Gfus002522.1
Basic Information
- Insect
- Glossina fuscipes
- Gene Symbol
- -
- Assembly
- None
- Location
- Scaffold119:39544-40634[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.5e-20 1.8e-16 59.7 0.0 2 45 23 67 22 67 0.97 2 2 0.8 2e+03 -1.3 1.0 3 13 100 110 99 114 0.84
Sequence Information
- Coding Sequence
- ATGTCTACAAGTAATTCAAATAACAGTGCCAGTGTGAAACGTAAACGATCTGTTAATCCACAAGGCGATGAGAATTTCATACGCGCTTTGGAAGCAGTGCGTTCGGGTGGTATCGGTTTTTGTAAGGCTGCAAAACTGTACGGTGTCAATAATCGCACGCTATGGTTAGAATATAAGAAACGGGGCTATCCCGTATCTCGACCGAGTATAAAATCGCGTGTCGTCAAACAAGAACCGAATTTGTCGCCGTCACCTACCCCGCCCGCTAACACTGCCGATGATACAAATGAAAATTATGAACATATGGCGGCAGCTGTCGCGGCTGCACAAACTGCCGCTCTTAATATGCAAATACCACCGACTTCCGATACGCCGACACCTTCGTTAATGTGCACACCTCACCATGCCGGCACAACGGCTAGTGCTGGCACTCATCCCACAATGATGAGTTTTCTCGACACGCGACATATTGACTTTCCTCCCAGTCTGCACTCCATGTCCAGACAACGATACATTGATGCCACAGGCGCGAGTGGGGGTCCCGGCGCGGGCACTATCAATTATATTCTTTTACCTTGGCCTCCCACAAAACTTTTAGCTCAAAATACAGGGACATTTATATTAGATAAACATCAACAGCATATGTAA
- Protein Sequence
- MSTSNSNNSASVKRKRSVNPQGDENFIRALEAVRSGGIGFCKAAKLYGVNNRTLWLEYKKRGYPVSRPSIKSRVVKQEPNLSPSPTPPANTADDTNENYEHMAAAVAAAQTAALNMQIPPTSDTPTPSLMCTPHHAGTTASAGTHPTMMSFLDTRHIDFPPSLHSMSRQRYIDATGASGGPGAGTINYILLPWPPTKLLAQNTGTFILDKHQQHM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00750382;
- 90% Identity
- iTF_00750382;
- 80% Identity
- -