Gspa027601.1
Basic Information
- Insect
- Globia sparganii
- Gene Symbol
- clz9_21
- Assembly
- GCA_949316385.1
- Location
- OX438673.1:16370591-16372459[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.5e-07 0.00018 22.2 0.0 4 39 18 52 15 56 0.86
Sequence Information
- Coding Sequence
- ATGCCAAGGAACTGGACAAGAAAGACCTCTAAAGCCAGTTGGACTACAGGTGACCTGCAGACAGCTGCTGTACGCATTAGACAAGGCGTTTCAATACGCAAAGTTGCCGAGGAAACTGGTATTCCTTTCAGCACATTACAAAGAAGGATAAAGAAAGATGAATTCAAACCTCCAAAATTAGGAAGAAATGCCGTTTTTAATGAAGAGCAAGAAAATATACTTACAGAGCGTATTTTACGATTGAGTAATATGTTTCATGGTTTGACGACAAATCAACTAAGAAAAATAACATTTCAATGTGCTGAAAATTTAAAGCTAtctcataattttaacaaaGATACTAGAATGGCTGGCAGGGACTGGATCCAAGGATTTCTTAAGAGAAATCCACGGATAAGCATTCGAAAACCTGAAGCAATAAGTATACAGAGAATTACAGGTTTTAATAAAACCGAAGTGAACACATTTTTTAAGAACTTGGAAGAAGTTATGACCAAAACTTCGTTCTCACCTCAAGATATTTATAACATTGACGAGACAGGTATTACCACCGTCCAGGAAACCGAAAAAATTCTGGCTACAAAAGGTCAAAAAAGAGTGGGTTCTTTGACTTCTTGGGAGAGAGGTAAAACGATTACCGTCATTTGTTGTATGAGTGCTGTTGGATCTTTTATTCCTCCTATGTTTATTTACCCACGCAAAAGACATTCACCACAACTCGAGAAGGATGGACCATTAGGTGCAGCTTATGAAAACTCTAATAATGGCTGGACGAATGAAGAACTGTTCATAAAATGGTTACAACATTTCGTGCAAACCGCTAAACCGAGTGAGGAGAAAccagttttattaatattggacAACCATTACAGTCATTCTACCCTCGAATCATACAATTTCTGCAGAGAACATTTCATTACTGTAGTGTCCATTCCTCCTCACACATCACACATGCTTCAGCCTCTTGACGTGGTTTTCTATGGTCCTCTTAAGAAAGCTTACAACAGAGAGTGTGATTTATACATTAAAtcacataatttacaaaaaatcacgCCATACGAAGTCGCTGGGCTTTTTAACAAAGCCTTTATGAGAGTTGCTTCTGTGGAGAAAGGAGTCAGTGGCTTCGCATCAACAGGAATATTCCCACTCAATCCTCACAAGTTCAAAGACGAAGATTTCTTAGACGCCTCTGATGTTCCCTGTGTTGAAGAAATTGCTGCCACCATAACAGACGTGAGAGTTAATGAAGTTTTAGATAATTTTTCAACTAACAACATTTCAGAAGCAACAGCATCAACTAGCAGTAGGAACGTTTTGGAACCGCAACCTTCCACAAGTGataatattacaaataataaaccAAATCAAGAGAACAATAAATTCGACGGTGAACCTTTAACTAGCGTACTTTCACAACTAACTCCTCTGCCTTGCATTGGAAAAGGTAAAGGCAAAggaaaaagaacacaaaaatcAGAAATTCTTACTGCCACACCTCTGaaaacggttttagaagaaaaaGCTAAGAAACGAAAGGAAAAAGAAAAGCATACAAGAGGCAAAGTTATTAAGAAGATAAAAGAAGTAAAAAAGAACTTATTTAAGTCAAgttcatctgaagaatcggctGATGAACAGGTTCCTTATGATGAGAGTGGTGACAGTGACTTAGAAAATATTGAAATCCCACTAAACATCCAGCAAAACTCCCAGAAAGAGCGTGACCAGTCTGTGTGCACGATATGCCTCGAAGAGGGAAAACCGAGAGAAATCTGGTACCGTTGCCGTCTCTGTGCTGGATGGGCCCATGAGGCATGTACAGGATGTGATGATCCAAGTCGCTATCGCTGtgatttttgcatttaa
- Protein Sequence
- MPRNWTRKTSKASWTTGDLQTAAVRIRQGVSIRKVAEETGIPFSTLQRRIKKDEFKPPKLGRNAVFNEEQENILTERILRLSNMFHGLTTNQLRKITFQCAENLKLSHNFNKDTRMAGRDWIQGFLKRNPRISIRKPEAISIQRITGFNKTEVNTFFKNLEEVMTKTSFSPQDIYNIDETGITTVQETEKILATKGQKRVGSLTSWERGKTITVICCMSAVGSFIPPMFIYPRKRHSPQLEKDGPLGAAYENSNNGWTNEELFIKWLQHFVQTAKPSEEKPVLLILDNHYSHSTLESYNFCREHFITVVSIPPHTSHMLQPLDVVFYGPLKKAYNRECDLYIKSHNLQKITPYEVAGLFNKAFMRVASVEKGVSGFASTGIFPLNPHKFKDEDFLDASDVPCVEEIAATITDVRVNEVLDNFSTNNISEATASTSSRNVLEPQPSTSDNITNNKPNQENNKFDGEPLTSVLSQLTPLPCIGKGKGKGKRTQKSEILTATPLKTVLEEKAKKRKEKEKHTRGKVIKKIKEVKKNLFKSSSSEESADEQVPYDESGDSDLENIEIPLNIQQNSQKERDQSVCTICLEEGKPREIWYRCRLCAGWAHEACTGCDDPSRYRCDFCI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00185259; iTF_00185258; iTF_00973719; iTF_00186112; iTF_00186118; iTF_00783399; iTF_00783398; iTF_00237484; iTF_00446059; iTF_00237485; iTF_00123313; iTF_00120447; iTF_01027247;
- 90% Identity
- iTF_00973719; iTF_01027247; iTF_00446059; iTF_00237484; iTF_00237485; iTF_00123313; iTF_00120447;
- 80% Identity
- -