Gaus006808.1
Basic Information
- Insect
- Glossina austeni
- Gene Symbol
- SMARCC2
- Assembly
- GCA_000688735.1
- Location
- Scaffold423:20028-23886[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.6 3.3e+03 -1.6 0.1 34 43 202 211 200 212 0.88 2 2 1.2e-14 1.5e-11 44.3 0.2 3 44 645 686 643 688 0.95
Sequence Information
- Coding Sequence
- ATGAATACTTTAGGTCCGAAAGAGGATGGTGGTCCAAATGTAGAGTTTTTTAATTCTCCCGAATCGTTGCAAGGTTTTGAAACAATACGTTTATGGTTGCAGAAAAATTGCAAAAAGCAATTGGCCAGCGAACCCATAAGTAAGGAGAGTTTAGCACAATTGTTAATTCAATTTCTCCAGTATGTGGAAGCAAAATTGGGCAAGAATTCCACAAAGCCGCCAGCGACACGCATACCGATGCGTTGTTTTATGGATTTCAAACCGAATGGAGGCCTATGTTATATATTTGCCGCTATGTTTCGTTTTCGTGATAAACAAAAGGGGAAAAAATTTGATTTTACAGTCGGCAAGAATCCGATAAAAGATCCAAACATTCAATTACTGAGTGATATTGAACAGGAATTGGTTGAAGCAGATCTTTATCGAATTCCATATATCTATATAAGACCTGAAGTCGATATGGACAAGCAATTGAGCACACGTTTGCGTGAAATCCTAGCTACGCGTCGTGTGGAGATAGTGTCAAATGAAGAAGATGCTACGCATATTATTTATCCCGTAGTCGATCCGCACCACGATGAATACGCTCGCCCCACTTTCAAACGTGGAAACCATGTTATGTTGCATTGGTACTGCTTGCCGGAATCATATGACACTTGGACACCAAATAATTTCGATTTGCCTGATAATATTCCCGAAAATCCCGAGTCACCAATCGAACGCTGGCGAGTATCGGCTTCGTGGATTTTAGACTTGGAACAATACAACGAATGGATGGCTGAAGAGGATTATGAAGTAGATGAAGCGGGTAAAAAGAAAATGCATAAGCAACGTTTGTCCGTAGACTATATAATGTCATTTGGAAGTGATGATAAGAAAAAGTCTAGTAGCGCAGGGGGAACGAAACAAAAGCGCAGACGTTCGCCTTCACCTGGGTCATCAAAACCTGGCAAACGCAAGCGTTCTCCAGCCGTAATACATAAGAAATCTCGTAATGATGATGACGATGAGGATTTAACACGTGATATGGACGATCCATCTTCAGAAACAAATTTGCAAGAAGTTATTAAAACATCATCCTTGCAATCTACTGCTAGTCCTGCACTTGGCAATAAATCTAGAGGTGATAATGATATGATGCCAATCAAAGGGGGTACAATTACCGATTTGGATGATGAAATGACTGGAGGTAGTGCTGCACAAGCATTGTCTACCTGTGATGGTGAAAATTCGCAAACTGGTAAGACGAGCGATAACAGCAATACGCAAGAGTTCTCTTCATCTGCTAAAGAAGACGTGGAAGACAATGTTACTGAGCAAACACATCATATAATTGTTCCATCATACTCGGCCTGGTTTGATTACAATTCAATACACACGATTGAGAAACGAGCTATGCCCGAATTCTTTAATTCGAAAAATAAATCCAAAACACCGGAGATTTATATGGCTTATCGCAATTTCATGATTGATACTTATCGACTCAATCCTACCGAATATTTAACCAGCACAGCCTGCCGTCGAAATCTCGCTGGCGATGTGTGTGCTATAATGCGTGTTCACGCTTTCCTTGAGCAATGGGGATTAATCAACTATCAGATTGATGCCGAATTACGTCCCACACCTATGGGGCCACCACCCACCTCACATTTTCATATTCTCTCGGATACTCCATCCGGTTTGCAATCACTGAATCCTCAAAAGACTCAACAGCCATCAGCTGCTAAAACTTTGCTCGATCTCGACAAAAAACCCATAATTACAGCTATAAAAGAAGGCAAAGAGGATTCGTTAGATAAAGCTCCGGTAACTGTAAAAACGGAACCTCTGGAAAATGGGACAAATACTTCAAGCCAGTTTGGCTTAAAACTGGATCAATATGTaaaaaaaCCGGCTGCAATCAAAAATCGTACGGCAGCAAACGTGTCACGTGAATGGACAGATCAAGAAACTCTTCTACTATTAGAAGGATTGGAATTGCATAAAGATGACTGGAATAAAGTCTGCGAACATGTTGGCACTCGCACTCAAGACGAATGCATATTGCATTTTTTGCGTTTACCCATTGAAGATCCTTATTTGGAAGATGATGGCGGCTTTCTAGGTCCTTTAGGTTGTCAACCGATTCCGTTTAGTAAGACTGGCAACCCAATAATGTCTACGGTTGCATTTTTGGCCTCTGTGGTTGACCCAAGAGTAGCGGCGGCTGCCGCTAAAGCTGCGATGGAAGAATTCGCAGCCATTAAAGACGAAGTGCCAGCCACCATAATGGATAACCATATGAAAAATATTGAAAAGGCCTCGGCAGCTGGAAAATTTAATCCTACCTATGGCTTGGCTAATAGCGGTATAGCTGGCACTGGAACCGACAAAGATGATGATGATGTTAATAACGTTGCTACCGTAGGCGCACTTCCCGTTTCTGCTGATGAAGATATGAAGGATTTGACAAAGAAAGAAGATATGTCCGGTGGAACGACATCTATTGATGTAAGGGGGGAGGGTGGAATTGATGGTGAGACTTTAAAAGAAACTGAGTCTAAACAAATATTTAATGAGGTGAACGTGCAAACGGCTGCAGCTGCTGCGTTAGCTTCAGCAGCAGTGAAGGCAAAACATTTGGCGGCATTAGAAGAACGTAAAATCAAATCTTTGGTTGCGTTATTGGTAGAGACTCAAATGAAAAAATTAGAGATAAAATTGCGACACTTTGAAGAACTTGAAACGACAATGGAACGTGAACGAGAAGGCTTAGAATATCAACGACAGCAATTGATTACTGAACGTCAACAGTTCCACTTGGAACAATTGAAGGCAGCTGAATTTAGGGCGAGGCAGCAAGCTCATCACCGTTTACAAGAGCAACAATGGCAAGGAACATCGCCAGCCGCAGCTGGATCCACGTGTGCAAGTACTTTACCAGCTGGTAATCATTCCATTGTTGGTGGCCAACCAAACGCCGGATCACAGATATGTTCTGGCAGCAATATGCCAAGCGCTCTTAGCGCTTCTCAAGCGTCTCCCCATGTTAGTGGACCAAGCGCTGCGACCGCTTCACATGCCGCTGCAACTACCGTCGTAGGTACTCCATTATCCGGGCAAGCAACAATGTCTATGGATGCTAGTCCCGCAGTATCACTAGCAGTTTCAGACGGTTCGCAAGGATCCTGCATTGCGAATCAGCAACTGCCGCCAACTGCTCCCATTCCATCAACCCATATCAGCACAGGACCTCTGCAGCAGACACCAAATATTGCTACAACGCCATCTGGAATTGCGTCTTCTTAA
- Protein Sequence
- MNTLGPKEDGGPNVEFFNSPESLQGFETIRLWLQKNCKKQLASEPISKESLAQLLIQFLQYVEAKLGKNSTKPPATRIPMRCFMDFKPNGGLCYIFAAMFRFRDKQKGKKFDFTVGKNPIKDPNIQLLSDIEQELVEADLYRIPYIYIRPEVDMDKQLSTRLREILATRRVEIVSNEEDATHIIYPVVDPHHDEYARPTFKRGNHVMLHWYCLPESYDTWTPNNFDLPDNIPENPESPIERWRVSASWILDLEQYNEWMAEEDYEVDEAGKKKMHKQRLSVDYIMSFGSDDKKKSSSAGGTKQKRRRSPSPGSSKPGKRKRSPAVIHKKSRNDDDDEDLTRDMDDPSSETNLQEVIKTSSLQSTASPALGNKSRGDNDMMPIKGGTITDLDDEMTGGSAAQALSTCDGENSQTGKTSDNSNTQEFSSSAKEDVEDNVTEQTHHIIVPSYSAWFDYNSIHTIEKRAMPEFFNSKNKSKTPEIYMAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQIDAELRPTPMGPPPTSHFHILSDTPSGLQSLNPQKTQQPSAAKTLLDLDKKPIITAIKEGKEDSLDKAPVTVKTEPLENGTNTSSQFGLKLDQYVKKPAAIKNRTAANVSREWTDQETLLLLEGLELHKDDWNKVCEHVGTRTQDECILHFLRLPIEDPYLEDDGGFLGPLGCQPIPFSKTGNPIMSTVAFLASVVDPRVAAAAAKAAMEEFAAIKDEVPATIMDNHMKNIEKASAAGKFNPTYGLANSGIAGTGTDKDDDDVNNVATVGALPVSADEDMKDLTKKEDMSGGTTSIDVRGEGGIDGETLKETESKQIFNEVNVQTAAAAALASAAVKAKHLAALEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHHRLQEQQWQGTSPAAAGSTCASTLPAGNHSIVGGQPNAGSQICSGSNMPSALSASQASPHVSGPSAATASHAAATTVVGTPLSGQATMSMDASPAVSLAVSDGSQGSCIANQQLPPTAPIPSTHISTGPLQQTPNIATTPSGIASS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00747400;
- 90% Identity
- iTF_00748910; iTF_00749625; iTF_00747400; iTF_00749624; iTF_00746644; iTF_00750395; iTF_00748155;
- 80% Identity
- -