Gbre007055.1
Basic Information
- Insect
- Glossina brevipalpis
- Gene Symbol
- SMARCC2
- Assembly
- GCA_000671755.1
- Location
- Scaffold91:183580-190361[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.9 2.7e+03 -1.7 0.1 34 43 204 213 203 214 0.87 2 3 1.2e-14 1.1e-11 44.3 0.2 3 44 649 690 647 692 0.95 3 3 3 2.7e+03 -1.7 0.0 23 40 749 767 747 767 0.91
Sequence Information
- Coding Sequence
- ATGAATACTTTAGGTCCGAAAGAAGATGGTGGTCCAAATGTAGAGTTCTTTAATTCTCCCGAATCATTGCAAGGTTTTGAAACAATACGTTTATGGTTGCAGAAAAATTATAAAAAATATTTAACAAATAGCAGTGAACCTATAACGAAGGAAAGTTTAGCACAACTGTTAATTCAATTTTTGCAGTATGTGGAAGCTAAATTGGGTAAGAATTCCACAAAGCCGCCGGCGACGCGTATACCGATGCGCTGCTTTTTGGATTTCAAGCCCAATGGAGGCCTTTGTATTATATTTGCAACAATGTTTCGTTTTCGTGCTGAACAAAGAGGaaaaaaaTTTGATTTTGCTGTTGGCAAAAATCCCAGTAAAGATCCAAATATTCAATTGTTAAGCGATATTGAACAGTCTTTAGTCGAAGCAGATCTTTATCGAATTCCAAATATTTATATAAGACCTGAAGTAGATATGGACAATCAGTTGGCAACACGTTTGCGTGAAATCCTAGATATGCGCCGTGTGGATATAGTTTCAAGTGAAGAGGAAGCTACACATATTATTTATCCCGTAGTAGATCCACATCATGATGAATACGCTCGTCCTGTTTTCAAACGTGGAAATCATGTTATGCTACACTGGTACTGCTTACCTGAGTCATATGATACTTGGACGCCAAATATTTTCGATTTGCCTGATAATGTTCCCGAAAATCCTGAGTCGCCAATTGAACGCTGGCGAGTGTCGGCATCTTGGATTTTAGATTTGGAACAGTACAACGAATGGATGGCTGAAGAGGATTATGAAGTGGATGAAATGGGTAAAAAGAAAATGCATAAGCAACGTTTATCCGTAGATTACATAATGTCTTTTGGTACGGACGATaaaaaaaaGTCAAGTAGTGCAGGAGGGACGAAACAAAAGCGTAGACGATCGCCTTCACCTGGCTCATCATCATCAAAACCTGGTAAACGCAAACGTTCTCCAGCTGTAATACATAAAAAAGCTCGCAATGATGACGATGACGAGGATCTGACACGTGATATGGATGACCCACCTTCGGAAACCAATTTACAGGAAGTTATTAAGACATCATCTTTGCAATCTACCGCTAGCCCTGCACTTGGCAATAAATCTAGAGGTGATAACGATATGATGCCAATAAAAGGCGGTACACTTACCGATTTGGATGATGAAATGACCGGAGGTAGTGCTGCTCAAGCATTGTCTACATGCGATGGTGAAAATTCACAAACTGGCAAAACGAGCGATAATAGCAATACGCAAGAGTTCTCTTCATCTGCTAAAGAGGATGTAGAAGACAACGTTACTGAGCAAACACATCACATTATTGTTCCGTCATATTCGGCTTGGTTTGATTATAATTCAATACACACAATTGAAAAACGGGCTATGCCCGAATTCTTTAATTCGAAAAATAAATCTAAAACACCGGAGATTTATATGGCGTATCGCAATTTCATGATTGATACTTATCGACTTAATCCTACTGAATATTTAACTAGTACAGCTTGCCGTCGAAATCTCGCTGGCGATGTTTGTGCTATAATGCGAGTTCATGCTTTCCTCGAACAATGGGGATTAATCAATTATCAGATTGATGCTGAACTACGTCCAACTCCGATGGGGCCACCACCCACCTCACATTTTCATATTCTATCGGATACTCCTTCCGGCTTACAGTCACTAAATCCACAAAAGACTCAACAGCCCTCAGCTGCTAAAACTTTACTTGATCTCGATAAAAAGCCTATAGTTACAGCTATAAAAGAAGGCAAAGAGGATTCGTTAGATAAAGCACCGGTAACTCTAAAACCGGAACCTGTGGAAAATGGGACAAATACTTCAAGCCAGTTCGGTCTAAAATTGGATCAATACGTaaaaaaaCCAGCTGCGATGAAAAATCGCACTGCAGCAAGCATGTCACGCGAATGGACAGATCAAGAAACTCTGCTACTGTTGGAAGGATTAGAATTGCATAAGGATGATTGGAATAAAGTGTGCGAACATGTTGGCACTCGAACTCAGGATGAATGCATATTGCACTTTTTGCGTTTACCCATCGAAGACCCTTATTTAGAAGATGATGGCGGTTTTCTAGGTCCCTTAGGTTGTCAACCGATACCATTTAGTAAATCTGGCAATCCAATAATGTCTACAGTTGCATTTTTGGCGTCAGTAGTCGATCCCAGAGTAGCGGCGGCCGCCGCTAAAGCTGCGATGGAAGAGTTTGCAGCCATTAAAGATGAAGTGCCAGCCACCATAATGGATAACCATGTGAAAAATGTTGAAAAGGCCTCGGCAGCTGGGAAATTTAATCCAACTTATGGTTTGGCTAATAGCGGCATCGCTGGTACTGGAACCGACAAAGAAGATGATGATGTTAATACCATTGCTCCTGTTGGTACTCTTCCTGGTCCTGCTGATGAAGAAATGAAAGATATAACAAAGAAAGAAGATGTATCTGGTGGGACACCGTCTGTTGATGCCAGGGAAGAGAGTGGAATTGATGGTGAGAGTTTAAAAGAAACTGATTCCAAGCAAATATTTAATGAGGCAAACGTGCAAACGGCTGCAGCTGCTGCGTTGGCATCAGCTGCAGTAAAAGCAAAACATTTGGCGGCATTAGAAGAACGCAAGATCAAATCTTTGGTTGCGTTATTGGTAGAGACCCAAATGAAAAAATTGGAAATAAAACTGCGACATTTTGAAGAACTTGAAACGACGATGGAACGTGAACGGGAAGGCTTAGAATATCAGCGACAGCAATTGATAACTGAACGTCAACAATTCCACTTGGAACAATTAAAGGCAGCCGAATTCCGAGCGCGGCAGCAAGCTCATCATCGTTTACAGGAACAACAATGGCAAGGAACATCACCAGCGGCAGCTGGATCGGCATCTACTGGTACCTTGCCAGCTGGTAATCATTCCATTATTAGTGGTCAGCCAAGTACTGGACCTCAGATCGGTTCTAGCGGTAATATGCCTAGCGCTCTTAACGCTCCTCAAGCGTCTCCTCATGTAACCGGACCAAGCGCTGCGACTGCTTCGCATGCTGCTGCAACTACAGTTGTAGGTGGTACTCCACTATCTGGACAAGCAACAGTATCTATGGATGCTAATTCAGCAGTGTCACTTGCAGTTTCTGATGGCTCACAAAGTACATGCGTTGCAAATCAACAACTGCCCCAAACAAATCCAACTACTCCCATTCCGACAACGCATATCAGTGCAGGCTCTCTGCAGCAGACGCCAAATGTTACTACACCGTCATCTGGAATTCCGCCTTCTTAA
- Protein Sequence
- MNTLGPKEDGGPNVEFFNSPESLQGFETIRLWLQKNYKKYLTNSSEPITKESLAQLLIQFLQYVEAKLGKNSTKPPATRIPMRCFLDFKPNGGLCIIFATMFRFRAEQRGKKFDFAVGKNPSKDPNIQLLSDIEQSLVEADLYRIPNIYIRPEVDMDNQLATRLREILDMRRVDIVSSEEEATHIIYPVVDPHHDEYARPVFKRGNHVMLHWYCLPESYDTWTPNIFDLPDNVPENPESPIERWRVSASWILDLEQYNEWMAEEDYEVDEMGKKKMHKQRLSVDYIMSFGTDDKKKSSSAGGTKQKRRRSPSPGSSSSKPGKRKRSPAVIHKKARNDDDDEDLTRDMDDPPSETNLQEVIKTSSLQSTASPALGNKSRGDNDMMPIKGGTLTDLDDEMTGGSAAQALSTCDGENSQTGKTSDNSNTQEFSSSAKEDVEDNVTEQTHHIIVPSYSAWFDYNSIHTIEKRAMPEFFNSKNKSKTPEIYMAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQIDAELRPTPMGPPPTSHFHILSDTPSGLQSLNPQKTQQPSAAKTLLDLDKKPIVTAIKEGKEDSLDKAPVTLKPEPVENGTNTSSQFGLKLDQYVKKPAAMKNRTAASMSREWTDQETLLLLEGLELHKDDWNKVCEHVGTRTQDECILHFLRLPIEDPYLEDDGGFLGPLGCQPIPFSKSGNPIMSTVAFLASVVDPRVAAAAAKAAMEEFAAIKDEVPATIMDNHVKNVEKASAAGKFNPTYGLANSGIAGTGTDKEDDDVNTIAPVGTLPGPADEEMKDITKKEDVSGGTPSVDAREESGIDGESLKETDSKQIFNEANVQTAAAAALASAAVKAKHLAALEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHHRLQEQQWQGTSPAAAGSASTGTLPAGNHSIISGQPSTGPQIGSSGNMPSALNAPQASPHVTGPSAATASHAAATTVVGGTPLSGQATVSMDANSAVSLAVSDGSQSTCVANQQLPQTNPTTPIPTTHISAGSLQQTPNVTTPSSGIPPS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00748910; iTF_00746643; iTF_00749625; iTF_00749624; iTF_00746644; iTF_00750395; iTF_00748155;
- 90% Identity
- iTF_00746643;
- 80% Identity
- -