Basic Information

Insect: Glossina austeni
Gene Symbol: -
Assembly: GCA_000688735.1
Location: Scaffold410:12865-17470[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.0015 0.11 13.1 0.0 1 23 133 156 133 156 0.97

2 14 0.00059 0.045 14.3 2.8 2 23 205 227 201 227 0.94

3 14 0.0079 0.6 10.8 0.5 1 23 353 376 353 376 0.90

4 14 0.088 6.7 7.5 0.9 2 23 425 447 424 447 0.90

5 14 0.00028 0.021 15.4 0.2 1 23 507 530 507 530 0.91

6 14 8.7 6.6e+02 1.2 0.0 2 14 549 561 548 565 0.82

7 14 0.00063 0.048 14.3 1.5 2 23 581 603 581 603 0.97

8 14 0.00011 0.0084 16.6 1.1 1 23 694 717 694 717 0.96

9 14 1.7e-05 0.0013 19.2 0.1 1 23 775 798 775 798 0.95

10 14 0.044 3.3 8.4 2.7 2 23 848 870 847 870 0.95

11 14 0.066 5 7.9 0.8 1 23 943 966 943 966 0.92

12 14 0.39 29 5.5 0.8 1 20 1018 1037 1018 1039 0.94

13 14 0.0032 0.24 12.0 0.1 3 23 1125 1146 1123 1146 0.95

14 14 0.89 67 4.3 3.8 2 23 1196 1218 1195 1218 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.0015	0.11	13.1	0.0	1	23	133	156	133	156	0.97
2	14	0.00059	0.045	14.3	2.8	2	23	205	227	201	227	0.94
3	14	0.0079	0.6	10.8	0.5	1	23	353	376	353	376	0.90
4	14	0.088	6.7	7.5	0.9	2	23	425	447	424	447	0.90
5	14	0.00028	0.021	15.4	0.2	1	23	507	530	507	530	0.91
6	14	8.7	6.6e+02	1.2	0.0	2	14	549	561	548	565	0.82
7	14	0.00063	0.048	14.3	1.5	2	23	581	603	581	603	0.97
8	14	0.00011	0.0084	16.6	1.1	1	23	694	717	694	717	0.96
9	14	1.7e-05	0.0013	19.2	0.1	1	23	775	798	775	798	0.95
10	14	0.044	3.3	8.4	2.7	2	23	848	870	847	870	0.95
11	14	0.066	5	7.9	0.8	1	23	943	966	943	966	0.92
12	14	0.39	29	5.5	0.8	1	20	1018	1037	1018	1039	0.94
13	14	0.0032	0.24	12.0	0.1	3	23	1125	1146	1123	1146	0.95
14	14	0.89	67	4.3	3.8	2	23	1196	1218	1195	1218	0.94

Sequence Information

Coding Sequence: ATGGATGAACTCGAACCTTGGCATCTTTTTACCAATGATTTTTTGCCCGACGTATCGAATAATGCGAATCGAGAACAAAATCCTTTAAATTCATATAACGATTCAGCACCCAATATACGAAATATGCAGGTAAAAGAAGAGCCTGTAGAACCTTTAGAAATTATTAATGATGATCAAAGCTCCTCCTATGGTTACATGAACCATTCATCATTTAGTAATACTCAATGCCAACAATATGAGCGTTGCGACGATGATAATACAATATTTGATTTTGGACTTGATTCGTCTTCAGGCGGCAAAGATTCGACTGTTAAAACCTCTTCCACTGATTTTAAACCTTTGTCTGCTGAAGATCAATATTATCACTCGCTTATTAAGTTTGAAGATGCAATTGTTTACATATGTCCCGCTTGCGGTCAAGAATTCAAAGCCCAAGAGTTATGGAAACGTCATTTAAATGTAATCCATCGTTACAATACTCGCAATGGCTTAAATTTTATGCAATTAGATAAATTATATCATCAATGTATGGAGTGTAATAAACGTATCGCAATGCATAGCATGGAAAATTTGCTAAAACACAAGTTCACTCATCTGCCGTACAGATGCAGTAAATGTAGCATTTGCCAACGTCAGTACAAGTATCGCCAAGATTTAATGGTGCACATACGGATGATGCATCGGGACGACTTATTGGCCGCTATCAAAGCTGAACATCAAAATAAACCGAAAACGAGTTTAGCTGTTAAACCTGAAGGTAGCAGCAATAACAATAGTAAACCATGCCTGACTATTGGCGATGTTAAGGAGAATGCTTTCGAAATTTTCGACAATACTGCGGATAATAATATCGAAGTGAAAAATGAGTTTATAGACCCTAATGAGATTGACGATGACCAGGTATCGGTCAATAAAAAACCGGCAGCTAAATCATCAACATCTGCTTTAGCCGCTCTATTGGACGAGGGGTCCTCGAATGGCTCAACCGCTGAAGAAAGACCGCTAAATAAAGCACAGGTCAATATCGATGATGATTCCTTGGAAGAATACATCTTGTTTTTATGCCCTCAATGCGGCACAGAATGTGAAACTCAAGCACAGTGGCGCCAGCATATTGAATTTGTTCATGACTTTGGTTCTTACAAAGCCTTAAACTTCAAAGAACAAAATTCTCAAGCCCAGTGTCTAGAATGCAATCAGATCATCCCCTCCATTGCTTTACGTAGTTTACAAGCGCATAAATTCACTCATTTACCGCACAAAGAGTGGTTGACCTGTAAATTATGTTTTGCATCGTTTTCCATGCAAAAAGATATAACCAAGCACTTGGACGATAAGCATCATTTACACGGGGAGAATGCAAAGTGTACAAGCGTTACAACTAATGCCGTTTCCATGCAAAACGAAGAAGACAGTCAAGATTTCGAAGATTATGATAGTGGTATGGGTGCAGCGGATGTTAAGGAAATTCAACGGTCGAAAAGTGACGAACGTGATGCTTTCGAGCAGCATATCGATTATTTGTGCCCTCAGTGTGGTAAAGAGTACAACGATAAAAAATTATGGCGTAAGCATATAGCGGACGTTCATCAGTTGGCTGATTTAGAGAAATTAAACTTTGAAGTTCTGAATGATCGCCAATTGCGATGTCGCGAATGCGACAAGATTATAACCAATGCTTATGGCATACAAAACGCTCAACAGCATCGCATTACTCATATGAGATTCAAATCATTTGCTCGTTGCCGTTTATGCCGGAAAGCGTACACTGACCGCAAAGGTTTGATTAAACATTTGCGTAGTTCACATCGCGTTGGTATGCGGGGCGTACCTATACGTATGCTATCACCGTCACCCATGGCAGTGGCAAACAGTAGTGTTATGCGTTGGGGTTCGAAACTGAAATCGTATCATAAATCCTATGGGCAAAAAGAAGTCGTCCGCTCAGGTGAATGCACCTATGAAATACATTATTTGGACGAAGATGATGAAGAGTTGGCTAACGCTGACGAAGAATTTGGTGAGAATGCGGATAAACAATTCTCACCTAATAATCATCAATTAGAGCAAATGACAAGACACAGGTGTGTCGATTGTGGATCGCAGTTCTCGACGCAGAATGCTTTGCAAAATCACATTAAAAATGAGCACGACTTCATGGAGTATGACAACTCACCCGGAGACGATAAGCCCCAACCGGTCGCCTCAACAACCGGTAACGACGATGATCAATCAAACGATACAGATGCCGATTTACTTGTGCCAACTGGTGATGTCGATATACAACCCGAGGAGAATACCAGTATTGAAATCAATTTCATTTATTTATGCCCGCAGTGCGGTGAGGAGTTTCGCACTCAAGCTTTATGGCGTCGTCACATCAATGTCGAGCATAATTTTGATAAACGTGAGTATCTCGGCTTTCGTCCAGTTGACAGATTTCGTTATCAATGCAAAGTTTGCAAAGATACCGTACAAAGCTCTAAACTGAAGGGCTTGCAAGATCATAAATTCCGTCATTGCCCCTATAAATTATATTTGAAATGTCTGTTATGCAGCACTAGCTACAATCACAAACCCAATATGTTAACGCATTTACGGCAGCGACACAATATTATTGAGGCCTATGAATTTGGTGCAAATAGCCAAAGTGGTAACAGCTCGAATGTTGGTTACGAAGAGCTTAGTTCCTCATCATCGTCGAAGATTGGCCGGAAAGTCAACGAAAACAGCAGTGCGAATAACAACGGCTCTCGTCCGCCGGGCTTAAGGACCGTAGAGGATGTTATTTCATTTCATAATGCTGTCGATCACGATACCATCACATATTATTGTCCATCATGTTATGAAAATTTTGAATCGCACGTCTATTGGCGTAAACATATTGTTGAGGTGCACAACCTTAATAGTCGAGAAGGACTGAATTTCCGCCAGCTAGATGAACATCACTATATATGCTTGCAATGTTATAAGCGTGTAACTGTTACCCATACAAAGGGGGCCATTGGCCAATTGCAGTCTCACAAATTCCGGCATTTGCCCTACAAATCATTCCGTTGCACTGCCTGCCAGGGAGAATTTGTTCGCAAACAAATGTTCTTTAAGCACTTGGATAAGAACACCAACAAGTGCAATGGCATTAATCCAAATGAAAATGCTTCCGATGAATTTTCGAGTAGCAAAGCGCAAGATAACAGCCAACATCATTCCGATCAGTTTGATGATGACTTGGATTTGAGTGGCGCTTTAGTTCAGCGCAATGGCGCTGACTTTGGTAATAGTAATATGTCGTGGCCGTCACGCGATACCGGAGCTGGCAGCAGCAGTAGCGCTAACTCATACAGCGACACGGTTAGTTGCTTTACCATAAATTGTCCACAGTGTGGCATTAAATTTGATACGACGCAAACTTGGCGCGAGCACATTAACATTGAGCATCAACTTAACAATCGTACAGTACTAAATTTCAAAAGAATCTCACCCAAGCTACATCAATGCTTGGAGTGCAAAGAGCATGTTAATGGTCGCAAATTGCGCGACTTACAAGTACACAAATTCAAACATTTACCGCATGGCGCTTACATACATTGTCGTTACTGTTCGATGGCCTATTTTCATATAAGCAACATGCAGGAGCATTTGAAAAACAAACATCCGCACATGTTAAATAAATTGTCATCGACTGATACGCGCCGTTACGAAGATGAAAACATCATGATAGAGGGCGAGGATGAAGAAGATGGGGATGAGAATCCCGAAATGGATGAAGAAGAGGGCGAAATATTGTATGGTGAAGAAATTGATCCTGCCGATCTGTTAGAAGCCGAAGCCGAAATCGAAGAGGTCGATCCTGATGCCGCTGAATCGGAAGAACAATATCTATTGGGTTAA
Protein Sequence: MDELEPWHLFTNDFLPDVSNNANREQNPLNSYNDSAPNIRNMQVKEEPVEPLEIINDDQSSSYGYMNHSSFSNTQCQQYERCDDDNTIFDFGLDSSSGGKDSTVKTSSTDFKPLSAEDQYYHSLIKFEDAIVYICPACGQEFKAQELWKRHLNVIHRYNTRNGLNFMQLDKLYHQCMECNKRIAMHSMENLLKHKFTHLPYRCSKCSICQRQYKYRQDLMVHIRMMHRDDLLAAIKAEHQNKPKTSLAVKPEGSSNNNSKPCLTIGDVKENAFEIFDNTADNNIEVKNEFIDPNEIDDDQVSVNKKPAAKSSTSALAALLDEGSSNGSTAEERPLNKAQVNIDDDSLEEYILFLCPQCGTECETQAQWRQHIEFVHDFGSYKALNFKEQNSQAQCLECNQIIPSIALRSLQAHKFTHLPHKEWLTCKLCFASFSMQKDITKHLDDKHHLHGENAKCTSVTTNAVSMQNEEDSQDFEDYDSGMGAADVKEIQRSKSDERDAFEQHIDYLCPQCGKEYNDKKLWRKHIADVHQLADLEKLNFEVLNDRQLRCRECDKIITNAYGIQNAQQHRITHMRFKSFARCRLCRKAYTDRKGLIKHLRSSHRVGMRGVPIRMLSPSPMAVANSSVMRWGSKLKSYHKSYGQKEVVRSGECTYEIHYLDEDDEELANADEEFGENADKQFSPNNHQLEQMTRHRCVDCGSQFSTQNALQNHIKNEHDFMEYDNSPGDDKPQPVASTTGNDDDQSNDTDADLLVPTGDVDIQPEENTSIEINFIYLCPQCGEEFRTQALWRRHINVEHNFDKREYLGFRPVDRFRYQCKVCKDTVQSSKLKGLQDHKFRHCPYKLYLKCLLCSTSYNHKPNMLTHLRQRHNIIEAYEFGANSQSGNSSNVGYEELSSSSSSKIGRKVNENSSANNNGSRPPGLRTVEDVISFHNAVDHDTITYYCPSCYENFESHVYWRKHIVEVHNLNSREGLNFRQLDEHHYICLQCYKRVTVTHTKGAIGQLQSHKFRHLPYKSFRCTACQGEFVRKQMFFKHLDKNTNKCNGINPNENASDEFSSSKAQDNSQHHSDQFDDDLDLSGALVQRNGADFGNSNMSWPSRDTGAGSSSSANSYSDTVSCFTINCPQCGIKFDTTQTWREHINIEHQLNNRTVLNFKRISPKLHQCLECKEHVNGRKLRDLQVHKFKHLPHGAYIHCRYCSMAYFHISNMQEHLKNKHPHMLNKLSSTDTRRYEDENIMIEGEDEEDGDENPEMDEEEGEILYGEEIDPADLLEAEAEIEEVDPDAAESEEQYLLG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00747774;
90% Identity: iTF_00750752;
80% Identity: -