Basic Information

Insect: Glossina austeni
Gene Symbol: -
Assembly: GCA_000688735.1
Location: Scaffold63:844635-851378[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 24 0.00016 0.012 16.1 1.1 1 23 214 237 214 237 0.95

2 24 0.00033 0.025 15.1 3.1 1 23 243 266 243 266 0.97

3 24 5.5e-05 0.0041 17.6 0.2 2 23 307 328 306 328 0.97

4 24 0.00079 0.06 14.0 2.4 1 23 406 429 406 429 0.97

5 24 8.7e-05 0.0066 17.0 1.9 2 23 506 527 505 527 0.97

6 24 0.0012 0.09 13.4 1.6 1 20 538 557 538 560 0.93

7 24 0.0029 0.22 12.2 3.6 1 23 634 657 634 657 0.98

8 24 6.5 4.9e+02 1.6 2.0 1 20 664 683 664 685 0.80

9 24 0.058 4.4 8.1 0.3 1 23 696 719 696 719 0.97

10 24 0.0014 0.11 13.2 0.2 2 23 733 754 732 754 0.95

11 24 1.1e-06 8.1e-05 23.0 3.6 1 23 761 783 761 783 0.98

12 24 0.28 21 5.9 3.4 1 23 924 948 924 948 0.93

13 24 0.73 55 4.6 2.9 1 23 985 1008 985 1008 0.94

14 24 0.0051 0.39 11.4 6.1 1 23 1022 1044 1022 1044 0.97

15 24 0.0036 0.27 11.9 2.6 1 23 1053 1075 1053 1075 0.96

16 24 0.019 1.5 9.6 0.3 2 23 1102 1124 1101 1124 0.93

17 24 0.02 1.5 9.5 4.6 1 23 1169 1192 1169 1192 0.97

18 24 0.066 5 7.9 1.0 1 23 1229 1252 1229 1252 0.93

19 24 0.00013 0.01 16.4 4.8 1 23 1289 1312 1289 1312 0.98

20 24 0.0023 0.17 12.5 0.8 3 23 1346 1366 1344 1366 0.95

21 24 4.2e-06 0.00032 21.1 0.4 1 23 1372 1394 1372 1394 0.99

22 24 3.7e-07 2.8e-05 24.4 2.6 1 23 1400 1422 1400 1422 0.99

23 24 0.00012 0.0091 16.5 0.7 1 23 1428 1450 1428 1450 0.99

24 24 0.00071 0.054 14.1 0.1 1 22 1456 1477 1456 1480 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	24	0.00016	0.012	16.1	1.1	1	23	214	237	214	237	0.95
2	24	0.00033	0.025	15.1	3.1	1	23	243	266	243	266	0.97
3	24	5.5e-05	0.0041	17.6	0.2	2	23	307	328	306	328	0.97
4	24	0.00079	0.06	14.0	2.4	1	23	406	429	406	429	0.97
5	24	8.7e-05	0.0066	17.0	1.9	2	23	506	527	505	527	0.97
6	24	0.0012	0.09	13.4	1.6	1	20	538	557	538	560	0.93
7	24	0.0029	0.22	12.2	3.6	1	23	634	657	634	657	0.98
8	24	6.5	4.9e+02	1.6	2.0	1	20	664	683	664	685	0.80
9	24	0.058	4.4	8.1	0.3	1	23	696	719	696	719	0.97
10	24	0.0014	0.11	13.2	0.2	2	23	733	754	732	754	0.95
11	24	1.1e-06	8.1e-05	23.0	3.6	1	23	761	783	761	783	0.98
12	24	0.28	21	5.9	3.4	1	23	924	948	924	948	0.93
13	24	0.73	55	4.6	2.9	1	23	985	1008	985	1008	0.94
14	24	0.0051	0.39	11.4	6.1	1	23	1022	1044	1022	1044	0.97
15	24	0.0036	0.27	11.9	2.6	1	23	1053	1075	1053	1075	0.96
16	24	0.019	1.5	9.6	0.3	2	23	1102	1124	1101	1124	0.93
17	24	0.02	1.5	9.5	4.6	1	23	1169	1192	1169	1192	0.97
18	24	0.066	5	7.9	1.0	1	23	1229	1252	1229	1252	0.93
19	24	0.00013	0.01	16.4	4.8	1	23	1289	1312	1289	1312	0.98
20	24	0.0023	0.17	12.5	0.8	3	23	1346	1366	1344	1366	0.95
21	24	4.2e-06	0.00032	21.1	0.4	1	23	1372	1394	1372	1394	0.99
22	24	3.7e-07	2.8e-05	24.4	2.6	1	23	1400	1422	1400	1422	0.99
23	24	0.00012	0.0091	16.5	0.7	1	23	1428	1450	1428	1450	0.99
24	24	0.00071	0.054	14.1	0.1	1	22	1456	1477	1456	1480	0.89

Sequence Information

Coding Sequence: ATGCCGCAATATTTGTGTAATAATTGCAATGAAAAACTGAAGAATACTAATGAATTTATACAACAATTAATAGAAACCCATGAGTTTTACGAGATTCAGCTTGAAGAAAAAGTTCTTGCTGGATGTACTAACGATCCATTCCTATGGGAAGACTCCCTGCCCTATAGCGAGAAAAACTTGAAAAATGGTAATTCTAACGATAAGGGCTGTATGGTGGATTGCTTAGTGGAAACTGTCATCGATATACCGATTGATGGTGCTCTTAAATGTCAACAAATGGAAAATGATTACCTGCAGATTAAAAAAGAGAGTACGACCGAGAATTGCCACCATTCCGATCTGGGCTGTATCGATGATGAAGAACCTAAGGAGGGGTTTATAAGGGGTAACCAAGTAGAAAAGATTCCATCGGAAACTGTTAACAAAGATTTTCTGCCACCGATAACAAGAGAAGATGATATATCAACTGATAATTTAAATTTCTTACCCAACTTTTCATCTGGTACAGACGACGAGGATGACGAATATATCCCACCAAAACCAAAGATACGAAAATCAATTATAGATAAAAAAGTGAAAACTCGCAAAGGTCGTCCCAGATCTCAGGAGTTTTCGAAAATaaaaaaaaTCAATGACCGTTTCCTTTGTTATATGTGCGACAAAACGTTTTCTTTGCGAAAAGACGTAACACGTCACATAAACACTATACATTCCGATAAGGCTCACTTTCAATGTGAATTTTGTGGCCATCAATTTAAGCGCAAGGATAAAGTGCGGGAACATATAAGAGCTTATCATCAACCCACGCATACGAATACAAATACTTCTAAAAGCATTCCAAATGGAATGAAAAGTAGATTTAACCAATGGAAATACGGTGATTGCTTGTACAGTAAGCCTACTATACGCCGTTTGATTGAATGTAAATTATGTGAAACACGATTTTCAAACGCAGCTGAATTGCGTCAACATCTTGAAACGCATAGAGATTCAAAAACCTTACAACATTTGCAGTTGCGCAGTAATATCGTAAGGCAACTATACCCGAATGCGGATACTATTGAGAAAGCTAGAGAAACTATAGAGAAAGAAAtttttttGAATCAATGGTCACGATTTTATATTATACTTAATGAGCATGGCTATGAAGTTTCGATCAGTGACACTGAAAATGAAGTTGATAGGAGCGACGATGATGAAGTTTACGAAAAACGCTATCAGTGTGAATTGTGTCAACTGAAGTTTTCATATAAATATCAAGTCTTTAGCCATATGAAAGAGCAGCATCGCGAAACTGAGAAGGAAATACCCTATAAATGTAAATTATGTAAACTTGATTTTCTTTGTTCACGTATGTTCGAGCAACATTCGCGTACTCATTGTCGCAATAGGGATAAATCTTTTGTTTGCATACGATGTCCGGCAAAGTTTGCATGGATAGAGAGCATGAGACAACACAATTGTTTGCATAAACCGAGATTTTTGACGGGAACGAAGGATAAAAACAATCCCCTAAAATGTTCCATATGTCGTACGACTTTTAAAACAGCTTTAAAGCTAAAGACACATATGAAAATACATGCGTCCATTGAATGGAGCAATCCGCAAGAGTTCCGATGTGCTTTGTGTGATAAACATTTTTCAAAATTAAAACAATTACGAGAACACTTGCCTGTACATCAGGATGGCGAAACTGATATTGATTTTGAAAGCTCTCTTTACATGAAAACATTTGTTAAGTTGGAAAATCCTTTAGATCGGGAATCTGTGAAAAAAGTCATAGCAAATGACTACGGTAAAAAGCAACTTACGCGATTTTATTGTGCTTTGGATAAAAATGCTGAAGAACTCGACGTGATGGACTCGGAATGTGAGTCCGAAGAAGATCATCGCCATTCTTACAAGTGTTTACAATGTCATTCGGACTTTAGACGTAGATCATCCTTGGTTGAACATCAAACAACGAATCATGCGGGAATGTCCTTACCCTTTCGTTGTGATGTATGCTCGCGGCAGTTCGCTTGTCAAGAAGTTCTCGATCATCATCAATATCGTAATTGTTTAAACGAATATCGCCAACAAAGTTTTCGGTGCGATATTTGCGCGTTAAATTTTGTTTGGCCCAGAAATTTAGCGAAACATAAACAAATGAAGCATTCCGATCGTGGCGATCAAAACAAATATGGTAATAAATTAAAATGTGATGAGTGCGATAAAGTGTTTATTTGGTTAAAGGATTTAAAACGGCATCGGGTTATACATCGACCAGATGaaaaaaaaTATGCTTGTCCCCATTGCGAAAGGAAATTTTATCGTAAAGATCATTTATTAGCACATATACGCACTCACGATCCCAATAGTGTGCCAATAACATTGAATTTAAATCGAAAAGTAAACAATTTTGATGTGAACCTAAGCAGACCTCATGGTTATAAACAGATCAAATGCATGATTTGTTATTCTCAGCACACAACTATACAGGATTTGCGCAATCATTTGGCAAAACATCAGTATACGATCGATTTTGAAAGGCGCAAGGAAATGGAAGTTGTTGATTTCATTTCTGCACAATTCTATCCCGAAGAAGAGATAATGACGGAGGCGGTGTTAGTGGCGCGAATTGGTATTGATTTAACCAACAAACATAAACTGGAACGTTTTTATTCCATAACAAATGAAAATGGTTACGAGTTAAGTTTGGACAGTTCGGAAACTGACCTCGATTCGGAAGATGATGATGAGAGTGCCAAACTTACTACGAAAGGTCGTTATAACTGCGATATATGCCCCCATTTGAGTTTCGCGCGTAAATACAAACTATTTCAACATCATGAAAATGAACACACTTGGGAGGAGGGGCGTCACGTTTGCAATAGCTGCAATGCTCGGTTTTTGTCGCCCGAAATATTGGAGCATCACTACAAACAACAGTGTAAAAATCCCAATAAACGGCATCAGTGCCGCAAATGTTCATTGCGTTTCATGTGGAAAGATAATCTTAAATCGCACTTTGCTATGATGCATGCCCGCGAAAATGCGAATGAGAATGAAATGAATCGCCGTTATGAGTGCTTCCTGTGTCAGCTCAAATTTGAGCATAAATGCGATCTAAAGCGTCATATGAGTTTGCACGGTGACAGTAAAGATGTGTACTTGCATTACTGTGTATTATGTCCACGTATGTTTTATTTACGGGAAAATCTTTGTGCGCATATTAAGGAACATGGCATAAAAGTCACCGACATTGATTGTATGGAAAGTATTATTGCTTCGACATGCTGGCCTAATGGCGACAAAGTGATTGAATGCAAAATATGTCAAAGGAATTATCCAACCATGGCAAACTTATCTGAGCACTTTCAACAAACGCATGTATCCGCAATTTTGTCTGGTGGTTTAGAAAACTACTCGATAATCAATGAACGTGGATATGAGCTACATTTGGAATGGAATTCTGAGACGGAAGCAGAAGAGGAGTTAACTGGTTGTTTGGCGAAAAATTCATATATTTGTGAAGTTTGCAATTTTCAATGTAAACGAAAGTATAAAATGGCGCAACATCAACGCTCTTTCCATTCATATGAAACACTTACGTTAAAGTGTGAATATTGCATTTTTAAAACAGTCTCGCAGAAAATACTTGACTATCATAAAGCAAGCCAATGTTTGAATAATGAAAAGCAATACACTTGTAGCCAGTGTTCATTTCGTTTCATGTGGCAAGAAAATCTAAATAAACATGTGGAATTACAGCATACTCTTAAAGTAGCTGCGGATGTTAGCAAACAGGAGCAAAGCTCCAGTGCAAAATCATCTTTACTACCTCTTCCTCTGCAGCAGAATTCCCCAAAGGAGATGAAGTTATTTAAATGCCCTGATTGCCATCGTACTTACAACCGTAAAGATCGTTACAACGCACATTTGAAAAAATATCATAATCCAGCTAACGGCCAACCTTTATCGGTGGTAAGGGGCAAGCCTTCTAAAAAGGATGCCAGCAAACAAGTTGCCATCAAAGTGAAGCAAAAGCATTTGTGTGCCTTGTGTGGTTTAGCTTTGTCTTCTGCCTCCTGTTTAGCTATACATATGCGTCGACATACCGGCGAACGTCCCTATAAATGTGATATATGCGAACTAGCTTTCGCTAGGCGCACTGATTTAATTTCACATAGACGCACGCATACTGGCGAAAGACCTTACAAGTGCACGATATGCGCGAAAACCTTTATACGATCTTATAAATTGACTACGCACATGCGCACACATACTGGTGAAAGGCCATACAAATGCACATTCTGTGACAGTGCTTTTGCTCAATCGAATGATTTAGTTATACATCGCCGTCGTCATACCGGCGAAAGGCCTTACTTATGCGATATATGTGGAGAGGGTTTCATACAGGGCAGTGCTCTAAAAGCGCATCGTCGGCAAAAGGGTCATCACGTCAATAATACAGACGTGCATACTTCAAAACATTTACCTGCATTTCCGGTGGAGTTCTAA
Protein Sequence: MPQYLCNNCNEKLKNTNEFIQQLIETHEFYEIQLEEKVLAGCTNDPFLWEDSLPYSEKNLKNGNSNDKGCMVDCLVETVIDIPIDGALKCQQMENDYLQIKKESTTENCHHSDLGCIDDEEPKEGFIRGNQVEKIPSETVNKDFLPPITREDDISTDNLNFLPNFSSGTDDEDDEYIPPKPKIRKSIIDKKVKTRKGRPRSQEFSKIKKINDRFLCYMCDKTFSLRKDVTRHINTIHSDKAHFQCEFCGHQFKRKDKVREHIRAYHQPTHTNTNTSKSIPNGMKSRFNQWKYGDCLYSKPTIRRLIECKLCETRFSNAAELRQHLETHRDSKTLQHLQLRSNIVRQLYPNADTIEKARETIEKEIFLNQWSRFYIILNEHGYEVSISDTENEVDRSDDDEVYEKRYQCELCQLKFSYKYQVFSHMKEQHRETEKEIPYKCKLCKLDFLCSRMFEQHSRTHCRNRDKSFVCIRCPAKFAWIESMRQHNCLHKPRFLTGTKDKNNPLKCSICRTTFKTALKLKTHMKIHASIEWSNPQEFRCALCDKHFSKLKQLREHLPVHQDGETDIDFESSLYMKTFVKLENPLDRESVKKVIANDYGKKQLTRFYCALDKNAEELDVMDSECESEEDHRHSYKCLQCHSDFRRRSSLVEHQTTNHAGMSLPFRCDVCSRQFACQEVLDHHQYRNCLNEYRQQSFRCDICALNFVWPRNLAKHKQMKHSDRGDQNKYGNKLKCDECDKVFIWLKDLKRHRVIHRPDEKKYACPHCERKFYRKDHLLAHIRTHDPNSVPITLNLNRKVNNFDVNLSRPHGYKQIKCMICYSQHTTIQDLRNHLAKHQYTIDFERRKEMEVVDFISAQFYPEEEIMTEAVLVARIGIDLTNKHKLERFYSITNENGYELSLDSSETDLDSEDDDESAKLTTKGRYNCDICPHLSFARKYKLFQHHENEHTWEEGRHVCNSCNARFLSPEILEHHYKQQCKNPNKRHQCRKCSLRFMWKDNLKSHFAMMHARENANENEMNRRYECFLCQLKFEHKCDLKRHMSLHGDSKDVYLHYCVLCPRMFYLRENLCAHIKEHGIKVTDIDCMESIIASTCWPNGDKVIECKICQRNYPTMANLSEHFQQTHVSAILSGGLENYSIINERGYELHLEWNSETEAEEELTGCLAKNSYICEVCNFQCKRKYKMAQHQRSFHSYETLTLKCEYCIFKTVSQKILDYHKASQCLNNEKQYTCSQCSFRFMWQENLNKHVELQHTLKVAADVSKQEQSSSAKSSLLPLPLQQNSPKEMKLFKCPDCHRTYNRKDRYNAHLKKYHNPANGQPLSVVRGKPSKKDASKQVAIKVKQKHLCALCGLALSSASCLAIHMRRHTGERPYKCDICELAFARRTDLISHRRTHTGERPYKCTICAKTFIRSYKLTTHMRTHTGERPYKCTFCDSAFAQSNDLVIHRRRHTGERPYLCDICGEGFIQGSALKAHRRQKGHHVNNTDVHTSKHLPAFPVEF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00747635;
90% Identity: iTF_00748394;
80% Identity: -