Basic Information

Insect: Glossina brevipalpis
Gene Symbol: hang
Assembly: GCA_000671755.1
Location: Scaffold106:330510-347059[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.049 3 8.2 1.3 3 23 257 278 256 278 0.93

2 18 1.5 90 3.5 3.8 3 22 384 403 382 403 0.90

3 18 0.004 0.24 11.6 1.1 1 22 478 499 478 501 0.90

4 18 0.00099 0.061 13.5 0.2 3 23 625 646 624 646 0.96

5 18 0.00013 0.008 16.3 0.1 1 23 654 677 654 677 0.94

6 18 4.8e-05 0.0029 17.7 0.2 2 23 771 792 770 792 0.97

7 18 0.00063 0.038 14.1 2.8 2 23 836 858 835 858 0.95

8 18 0.0062 0.38 11.0 0.1 2 23 867 889 866 889 0.95

9 18 0.0023 0.14 12.4 0.1 1 23 902 925 902 925 0.95

10 18 0.0001 0.0063 16.6 1.1 1 23 987 1009 987 1009 0.99

11 18 0.0016 0.098 12.9 0.9 1 23 1017 1040 1017 1040 0.96

12 18 0.035 2.1 8.7 1.0 2 19 1048 1065 1047 1066 0.94

13 18 3e-05 0.0018 18.3 0.2 3 23 1145 1165 1144 1165 0.98

14 18 0.00036 0.022 14.9 0.4 1 23 1200 1222 1200 1222 0.97

15 18 0.00018 0.011 15.9 0.6 2 23 1293 1315 1292 1315 0.92

16 18 0.75 46 4.5 0.3 3 19 1336 1352 1335 1354 0.93

17 18 0.023 1.4 9.2 1.2 3 23 1370 1390 1370 1390 0.98

18 18 0.00018 0.011 15.9 0.4 1 23 1653 1675 1653 1675 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.049	3	8.2	1.3	3	23	257	278	256	278	0.93
2	18	1.5	90	3.5	3.8	3	22	384	403	382	403	0.90
3	18	0.004	0.24	11.6	1.1	1	22	478	499	478	501	0.90
4	18	0.00099	0.061	13.5	0.2	3	23	625	646	624	646	0.96
5	18	0.00013	0.008	16.3	0.1	1	23	654	677	654	677	0.94
6	18	4.8e-05	0.0029	17.7	0.2	2	23	771	792	770	792	0.97
7	18	0.00063	0.038	14.1	2.8	2	23	836	858	835	858	0.95
8	18	0.0062	0.38	11.0	0.1	2	23	867	889	866	889	0.95
9	18	0.0023	0.14	12.4	0.1	1	23	902	925	902	925	0.95
10	18	0.0001	0.0063	16.6	1.1	1	23	987	1009	987	1009	0.99
11	18	0.0016	0.098	12.9	0.9	1	23	1017	1040	1017	1040	0.96
12	18	0.035	2.1	8.7	1.0	2	19	1048	1065	1047	1066	0.94
13	18	3e-05	0.0018	18.3	0.2	3	23	1145	1165	1144	1165	0.98
14	18	0.00036	0.022	14.9	0.4	1	23	1200	1222	1200	1222	0.97
15	18	0.00018	0.011	15.9	0.6	2	23	1293	1315	1292	1315	0.92
16	18	0.75	46	4.5	0.3	3	19	1336	1352	1335	1354	0.93
17	18	0.023	1.4	9.2	1.2	3	23	1370	1390	1370	1390	0.98
18	18	0.00018	0.011	15.9	0.4	1	23	1653	1675	1653	1675	0.98

