Gbre005315.1
Basic Information
- Insect
- Glossina brevipalpis
- Gene Symbol
- dl_4
- Assembly
- GCA_000671755.1
- Location
- Scaffold28:884656-886017[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-65 5.1e-62 208.5 0.1 1 169 11 177 11 177 0.99 2 2 0.035 84 2.8 0.1 34 113 297 387 284 441 0.66
Sequence Information
- Coding Sequence
- ATGCAAACAGAAAATTTGCAAACTCCTTACGTCGAAATAGTAGAACAGCCAGCTGATAGAGATCTGAGATTCCGTTACGAATGTGAAGGTCGATGGGCTGGTGCTATACCGGGAGTTAACTCAACTCCTGAGAAGAAAACATATCCAAAAATAGCAATAATTGGATATAAAGGTCCGACTGAAGTAATCGTATCGTGCGTCACAAAGGATGAACCATATAAGCCCCATCCACATAGATTGGTTGGCTCAGAATGCAAAGAAGGCATTTTTAAAGCGATTATTAATGAGGAATCTATGTCAATTGAATTTAGACATTTGGGTATACAATGTGTAAAGAAAAAGGAAATCGATGCAGCGTTAAAGGAACGTCAAGCGAAAAACGTGGATCCCTTCAGTACAGGATATGAACATCGATTACATCCAGCTAATATCGATTTGAATTGTGTGAGATTATGTTTCCAAGTGTTCATATATATCGGAACGACTAAGTACGCTCTTACTCCTGTAGTATCGCAACCTATTAAGGACAAAAAGTCAATGACTGATCTTGTAATCCGCCGTTTATGTACTTGTGCGGGCACTGTGGAAGGCAACACCGAAATGATTTTGTTATGCGAAAAAGTTTCGAAAGCAGATATTAAGGTGCGATTTTTTGAGCAAAGCACTGGTTGGACAGCTTATGGATCGTTTGATCAAAAAGACGTTCACAAACAGACGGCCATCGTATTTAGGACACCACAATATTATAATCTTAATATAACGAAACCAGCTGTAGTTGCCATACAGTTAGAACGAATATCGGATGGAAAGTTAAGCAAACCATACGACTTCGATTATATACCTTTAGACGTTGCTCCGGGATATTTAAAACAAAAACGTCAAAGAATGAATCCAATGGGTGATCCTCAGTATCATTTAATGAATTATGGCGGGAACGTGACATCTTTCAATCAAATGAACATAAAGCGCCATCAAAATGATATAAAACCATACGCACCGTCAATATTAGCCTTTGATAATAATAATTGTAATAATAGGACTTCTTGCATGCGAATGCGAAACAATTTAAATCAATTTCATCAACAAACACAAAACGCAGGGAATAACCTGGGAATGAATACCGTCTCATGCTCGCAAATGTTTAACAACTTCAACCAATTTAATCAAGCAACACAATATAATATGACTTATCAAAATGTGGGAGCTTCGGTCAATGGAAGAATACTGAGTAATGGTCAACAAAACATACCATTAAGTAACATTAACGACCCCGCCCTAATGAAGAGTGAAGAATTCCAACAAATTTTACAAATGAATGAAAACCAGATACCAATAGGTGGTTTATCAAATCTCTCTCTCTAA
- Protein Sequence
- MQTENLQTPYVEIVEQPADRDLRFRYECEGRWAGAIPGVNSTPEKKTYPKIAIIGYKGPTEVIVSCVTKDEPYKPHPHRLVGSECKEGIFKAIINEESMSIEFRHLGIQCVKKKEIDAALKERQAKNVDPFSTGYEHRLHPANIDLNCVRLCFQVFIYIGTTKYALTPVVSQPIKDKKSMTDLVIRRLCTCAGTVEGNTEMILLCEKVSKADIKVRFFEQSTGWTAYGSFDQKDVHKQTAIVFRTPQYYNLNITKPAVVAIQLERISDGKLSKPYDFDYIPLDVAPGYLKQKRQRMNPMGDPQYHLMNYGGNVTSFNQMNIKRHQNDIKPYAPSILAFDNNNCNNRTSCMRMRNNLNQFHQQTQNAGNNLGMNTVSCSQMFNNFNQFNQATQYNMTYQNVGASVNGRILSNGQQNIPLSNINDPALMKSEEFQQILQMNENQIPIGGLSNLSL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -