Basic Information

Insect: Glossina morsitans
Gene Symbol: -
Assembly: None
Location: scf7180000652160:3594872-3602359[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 24 0.00015 0.0081 16.1 1.1 1 23 271 294 271 294 0.95

2 24 0.00031 0.017 15.1 3.1 1 23 300 323 300 323 0.97

3 24 9.3e-05 0.0051 16.7 0.2 2 23 364 385 363 385 0.96

4 24 0.00072 0.039 13.9 2.4 1 23 463 486 463 486 0.97

5 24 8e-05 0.0044 16.9 1.9 2 23 563 584 562 584 0.97

6 24 0.0011 0.059 13.3 1.6 1 20 595 614 595 617 0.93

7 24 0.061 3.4 7.8 0.5 1 23 691 714 691 714 0.94

8 24 3.5 1.9e+02 2.3 2.1 1 20 721 740 721 742 0.79

9 24 0.22 12 6.1 0.2 2 23 754 776 753 776 0.95

10 24 0.0013 0.071 13.1 0.2 2 23 790 811 789 811 0.95

11 24 9.9e-07 5.4e-05 22.9 3.6 1 23 818 840 818 840 0.98

12 24 0.25 14 5.9 3.4 1 23 981 1005 981 1005 0.93

13 24 0.67 37 4.6 2.9 1 23 1042 1065 1042 1065 0.94

14 24 0.0047 0.26 11.3 6.1 1 23 1079 1101 1079 1101 0.97

15 24 0.0033 0.18 11.8 2.6 1 23 1110 1132 1110 1132 0.96

16 24 0.0051 0.28 11.2 1.3 2 23 1159 1181 1158 1181 0.93

17 24 0.014 0.75 9.9 2.2 1 23 1226 1249 1226 1249 0.97

18 24 0.06 3.3 7.9 1.0 1 23 1286 1309 1286 1309 0.93

19 24 0.00012 0.0066 16.3 4.8 1 23 1346 1369 1346 1369 0.98

20 24 0.0021 0.11 12.5 0.8 3 23 1403 1423 1401 1423 0.95

21 24 3.9e-06 0.00021 21.0 0.4 1 23 1429 1451 1429 1451 0.99

22 24 3.4e-07 1.8e-05 24.4 2.6 1 23 1457 1479 1457 1479 0.99

23 24 0.00011 0.006 16.5 0.7 1 23 1485 1507 1485 1507 0.99

24 24 0.00065 0.036 14.0 0.1 1 22 1513 1534 1513 1537 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	24	0.00015	0.0081	16.1	1.1	1	23	271	294	271	294	0.95
2	24	0.00031	0.017	15.1	3.1	1	23	300	323	300	323	0.97
3	24	9.3e-05	0.0051	16.7	0.2	2	23	364	385	363	385	0.96
4	24	0.00072	0.039	13.9	2.4	1	23	463	486	463	486	0.97
5	24	8e-05	0.0044	16.9	1.9	2	23	563	584	562	584	0.97
6	24	0.0011	0.059	13.3	1.6	1	20	595	614	595	617	0.93
7	24	0.061	3.4	7.8	0.5	1	23	691	714	691	714	0.94
8	24	3.5	1.9e+02	2.3	2.1	1	20	721	740	721	742	0.79
9	24	0.22	12	6.1	0.2	2	23	754	776	753	776	0.95
10	24	0.0013	0.071	13.1	0.2	2	23	790	811	789	811	0.95
11	24	9.9e-07	5.4e-05	22.9	3.6	1	23	818	840	818	840	0.98
12	24	0.25	14	5.9	3.4	1	23	981	1005	981	1005	0.93
13	24	0.67	37	4.6	2.9	1	23	1042	1065	1042	1065	0.94
14	24	0.0047	0.26	11.3	6.1	1	23	1079	1101	1079	1101	0.97
15	24	0.0033	0.18	11.8	2.6	1	23	1110	1132	1110	1132	0.96
16	24	0.0051	0.28	11.2	1.3	2	23	1159	1181	1158	1181	0.93
17	24	0.014	0.75	9.9	2.2	1	23	1226	1249	1226	1249	0.97
18	24	0.06	3.3	7.9	1.0	1	23	1286	1309	1286	1309	0.93
19	24	0.00012	0.0066	16.3	4.8	1	23	1346	1369	1346	1369	0.98
20	24	0.0021	0.11	12.5	0.8	3	23	1403	1423	1401	1423	0.95
21	24	3.9e-06	0.00021	21.0	0.4	1	23	1429	1451	1429	1451	0.99
22	24	3.4e-07	1.8e-05	24.4	2.6	1	23	1457	1479	1457	1479	0.99
23	24	0.00011	0.006	16.5	0.7	1	23	1485	1507	1485	1507	0.99
24	24	0.00065	0.036	14.0	0.1	1	22	1513	1534	1513	1537	0.89