Sequence Information

Coding Sequence: ATGGCCTCTGTATCGGGCTTGGCACCCTCAATATTGGAGGGCATAACATCGTTaaaaaaaCGCAAATCTTTAACAGTCTATGTGAGTCCCAAACAAACGCAAAGTCCAGCACCAGCACctacaacgataactactactagtactaccactactactaccactacttctattattactactactactacttctactaAACGTCCCTATAAATATAAACCACGACAAAGTAGTCAACAGCAAACGCAATCCTCTAATGTGCTGCTGCACTCTAGTAAAGTCAAGCACAAAAGTAGTCATAAAGAACTACTTATTCCGATACAACAAACAACGCCTATGCAAATATTTACATCTCCCGTAGTTGCGGCAGCACCTACTGCTACCATAACTTCTGCTGCTCTGGCTTTAGTGCCTGGTAACGAGGCTACAGCACCAACAAATGTTGCTACGGTTGTAGCTTCTGCTACGAGTTGTCAAAATGCTGTTCAGCAATTGCGTTTATTCAGACGATACTCCTATAATCCTGTACCAGCGGTTCAGATCAAAGATGAACCAATTGACGCGGATGATGATTACAACAGTACAAAACAACATGATGAATCCGATGAAATAGTGGATCCAACGATGTTTTTAGAGCGTACCGCCGATGAAGGCGATGAGCCCTTAATGGATTCTTCGCACTATGGTGACTACGAGGCACAACGTTTGTTAACAGAGTTGAAGCCTCTACCGACAACAAACTTAATTAAAATGGACACAAAAGAAGCTTCGTGTAGGGCCTGTAATCTGAAATTTTCCACTCGGGCCAATGCTCGACGACATGAGCGTAATTTACATCCGACTCTATTTGATAGCCTATCGACAGGTAATAATAACAGTTCTTTAAATAAGCAAACGGCTGCTTTAAATGCGTCATTGGAATTGCAACGGGCCGTAGCAGCGGCTGTGGCGGCGGATGCTTGCAAATTAAACACCAGTGGCTTAATATCGAATCAGAAATATCGCCAAGAAGTAGTGAATGCCTTTAATAATAGCGAAATGGGGGGTTGGGATTATGATAGTCCGGAGAAGTACCAACACCTGTTGACCGATGAAAAGATTGTCTTTCTTCAGCAAAATGAAGAATTTCTACTACAATATCAAACGATGACTTGTCGTTGTTGCAATAAATACTACAGCACTTATAAAAAATTTATGGCTCATATGCGTAAAAAATATCTAACTTTGCCACGTAACCTTTGTTTCAATTGCCTGAAATTGAACGATTCGAAAGCTTTATTTATTTCACATTTGAAGCGACGAAACTGCATTAATCTTTATAAAATATTGCAAAATCTAATGGCTAAGAATGCTAATTTTGCAGCTGCTGTGACTGCTACTGTGGCGGCCACGCCAGAAAAGATGAGAGCCAAAGAGTTATTGGTTAACAAAATGTACGAATGCAAATTGTGCCCCAAAACGTTCCGTTTGAAATTAGAGTTTCGTTCGCATGTTTACGATGATCATGCGGCTGTGCAACGCAAAGATATTGCCACAACGCAATGTAGTTTTTGTGCGGTGGATATTGAAGATCCAGCTGAGCGTAAACGTCACTACAATAACATGGAATGCATAGTAACATTGCGTTGCGTTACCTGCGACAGCAAACATGAGAATCAGCAGAAATTTATGGAACATGTTCAAGAGAAGCATTTGGCCGCTTTCCGTGATCAACCACAATTTATGTCAAATGCTGATAATTCACCGGGAAAAAAGTCAAGCATGGGTGCATCTTCAGCTGATGACTCGCGTAGCAGTAGCTTCAAGAATCTTGCAGCTACCGCAAATCCTACACCGCCGGCTAAAAGTCAATGTTTTTCTCGTATGCCACAAGCTTGCCCCATTTGTGGTCAACAGTACAATAATTACAATAATGTATTGCGTCATATGGAATCCAAACATCCTGATCAATTGCCTCAAACCTATAAATGCGTAAAGTGCGGAGTGGGCTATCCCCGCCTATCTAATTTGCGCGATCATATGGTTAACGTCCATGATGCTGATAAGACACGTCACACCGGTTTTGAGTATATAGTTAATGCGGAGACAGTAAAACCCAGTAGTCATGCCAATAATCAGAACGTTTACAGCGGACGTTACGATTATGTGATGAAGGACTTGATGTCTATAACAAATGGTGGGACAGCTGTTGATGACGATGAAAGTGGTCGAGAGAATGCTGCTAAGAAATTGCGTTTAGATAATAACGCAGCAACACAACTTTCAAATAATAATAATACCGTTAGTATTACTCCCGTTTTGAACGGACAGAAAGAGTGTCCAATCTGCAAGGCCGTTTTTAATAATAATATTGGTCTCTCGAACCATATGCGCTCACACCAACTGCAAAATCCCATGGCTGCTAAGGCTGCCATGGCTGGAAGTTCATCATTTTCTACTCCACCGGTACAACAGACCATTTTGAAGAGAACACTTGAGCAGGCAGCTGATCGTCGTTTCCGCCGTATGCGTTGTCGCATCTGTCAACGACGCTTTTCCACTAAAAAGTCTTATAGATATCACATGCTTAATGATCACCAAATACGAAATGTCCAGTTTATTAAGTGTCAGCTGTGTGACGCTGAATTTGCATACGAAAAGGGTCTTAAGGTTCACATGTTCAAAGTACATAACACCTTGCTTAAGGATGAAATGATTATCAAGCAATATGAATGCGAGATATGCTCGATTGTGTATCGCACCGACGTAGAATTACAACATCATTTGGCCAACGTACATGGCAAACAAGGAGAAGCTCAAGACAACGATGATGATGATTATGGCGAAGACTCCTTGATAGGTACTGCCGACAATAGTTCAGCTGGAGCGGATGCGTCTGGCATTTCGACACCCATTGGTGGCATTGGTAATACATCGGGAGCTGGCGGTAATAGTGCAAGTGGTAGTGTGCCTTTATATTGGTATCAATGCAAATATTGTCCCTCAAACTTCAACACTAACAAAAAGTTGGCAATTCATATAAATTCACACGACGAATTTGATTCTAATGATTATTCTTGCAAAGATTGCGGCAATGTTTATAGTGGTCGTAAGAGTTTATGGGTACATCGTTACAAGAAACATCCTCAAATCGCAGAGCCTTCCGAATGCCATTTATGTAAGAAGGTGTTCTTCGACACTCAAATGTTAGAAAATCACACACCGACTTGTAATCGAAGGTCAGCTAAATCTGGCAGTACAGCCAATTCCGATTTAACTCAACCGATTTACAAACATAAAACCGGCGATGATGACGACGATGAAGATGAAGCCTCTCGCGATGATGATGATGGTGAGAAAATCTCTGGTACTACCTCTATTGCTGCCAATACCACGACTACGTCAAGCACTACTCTTCAAGGGTCTGGTATAAAAATTAAGCTACCGGAAGTGGCATGCACAATTTGCGGAGCACGTTTCACCGATCAAGATTTATTCAGTAAACATATACAAATGCACGAAATGGAATTGTATACAGATAATCCGCTGGCGTCAATGTTTGACACAGGGCCGGCTGATCCTAATCAATTTTATATGGATCGAATGAATGAGAATGGCGAGTATGCTTGCGATTTGTGTTCGAAGATATTTACGCAAATGACTGCACTTAAAGTGCATCGGAAATGGCATTTCAGAGGTGATAGCAAACAGAACGAAGTCGATCAGCGTACATCGAATCTGGGTACATTCAGCAGTACCAATCAGCAGCAGCAGCACCAGGACCAATCGCACCATTCAATCCCGATCAACCATCAACGTCTACTGGGATTACAAGCGGTGGGTCTTATGCCCCGACAATCCGTCCCCCTTTCAAAATCCCAGAAACGTAAACGCGAACTTAAATGTGAATACTGTCCCTCCACTTTTATCAGCAACAATAACTTACGTCGCCACTTATATGAATTACATAAGAATGAGATCGGTAACCTACCGGTGCCGCCCAAAATTGAGTTGGATGTACCCAACAACTGTCGTCGATGTAATTTAAAATTTGAAAGTAAATCGGATTGGATTGAACATAAAGTGGCCGATGCACGTGTAATGAAGCCTTTCGGACCATTTCAGTGGGGCTGTGATTTGTGTGGCACATACGTGTCGCGCAAAGAGAAACTAATTAACCATATACATAATCATATGAAAGAAGCATTTATTGTACCGATAGAACAATCGCAATCGGCGCAGAAAGGCTCGATGCAACAGAGACAATCACCAAAGCAGTTAGAACAACAGAAAAGTTCCAAAAGTGATCAGACGGAAGAATTGCTTAAAATTAAAATTAAACAAGAGCCACTAGATAATACTGAAGTACCTGTTGTCACGGAACAGCAAACCAACAATCTTGAAGAATCTTACGACAGCGCTAAAGATCATTATGATGACGTTGACGAGGTGGAAGACGAGGTCGATGAAGATGAAGTTGAAAGAAGAGTAGCTGCGGATGAATACGATGAGGACTCTGCTGCTGACGAAGAAGAACTTGATGAAATGGCTGTAGGAGCTCAGCAAACTGTAggcgatgaggatgaagagttagatgaagatggtgatggtgatggtgatggtgatggtgacggtgatggtgatgttgatggcgatggtgatgccgatggcgacggcgacggcgatggtgatggtgatggtgatggtgatggcgatggcgacggcgatggcgacggcgatggcgatgacgtggaagatgaagacgaagacgatATTGAAGAGGATCCCGACACGAATGAAGACACAAATGAAATTGCTAGCAGGCCAGTTCGTCACCTTAACAACCGGAGCAATCTAGCCATTATAGAAGCTGAGGATGAAGAAGTTGATTCTGACGAATTTGATGATGATGAAGACGAAGATTCATTGCAAGAAAATCGTAAAAGAGCCTCAGTCGATAATGCGGTCATAAAATCCCGTTATCCTTGTGATCTTTGTCAAGTATTTTTCGATTCACAGCAAGACCTGCAAAAGCATGTTAAAATGCATTTCCTCAACGGTCCTGGTTCAGTTACTTTAACCGAAATCAAAGCGAAATCCTCATCCTCTAGCAAAAGTCGCAGTAGTAGTAGCGATGTGGTCACTTTATCAACGACATAA
Protein Sequence: MASVSGLAPSILEGITSLKKRKSLTVYVSPKQTQSPAPAPTTITTTSTTTTTTTTSIITTTTTSTKRPYKYKPRQSSQQQTQSSNVLLHSSKVKHKSSHKELLIPIQQTTPMQIFTSPVVAAAPTATITSAALALVPGNEATAPTNVATVVASATSCQNAVQQLRLFRRYSYNPVPAVQIKDEPIDADDDYNSTKQHDESDEIVDPTMFLERTADEGDEPLMDSSHYGDYEAQRLLTELKPLPTTNLIKMDTKEASCRACNLKFSTRANARRHERNLHPTLFDSLSTGNNNSSLNKQTAALNASLELQRAVAAAVAADACKLNTSGLISNQKYRQEVVNAFNNSEMGGWDYDSPEKYQHLLTDEKIVFLQQNEEFLLQYQTMTCRCCNKYYSTYKKFMAHMRKKYLTLPRNLCFNCLKLNDSKALFISHLKRRNCINLYKILQNLMAKNANFAAAVTATVAATPEKMRAKELLVNKMYECKLCPKTFRLKLEFRSHVYDDHAAVQRKDIATTQCSFCAVDIEDPAERKRHYNNMECIVTLRCVTCDSKHENQQKFMEHVQEKHLAAFRDQPQFMSNADNSPGKKSSMGASSADDSRSSSFKNLAATANPTPPAKSQCFSRMPQACPICGQQYNNYNNVLRHMESKHPDQLPQTYKCVKCGVGYPRLSNLRDHMVNVHDADKTRHTGFEYIVNAETVKPSSHANNQNVYSGRYDYVMKDLMSITNGGTAVDDDESGRENAAKKLRLDNNAATQLSNNNNTVSITPVLNGQKECPICKAVFNNNIGLSNHMRSHQLQNPMAAKAAMAGSSSFSTPPVQQTILKRTLEQAADRRFRRMRCRICQRRFSTKKSYRYHMLNDHQIRNVQFIKCQLCDAEFAYEKGLKVHMFKVHNTLLKDEMIIKQYECEICSIVYRTDVELQHHLANVHGKQGEAQDNDDDDYGEDSLIGTADNSSAGADASGISTPIGGIGNTSGAGGNSASGSVPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQIAEPSECHLCKKVFFDTQMLENHTPTCNRRSAKSGSTANSDLTQPIYKHKTGDDDDDEDEASRDDDDGEKISGTTSIAANTTTTSSTTLQGSGIKIKLPEVACTICGARFTDQDLFSKHIQMHEMELYTDNPLASMFDTGPADPNQFYMDRMNENGEYACDLCSKIFTQMTALKVHRKWHFRGDSKQNEVDQRTSNLGTFSSTNQQQQHQDQSHHSIPINHQRLLGLQAVGLMPRQSVPLSKSQKRKRELKCEYCPSTFISNNNLRRHLYELHKNEIGNLPVPPKIELDVPNNCRRCNLKFESKSDWIEHKVADARVMKPFGPFQWGCDLCGTYVSRKEKLINHIHNHMKEAFIVPIEQSQSAQKGSMQQRQSPKQLEQQKSSKSDQTEELLKIKIKQEPLDNTEVPVVTEQQTNNLEESYDSAKDHYDDVDEVEDEVDEDEVERRVAADEYDEDSAADEEELDEMAVGAQQTVGDEDEELDEDGDGDGDGDGDGDGDVDGDGDADGDGDGDGDGDGDGDGDGDGDGDGDGDDVEDEDEDDIEEDPDTNEDTNEIASRPVRHLNNRSNLAIIEAEDEEVDSDEFDDDEDEDSLQENRKRASVDNAVIKSRYPCDLCQVFFDSQQDLQKHVKMHFLNGPGSVTLTEIKAKSSSSSKSRSSSSDVVTLSTT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00750642;
90% Identity: iTF_00749868; iTF_00749125; iTF_00748397; iTF_00750642; iTF_00746880;
80% Identity: -