENAAKKLRLDNNATTQLSNNNNSVSITPVLNGQKECPICKAVFNNNIGLSNHMRSHQLQNPMAAKAAMAGSSSFSTPPVQQTILKRTLEQAADRRFRRMRCRICQRRFSTKKSYRYHMLNDHQIRNVQFIKCQLCDAEFAYEKGLKVHMFKVHNTLLKDEMIIKQYECEICSIVYRTDVELQHHLANVHGKQGEAQDNDDDDYGEDSLMGAADNSSAGADASGISTPISSIGNTSGAGGNSASGNVPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQIAEPSECHLCKKVFFDTQMLENHTPTCNRRSAKSGGTANSESTQPIYKHKTGDDDDDEDEASRDDDDAEKNANTTSVAANTTSTTSASLQGSGLKIKLPEVACTICGARFTDQDLFSKHIQMHEMELYTDNPLASMFDTGPADPNQFYMDRMNENGEYACDLCSKIFTQMTALKVHRKWHFRGDSKQNEADQRTSNLGTFSSTNQQQQHQDQSHHSIPINHQRLLGLQAVGLMPRQSVPLSKSQKRKRELKCEYCPSTFISNNNLRRHLYELHKNEIGNLPVPPKIELDVPNNCRRCNLKFESKADWIEHKVADARVMKPFGPFQWGCDLCGTYVSRKEKLINHIHNHMKEAFIIPIEQSQSAQKGSIQQTQSPKQLEQQKTSKSDQTEELLKVKIKQEPLDNTEVPVVTEQQTNNLEESCDSAKDHYDDVDEVEDEVDEDEVERRVAVDEYDEDSVADEEELDEMAVGAQQTVGDEDEDLDEDGDGDGDGDGDGDGDGDGDGDGDGDGDGDGDDAEDEDEDDIEEDPDTNEDTNEIASRGSQHLNNRSNLAIIEAEDEEVDSDEFDDDEDEDSLQENRKRAPIDNVMVKSRYPCDLCQVFFDSQQDLQKHVKMHFLNGPGSVTLTEIKAKSSSSSKSRSSSSDVVTLSTT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00750642;
- 90% Identity
- iTF_00747638;
- 80% Identity
- -