Sequence Information

Coding Sequence: ATGAGCGATAGTACATTTTGTTTGATAAAAGGAAAACCGTATGTTTGTCGAACTTGTTTAGCGGTTTGCAGCACTGAAAATGTCTTGTTGACAGAATGCTTGGCCGGCGTAGGAAAACTCTTGAAAAATTTCCTTCAATCATTGCTCACGCAGAGCAATTATAGTGACAAAATGCCGCAATATTTGTGCAATAATTGCAATGAAAAACTGAAGAATACTGATGAATTTATACAACAAATGATAGAAACCCATGAGTTTTACGAGATTCAGCTTGAAGAAAAAGTTCTTGCTGGATGTACTAACGATTCATTCCTATGGGAAGACTCCCTGCCCTATAGCGAGAAAAACTTAAAAAATTGTAATTCTAACGATAAGGGCGGTACGGTGGATTGCTTAGTGGAAACTGTCATCGATATACCGATTGATGGTGCTCTTAAATGTCAACAAATGGAAAATGATTACCTACAGATTAAAAAAGAGAGTATGACTGAGAATTGCCTCCATTCCGATTTGGGCTGTATCGATGATGAAGAATCTAAGGAGGGCTTCGTAAGGAGTAAACAAGGAGAAAAGATACCATCAGAAACTGTTAACAAAGATTTTCTGGCACCGACAACAAAAGAAGATGATATACCAACTGATAATTTAAATTTCTTACCCAACTTTTCATCTGGTACAGAGGACGAGGATGACGAATATATCCCACCGAAACCAAAGATACGAAAATCAATCATAGATAAAAATGTGAAAACTCGTAAAGGTCGTCCCAGATCTCAGGAGTTTTCGAAAATaaaaaaaGTCAATGACCGTTTCCTTTGTTATATGTGTGATAAAACGTTTTCTTTGCGAAAAGACGTCACACGTCACATAAACACTATACATTCCGACAAGGCCCACTTTCAATGTGAATTTTGTGGCCATCAATTTAAGCGCAAGGATAAAGTACGAGAACATATAAGAGCTTATCATCAACCCACGCATACGAAGACAAATACTCCTAAATGCATTCCAAATGGAATAAAAACTAGACTTAACCAATGGAAATACGGTGATTACTTGTACAGTAAGCCTACTGTACGCCGTTTGATTGAATGTAAATTATGTGAAACACGATTTTCAAACGCAGCTGAATTACGTCAACATCTTGAAATGCATCGAGATTCAAAAACCTTACAACATTTACAGTTGCGCAGTAATGTCGTAAGGCAACTGTACCCGAATGCCGATACCATTGAGAAAGCTAGAGAAACTATAGAGAAAGACAtttttttGAATCAATGGTCACGTTTTTATATTATACTTAATGAGCATGGCTATGAAGTTTCGATCAGTGACACTGAAAATGAAGTTGATAGGAGCGACGATGATGAAGTTTACGAAAAACGCTATCAGTGTGAATTGTGTCAACTGAAGTTTTCATATAAATACCAAGTTTTTAGTCATATGAAAGAGCAACATCGCGAAACTGAAAAGGAAATACCCTATAAATGTAAATTATGTAAACTGGATTTTCTTTGTTCACGTATGTTCGAGCAACATTCGCGTACTCATTGTCGTAATAGAGATAAATCTTTCGTTTGTATACGGTGTCCGGGAAAGTTTGCGTGGATAGAGAGTATGAGACAACACAATTGTTTGCATAAGCCGAGATTTTTAACGGGAACGAAGGATAAAAACAATCCCTTAAAATGTTCTATATGTCGTACGACTTTTAAAACAGCTTTAAAGCTAAAGACACATATGAAAATACACGCGGCCATTGAATGGAGCAATCCGCAAGAGTTCCGATGTGCTTTATGTGATAAACATTTTTCAAAATTAAAACAATTACGAGAACACTTGCCCGTGCATCAGGATGGCGAAACTGATATTGATTTTGAAAATTCTCTTTACATGAAAACATTTGTTAAGTTGGAAAATGCTTTAGATCGAGAATCTGTGAAAAAAGTCATAGCAAATGACTACAGTAAAAAGCAACTTACGCGATTTTATTGTGCTTTGGATAAAAATGCTGAAGAACTCGACTTGATGGACTCGGGTACTGAGTCGGAAGAAGAGCATCGCCATTCTTACAAGTGTTTACAATGTTTTTCGGACTTCGGACGTAGATCATCCTTGGTTGAACATCAAATAGCGAATCATGCGGGAATATCCTTACCCTTTCGTTGTGATATATGCTCGCGACAATTCGTTTGTCAAGAAGTTCTCGATCATCATCAATATCGCAATTGTTTAAACGAATATCGCCAACAAGGTCTTCGGTGCGATATTTGCGCGTTGAATTTTGTTTGGCCCAGAAATTTAGCGAAACATAAACAAATGAAGCATTCTGATCGTGGCGACCAAAACAAATATGGTAATAAATTAAAATGTGATGAGTGCGACAAAGTATTTATTTGGTTAAAGGATTTAAAACGGCATCGGGTTATACATCGACCAGATGaaaaaaaaTATGCTTGTCCCCATTGCGAAAGGAAATTTTATCGTAAAGATCATTTATTAGCACATATACGCACTCACGATCCCAATAGCGTGCCAATAACATTGAATTTAAATCGAAAAGTAAACAATTTTGATGTGAACCTAAGCAGACCTCATGGTTATAAACAGATCAAATGCATGATTTGTTATTCTCAGCACACAACTATACAGGATTTACGCAATCATTTGGCAAAACATCAGTATACGATTGATTTTGAAAGGCGCAAGGAAATGGAAGTTGTTGATTTCATTTCTGCACAATTCTATCCCGAAGAAGAGATAATGACGGAGGCGATGTTAATGGCGCGAATTGGTATTGATTTAACCAACAAACATAAACTGGAACGTTTTTATTCCATAACAAATGAAAATGGTTACGAGTTAAGTTTAGACAGTTCGGAAACTGACCTCGATTCGGAAGATGATGATGAGAGTGCCAAACTTACTACGAAAGGACGTTATAACTGCGATATATGCCCCCATTTGAGCTTTGCGCGTAAATACAAACTATTTCAACATCATGAAAATGAACACACTTGGGAGGAGGGGCGTCATGTTTGCAGTAGCTGTAATGCCCGGTTTTTGTCCCCCGAAATATTGGAGCATCACTACAAACAACAGTGCAAAAATCCCAATAAACGGCATCAGTGCCGCAAATGTTCATTGCGTTTCATGTGGAAAGATAACCTTAAATCGCACTTTGCTATGATGCACGCCCGCGAAAATGCAAATGAGCATGAAATGAGTCGCCGTTATGAGTGCTTCCTGTGTCAGCTCAAATTTGAGCATAAATGCGATCTAAAGCGTCATATGAGTTTGCACGGCGACAGTAAAGATGTGTACTTGCATTACTGTGTATTATGTCCACGTATGTTTTATTTACGGGAAAATCTTTGTGCGCATATTAAAGAACATGGCATAAAAGTCACCGACATTGATTGTATGGAAAGTATTATTGCTTCGACGTGCTGGCCTAATGGCGACAAAGTGATTGAATGCAAAATATGTCACAGGAATTATTCAACCATGGCAAACTTATCTGAACACTTTCAACAAATGCATGTATCTGCGATTTTGTCTGGTGGTTTAGAAAACTACTCGATAATCAATGAACGCGGATATGAACTACATTTGGAATGGAATTCCGAGACGGAAACAGAAGAGGAGTTAACTGGCTGTTTGGCGAAAAATTCGTATATTTGTGAAGTTTGCAATTTTCAATCTAAACGAAAGTATAAAATGGCGCAGCATCAACGCTCTTTCCATTCATATGAAACACTTACCTTAAAATGCGATTATTGCATTTTTAAAACAGTCTCGCAGAAAATACTTGACTATCATAAAGCAAGCCAATGTTTGAATAATGAAAAGCAATACACTTGTAGTCAGTGTTCATTTCGTTTCATGTGGCAAGAAAATCTAAATAAACATGTGGAATTACAGCATACTCTTAAAGTAGTTGTGGATGTTACCAAACAAGAGGAAAGCTCCAGTGCAAAATCATCTTTGCTACCTCTTCCCCTGCAGCAGAATTCCCGAAAGGAGATGAAGTTATTTAAATGCCCTGATTGCCATCGTACTTATAACCGTAAAGATCGTTATAACGCACATTTGAAAAAATATCATAACCCAGTTAACGGTCAACCTTTACCAGTGGTAAGGGGCAAGTCTTCCAAAAAGGATACCAGCAAACAAGTTGCCATCAAAGTGAAGCAAAAGCATTTGTGTGCTTTGTGTGGTTTAGCTTTGTCTTCTGCCTCCTGTCTAGCTATACATATGCGTCGACATACCGGCGAACGTCCCTATAAATGTGATATATGCGAACTAGCTTTCGCTAGGCGCACTGATTTAATTTCACATAGACGCACGCATACTGGGGAAAGACCTTACAAGTGCACGATATGCGCGAAAACCTTTATACGCTCTTATAAATTGACTACGCACATGCGCACACATACTGGTGAAAGGCCATACAAGTGCACATTCTGTGACAGTGCTTTTGCTCAATCGAATGATTTAGTTATACATCGCCGTCGTCATACCGGCGAAAGGCCTTACTTATGCGATATATGTGGAGAGGGTTTTATACAGGGCAGTGCTCTAAAAGCACATCGTAGGCAAAAGGGTCATCACGTCAATAATACAGACGTGCATACTTCAAAACATTTACCTGCATTTCCGGTGGAGTTCTAA
Protein Sequence: MSDSTFCLIKGKPYVCRTCLAVCSTENVLLTECLAGVGKLLKNFLQSLLTQSNYSDKMPQYLCNNCNEKLKNTDEFIQQMIETHEFYEIQLEEKVLAGCTNDSFLWEDSLPYSEKNLKNCNSNDKGGTVDCLVETVIDIPIDGALKCQQMENDYLQIKKESMTENCLHSDLGCIDDEESKEGFVRSKQGEKIPSETVNKDFLAPTTKEDDIPTDNLNFLPNFSSGTEDEDDEYIPPKPKIRKSIIDKNVKTRKGRPRSQEFSKIKKVNDRFLCYMCDKTFSLRKDVTRHINTIHSDKAHFQCEFCGHQFKRKDKVREHIRAYHQPTHTKTNTPKCIPNGIKTRLNQWKYGDYLYSKPTVRRLIECKLCETRFSNAAELRQHLEMHRDSKTLQHLQLRSNVVRQLYPNADTIEKARETIEKDIFLNQWSRFYIILNEHGYEVSISDTENEVDRSDDDEVYEKRYQCELCQLKFSYKYQVFSHMKEQHRETEKEIPYKCKLCKLDFLCSRMFEQHSRTHCRNRDKSFVCIRCPGKFAWIESMRQHNCLHKPRFLTGTKDKNNPLKCSICRTTFKTALKLKTHMKIHAAIEWSNPQEFRCALCDKHFSKLKQLREHLPVHQDGETDIDFENSLYMKTFVKLENALDRESVKKVIANDYSKKQLTRFYCALDKNAEELDLMDSGTESEEEHRHSYKCLQCFSDFGRRSSLVEHQIANHAGISLPFRCDICSRQFVCQEVLDHHQYRNCLNEYRQQGLRCDICALNFVWPRNLAKHKQMKHSDRGDQNKYGNKLKCDECDKVFIWLKDLKRHRVIHRPDEKKYACPHCERKFYRKDHLLAHIRTHDPNSVPITLNLNRKVNNFDVNLSRPHGYKQIKCMICYSQHTTIQDLRNHLAKHQYTIDFERRKEMEVVDFISAQFYPEEEIMTEAMLMARIGIDLTNKHKLERFYSITNENGYELSLDSSETDLDSEDDDESAKLTTKGRYNCDICPHLSFARKYKLFQHHENEHTWEEGRHVCSSCNARFLSPEILEHHYKQQCKNPNKRHQCRKCSLRFMWKDNLKSHFAMMHARENANEHEMSRRYECFLCQLKFEHKCDLKRHMSLHGDSKDVYLHYCVLCPRMFYLRENLCAHIKEHGIKVTDIDCMESIIASTCWPNGDKVIECKICHRNYSTMANLSEHFQQMHVSAILSGGLENYSIINERGYELHLEWNSETETEEELTGCLAKNSYICEVCNFQSKRKYKMAQHQRSFHSYETLTLKCDYCIFKTVSQKILDYHKASQCLNNEKQYTCSQCSFRFMWQENLNKHVELQHTLKVVVDVTKQEESSSAKSSLLPLPLQQNSRKEMKLFKCPDCHRTYNRKDRYNAHLKKYHNPVNGQPLPVVRGKSSKKDTSKQVAIKVKQKHLCALCGLALSSASCLAIHMRRHTGERPYKCDICELAFARRTDLISHRRTHTGERPYKCTICAKTFIRSYKLTTHMRTHTGERPYKCTFCDSAFAQSNDLVIHRRRHTGERPYLCDICGEGFIQGSALKAHRRQKGHHVNNTDVHTSKHLPAFPVEF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00747635;
90% Identity: iTF_00748394;
80% Identity: -