Gfus016249.1
Basic Information
- Insect
- Glossina fuscipes
- Gene Symbol
- retn
- Assembly
- None
- Location
- Scaffold161:4099-60335[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7 5.5e+03 -2.0 0.0 42 65 94 116 84 130 0.76 2 2 7.4e-26 2.4e-22 79.2 0.0 2 89 261 346 260 346 0.96
Sequence Information
- Coding Sequence
- ATGATGGAGGTGTTGGCGCCAAATCTTACGGGAAAGATATCACATGATGATCATACGGATGATGAAATGCGTGACTGTGATTCAGTTGAAGGAGAGCAGCAGCAACAACATATCGGTCGTAGCGAGCATTTAAATACGTCTTTACCATCGAACGGAGGTAACATGAAATATAGCGCCGTCGGTCGGCGTACTCCCGTAGACCATGCCAATGATATGTCAATGAGTCATCATCATCATTTTCCATCAAATCATCCGTTAAACGCTTTACGTGATTTTATAAGTATTGGAGGCCTGCATAGTATACAAAATTTGCAGCATAGCGATGTCTTGGAGAAATTAAAAATGCAAGTTCCTGATATGAAAGTTGGTTTAATGGAACAAGATTATGCCGTACATGCGGCTGCTTTCGGAGGAAATGTACTACCTGCCCCAATTACTACAGCTTTTACTATGCCACCAACTACAATGCCACCATTTAGTCACGTACCTCAAGGTGTAGTTGCTCAGTCCGGTAACAACGTTATAACGTGCAATACACACATTAATTCCATCCAAACTTCAACGTCAAGTGGCGTTTCAATGCTTAATGGCTGCAATAGTAATAATAGCAACTTCTCATTTACATCACCCACCGCTCCTAGTACAAAAGATGTGAATCCCGTTTCTAACACGTCAGCATCAAGCGATACATCAAATTCGTCTCAACAGAATAATGGCTGGAGTTTTGAAGAACAATACAAACAAGTCAGACAGCTTTATGAAATCAATGATGATCCCAAACGCAAAGAATTCCTCGATGATTTATTTTCATTTATGCAAAAACAGGGTTCGCCGATAAACCGTTTACCCATAATGGCAAAATCCGTACTGGATTTGTACGAATTATACAATTTGGTAATTGCTCGCGGGGGATTAGTCGATGTTATTAATAAAAAGCTATGGCAAGAGATTATAAAGGGACTGCACTTACCGTCAAGCATAACAAGTGCAGCATTTACGCTGAGAACGCAATATATGAAATATCTTTATCCGTACGAATGTGAAAAGAAAAATTTGAGTACACCCGCCGAACTGCAAGCAGCGATCGATGGCAATCGTCGTGAAGGACGTCGTTCTAGCTATGGCCAATACGAGGCCATACATAATCAAATGCCAATGCAACAAATGGCCCGACAAAGTTTGTCAGGTGGCTTGCAACAAATGTCGCCGCTGGCATTGGTTACACATGCCGCCGCCGCTAATAATCCACAAGCTGCTGCACAGGCTGCTGCTGCCGCAGCACACCATAGACTGATGACTGCTCCCGCCTTTGCCCAAGTGCCGAATTTGATGTCTCACGATTTTGAGCAACGCATGTTGGAATACTTGAAACTGCTTCAAGCGAACAAAGAGCAGAATGTAGAGGCGGCGGCATCCGCCATTAGCAACAGTAACGGCAATGGACACCCAATGACACATTCACAGCAACAATCGGCCCAACAACATCAGTCGACATCACGCCAGAGATCGCAAAGTCCCGATGTTAGTCAACATGAAGCTTTCAATGTATTGGGAATGTCACGTGTAGCGTTATGGCAAATGGTTAACAATCATGCAAGTCCACCCGTCTCAGTGAATGCATCTCTACATGGCGAAGGTGATAGCAGCGGTGATGTCGGCAACGGTAACGTCAAAACTGCCAGCGAAATATCAGGCATTAAACGTGAACACGTAACTAGTCCAGAGCAATATGGACGAGAAGACTTCTTCAACCATCAGCCGCCGCCAACAAAACGAGCTAATTTTTACATACCGGTCGCTCCTAATTTCCAATATAAAGACAACGACTCGAATGGTGATCCTCATCAAGAACCTGACGAAGATGACGGTGAACAAAATTCAACGGCGAATTCCTCACCTGGAGATGCAAATGAAAGACCCTTAAATGGTGTACCTGGTCATCTGCCGGCGTTCCAAGACATGAGCAACAGCGTACACCACGACAAATCTGATGATTCTGCCATAGAAAACTCACCGTCGACGTCGGCCGCGTCTGGAGCTACAACTCGAGTCTCGCCGGTATCAACCAAGAAAATTCATTTATCTAAGCAAGTCCATCACACTACCGACCCCTCTAGCGACAACCCTAACGGCGTCGACAAATTAACTGCGTGTAACTCAGCTTTCGATTTATTATCTGGTTTGCAATTCCGAGTGACACGTAATGATATTAGTACAAATGGTGAACACCATCTTACAGTAAATCTGGAATTAAATGGTGTCACGTACTCGGGAATACTTAATGCAAATATTTCAGGTGCTACCAAAACGACGAAAACCGAAAGCAACATTGTCGACAGCGGCAAGAATAACGATAATGATGGTAACAAAGTAAACTGTGTTGGTAATCATTCTGCCAGCACAAGCAATACCTATGCAAGCACATTTGAACAGCCGAAGGTCGTGGACTCTGCGATCTCTGAGACCGTAAGTGATACTGAAACGCCATCAAAAAGACCGACAGCTATCGTCACGTCAAATGGATCAACCAAGGCCTCGCTCAATAATACTTTAATCTCATCATAG
- Protein Sequence
- MMEVLAPNLTGKISHDDHTDDEMRDCDSVEGEQQQQHIGRSEHLNTSLPSNGGNMKYSAVGRRTPVDHANDMSMSHHHHFPSNHPLNALRDFISIGGLHSIQNLQHSDVLEKLKMQVPDMKVGLMEQDYAVHAAAFGGNVLPAPITTAFTMPPTTMPPFSHVPQGVVAQSGNNVITCNTHINSIQTSTSSGVSMLNGCNSNNSNFSFTSPTAPSTKDVNPVSNTSASSDTSNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKQGSPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAIHNQMPMQQMARQSLSGGLQQMSPLALVTHAAAANNPQAAAQAAAAAAHHRLMTAPAFAQVPNLMSHDFEQRMLEYLKLLQANKEQNVEAAASAISNSNGNGHPMTHSQQQSAQQHQSTSRQRSQSPDVSQHEAFNVLGMSRVALWQMVNNHASPPVSVNASLHGEGDSSGDVGNGNVKTASEISGIKREHVTSPEQYGREDFFNHQPPPTKRANFYIPVAPNFQYKDNDSNGDPHQEPDEDDGEQNSTANSSPGDANERPLNGVPGHLPAFQDMSNSVHHDKSDDSAIENSPSTSAASGATTRVSPVSTKKIHLSKQVHHTTDPSSDNPNGVDKLTACNSAFDLLSGLQFRVTRNDISTNGEHHLTVNLELNGVTYSGILNANISGATKTTKTESNIVDSGKNNDNDGNKVNCVGNHSASTSNTYASTFEQPKVVDSAISETVSDTETPSKRPTAIVTSNGSTKASLNNTLISS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00749480;
- 90% Identity
- iTF_00749480;
- 80% Identity
- -