Gale022924.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Glaucopsyche alexis
Gene Symbol
-
Assembly
GCA_905404095.1
Location
FR990053.1:23181649-23191486[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 23 0.021 2.3 9.9 0.6 3 23 744 765 743 765 0.90
2 23 0.069 7.6 8.3 0.3 1 21 1139 1159 1139 1160 0.96
3 23 8 8.7e+02 1.9 0.3 1 22 1202 1223 1202 1225 0.82
4 23 0.067 7.3 8.4 0.8 3 21 1236 1254 1234 1255 0.94
5 23 0.52 56 5.6 0.0 3 23 1264 1285 1262 1285 0.89
6 23 0.14 15 7.4 0.1 3 23 1305 1326 1303 1326 0.96
7 23 0.0053 0.58 11.9 3.0 1 23 1332 1355 1332 1355 0.95
8 23 0.15 16 7.3 0.0 1 23 1380 1403 1380 1403 0.90
9 23 0.022 2.4 9.9 3.4 1 23 1408 1430 1408 1430 0.97
10 23 0.014 1.6 10.5 0.2 1 23 1436 1459 1436 1459 0.95
11 23 0.00054 0.059 15.0 0.8 1 23 1473 1495 1473 1495 0.98
12 23 0.00021 0.023 16.3 1.8 1 23 1542 1565 1542 1565 0.97
13 23 0.0027 0.3 12.8 1.0 1 23 1636 1659 1636 1659 0.95
14 23 0.0024 0.26 12.9 1.5 2 23 1686 1708 1685 1708 0.95
15 23 0.11 12 7.7 0.2 2 23 1714 1736 1713 1736 0.93
16 23 0.007 0.77 11.5 0.3 1 21 1777 1797 1777 1798 0.95
17 23 0.0022 0.25 13.0 0.2 1 23 1808 1830 1808 1830 0.93
18 23 0.0001 0.011 17.2 0.3 2 23 1924 1946 1924 1946 0.93
19 23 7.7e-07 8.5e-05 23.9 1.0 3 23 1953 1973 1952 1973 0.98
20 23 0.014 1.5 10.6 0.2 1 23 1990 2012 1990 2012 0.97
21 23 0.23 25 6.7 0.0 1 23 2033 2055 2033 2055 0.97
22 23 0.013 1.4 10.6 0.5 1 23 2061 2084 2061 2084 0.95
23 23 0.00037 0.041 15.5 0.7 1 23 2092 2115 2092 2115 0.96

Sequence Information

Coding Sequence
ATGAGTGTGGATTATGATAGTGTTTGTAGACTGTGCTTAGCATCTGAACGCGATTTAGTGCCGATATTTCCTACCACCAGTTCGGATGACTCGGAACCTCTCGTCCTCGCTTTGAAAATCAAAGATTGCGTGTCCATACAGATTGAGGAGAATGACAATCTACCAAGTAATATTTGCAAGAAATGCAATGACAATGTTATCAATTGGGAGATATTCAAGGGAGTTTGTGAAAGAACACAAAATAAACTATTAGATTTAAACAAAAAGGGCAGCAGCCAACTGGAAGAGTTGAATGTGAAAAGGGAGCCATATTCAGATGAAGCCTATGACGATGGAGTGGTAATAGACGGCTCATACCCCGAGAGTGAGAGTGCGGAGGGACCGAATAAACTACAACCCGAGGGTCCACCTATTTTGACTTCCTTGGGACTGACGCCGAGGAGTGATAAGAAATATGTAGATCCCAGAATGGACTGGCAACGTGTCCATGCGATATTGGACATTGTTCAAGAAGATGAGGTCATTGACTCTTTACAAGTGAGAGAGGAGTGTGACATTGTCCATCAATCGGAACATGACTCCGATACAGATATAGAACTCAACGAGGGCATAAAGCAGGAGTATTTAGAATTCAAAAGAGGATATGTGTGCAGAAATAAGAAGACATTGTCAAAGAATCCCAAGCTGTTATCCTCGCACAATATAGCTAAAGCTAGAAAAGTTGTCAGTTTGAGGAAGAAACAAACTGTACTGCCACACAAATATTATGCTCGGCCTCGGAATTCGTGGCAGCTATTCATTTCAGATGACCTTTTGGAGCTAATTGTGGCTGCGACTAATGCAAAAATGGAAATGAGTGAGGCGAGGTACTTTCCAACAAAGATCCGCGAAATAAAAACTCTTATAGGTATATTGTACTATCATGGTATAACCAGAGCAACGCACCAAAAATGTAACGACCTTTGGAGTCACGAGTTTGGTGCTCCATGTGTGCAAGCGGCCATGAAGTATGAGCGGTTTAAGACTCTGCTCCAAAACCTGAGctttgaaaataatgaaaacgaATCTATCATGGAATTAGATGTAATGAAACAAATTCGTcaagtatttgaaatatttgcgttaaATTGTAGAACTTCATTTGCAGTTGGTAACACTGTTGTGATTGACGAAGTTATGGTGCCGGTTTATGGACCTTGCCCGTTCCGATACCAGATCAAAAAGAAAGAGTTGAACTCTGGTATCAAAATGGTGTTAGTCGTGGATCCCTATAACTTTTATGTATCCAACTTGGATGTGATAACAGATCCTTATTTTGGCAGTGACGACATTGCTATGAAGCTGTTGCAGCATTTAGCTGGTACTTACAAGACTGTTGTAATGGACAGTTGGTTTTCATCACCTACTTTAGTGAATAAATTACTGAATGAATACAAACTATTCTCACTAGCTGCTATAAATGAAAGAAATGAGATACTGCCTCCTCTATTTGTATCTCATCAcagaaaaaatagggttcttcTAAATGGATTCTTAGATGAAGATGTACTTCTAATGTCCCTTATTGATTCAAATCAGAAGACTGTCAATATATTAACTAATGAACCAAAACACTATAAAAAAAGTAATGTCAATTCCATAACTCCTATTTCATTGTACAAGAAACACCAATCAGCCGTTGAAGTTATCGATGTACTTATGCATTATTATACAACAATGCAACATACAAATGACTGGACTCTGTCCATATTTTTCATGCTACTCAACATTGCTTCGGTGAACGCTCAAGTTATGTGGACTTCACAATCACCGAATACGAGCATGAAACGTCGCTTCTTCATAAGAGAATTAGCGCTGAGTCTGATGGATGCACAATATGAGCCTGTCCTCACGGAAATAAATCTTAGTTCCAAGAAGAGGAAGATGAGTATGGAGCATTTGTCCCCGTCGTATAAGAACAGAAGACGTTGCAAGCCCTGCCATGCATTGTTCAAACGAGACAGACGAACGAAGACTTATTGTGTCAAATGCGTGGATAGCGATAAGGATTACGAGGAAGGCGACGACCAGGAGGAGCCTGCTGATGATGACGAGGAGGAGGAGATGAAGGAGCAGAAAGTGTTCTCCGACATACCCAACATGCCTGAAGTATCCATAACCGTCATGCGACGCACGGGAGAGGAGACGCTGCACGGTAGACAGGGCATCCAACAACTAGCCTCCAAGGACTGCCTTGTCTGCGGTCGAAGCTACAGGTACTCGCATAACGCCCGGCGACACGAACTAGGCGCGCATAACTTCGACAGATACACAAATAACCACATGGCAAAGAAATCAATCATGCAACCGAAGTTACGACCTAACCCCTTTAACCCCAAGGCGAGGCTCATGCCTAATCCCATCAGCCATAAAATGCAGTACATGAACATGGCTAAGCCGCTGCAGAAGAAAATCATGCCCCAAAAAATGATCGCCTGCCCGAAACCGATTCCAATAAAGAATGTCAAATCGAACCAAACGAATCTGCCATACCCATTGCGAATTAAAGCTCTTAAGGATTTGCAAATAAAGAAAAAGGAACCTCAAATACTAAAGACTCTTTTGACGTCGAAGCCCGAAGTTTTGGTTTCTGAACCGGAAATAATGAATTCCGGTCCGGAGAGTCCAGAGACCTTAATATCGGAACCGGAGATTGCGTCGTTTGCGGTCGAGACTATACTGTCCGAACCGGACGGAGACGCCAACCAACAGGATGAGGAATATGACGGCgaggaacaaaacaaaagagGCCATAATTATGATACAGTAGACATGGATTCTGAAAACGAAATAGAAATAGCGCGACAACAGGCTGATGTGAATTACGACCAAGAACAGGAACAAAAAGAAGATGATCCTAAGGAAGATTTGAATGAAAATGATGATTCTGACAAAAATAGCGCAGGCGACAACGCAACGAGTGAGAATAAACATGAGGCAGAAATTGAGGACAATGGTGAGAAACCGAACGAAGACTTGACAgaaaataaagataaagatgaccaagacgctaACGATGACGACGAAGACGATGAAGAAATGCCTCCCATAGCACCTGTCGTAGAAATCAACGAAGAAATGAACAACTCTTACCACAATGATGAGACAAACGATCACCACAATAATGAGACAAACGAAGATGACTACCTCGATGACACTGTAGACCCTAATGACGCGGCAGACCTCGATAGTACTCCAAAAATACTCGACCCCGATAAGACCTACGTAACAAAGACACAAAGAGATTTTATAGTCAAATATCGTGATATAATTCAACAGATAAATACTATGACTTGTATCTGCTGCAACAGAGAGCATCCCCGAAGAAAAGCGGTCATCCAGCATTTACAAAAGAACGGCCATAAAGTACCCAAGCACACATGCTACAACTGCGTCGTAACGTTCAGTCATATTGGTGCTCTGCTAAGTCACATGCGAGCCAACTGCTGTACTGATTTGTGGAAAATAATATACAACGAAAACGGAATAACCGAGGACTTGGTCCTAGAGGATGAGCCGAAAGACAATAAAATCGCGTACAAGGACATATTCAACGCGAGGTCGTATGCTTGCAAACTGTGTCCGGCAAAATTCCAACTGAAGCAATTTATTATGAAACATGTCCTCGATGTCCACGAGGACGGCCAGTCGAGAGTACATTTGGCGTGCGTACACTGCAGGTCGAGGTTCAAGGACAAGGCGCTGTGGAAGAAACACATTCGGAACGGCGAATGTACGGTTTGTATAGCGTGCGATTTGTGCACGGAGACGTTTATAACCATGCAGGAGTTCAACGATCACGCGCTGGCCGTGCATGCGGGCCACTTCGACCCCGACAACCAGAACAAATGCGTCGACGGCCGCCCCACCGACTGTCCCCTGTGCGGGAAAAAGAACAGCGGCTATCCCAATCTGGTGAAGCACTTGAAAATCATACACAACGAGGAGCAGCCGCACTACTGCCAACACTGCGACTCCAAGTTCAAGGAGGCGGGAGATCTTAACAAGCATATTTACATGGAGCACTCCGACCGCTCTATGGTACAGAACAACGAGCCCGATATGTCTGTGGTCAAGGAGGAGGCGGAGGAGTACCACTACTCCTGTACGGAGTGCAACGCGATATTCGAGACCGTGGATGCCTGGACCGACCATCAAGTCGCTGAGCATAATCAGATCGCGCACCACTGCGACCAGTGCGAAAAGAAGTTCCTCCGGCCGTCCGAGTTGGCCGAGCACAAGAACACGCACCTGCGGGTTAAGTTCTACCCGTGCACGATTTGCGCCAACTCCTACAGCACGGCGTCCAAGCTGTCCGAGCACGTGCAGCAGAGCCACCCCGGCAACAATCACTCACCCGCCGGTGGGGAGAACATGTTCTACTGCGAAGTGTGCGTGAGGGGTTTCAAGAGTCGCCAGGCCTACTCCAATCACATGCGCATACACTCCAAGCATCCTCAGGGCAATAGAAAGGCAGATCAAAAGAGTTTCGCCCCCCAGATAATCGGAAAGCCGATCCTCCAGTATCCGCTGATGCAGCAGAGTTTCGGCTTCAAGTCAAACCTCAACGTTCCCAACGCGCCCTACTCGTGCGACATCTGCGGCAAGGGTTTCATGCACAAGAAGAATATCTGGAAGCACAAGAAGGTGCTGCACGCCGATATCGTCAACGACCGCAACGACAGCGAGGAGAACACCATGCACGCGTCCACGGAGGAGGACGAGTACAACGTAGACGAGAACGGCGCTGCGCTGTCCACGCCGCAGTTCAATAGCTTCAACTTCACCAGCATGTCCGCTGCCGCCCCCGCACCGCAAGCCGCCCCGGCGCCGCCGCGGTCCAAGACGCCCCAGGAGGCCATGCAGTTCGCGTGCGACCTGTGCTCCAAGAGATTCCCCCTAAAAACTAGCCTATGGAAGCACAAGCGCGCGAAGCACGGTATCATCAACGCCGCGACTATCGGCACGGCCGACATCCAGCCCTCCGGCAGCGAGAGCGGCGCCGGCGGCCGGTCCAGCTGCACCATCTGCAAGATAACGTTCGCCGATAAAAAGTCGTACTACCGACACAGGAAAAACGTTCACAAGTCCACCGTGCAAATGTGCAAACTGTGCGGGAAAACTCTCAACTCCACGCTCGAGCTGTACGAGCACCTCAAAGCCGCCCATTCCCGGGAGCTGCTGGGCCACACCGCCACTCAGTCGACGAGCAGGCACCAGGAGTACGCCCCAGAGGAGGGGGACTATGATCCCAGCGAGCGAGCGGATCCCAGTGAGTACCAGGCGCAATACACCTGCGACACGTGCGGGAAGCAGTTCGTCGGCCTGCTCGCCCTGCAGAACCACCAGTGCATTAACCAGATGCAGGCCCAGCCGCAGACGTTCGACTGCGAGATCTGCCAGAAGAGCTACACCTCCATCGCGGCGCTGAAGAGCCACCGCGGCTGGCACCTGCGCTCGCCGGACGGCAAGGCCGCCGCGAACAACTCCGGCCTCTGGATGCCACAATCGAAGGTCACCAGCAAGGTCAGCAAGTTCGAGGTGCTGGACGCGGCGCAGTTCGCCAAGGTGTCGATGCCGGCGCAGTCGACCTCGGCCGCGCTCGCCAAGCGACGGCTGCCGCCCGAGGTCGAGGTCACGGTCGTCAACCCGAACAAGAAGATGCGCTCGGACGACTCGCTCGAGCTGGACCAGCAGAACAGCGCGTCGGTGACCAGCGCCGAGGACCGCTACTGCAACATTTGCGACAAGGAGTTCACGAAGCGCGCTGCGTATCAGCGACACATGGACGAGGTGCACCAGCCCAACTCCGTGTTCTGCCCAGTCTGCGACAAGAGCTTCACGAGGAAGTCCACACTCATAGTCCACTTGAAGAAGCACTACGAGGTGGAGGAGGGGGGCGGCTCCAACGCCCCGGACGACGTCGTCCACACGTGCAACGTTTGCGAGATCCAATTCGACAACGAGGCGGACTTTGCGGCGCATCGGGAGATGCACGAGGACGAGTCGGCGGAGTCCGAGGACGACGGCTCGGCCCACGTGCAGCTACCGGGCGAGTTCACGTGCGCGCAGTGCGGGGACGGCGTGGCCACCCCCCGGGACCTGATCGCCCACCGCGCCATGCATTCGACGCCTACCAAGTTCTTCTGCAACATCTGTAAAGTGTACTTCGCGCGGGCTATAGACCTGTCCACGCACACGCGCGCCCGACACGCCGAAAACGAAAAGGCTTTCTTCCCCTGCGCCATGTGCGACCGCTTCTACATGAACAAGAAGAGTTTGCAGAGGCACATCGAAATGTCCCACTGA
Protein Sequence
MSVDYDSVCRLCLASERDLVPIFPTTSSDDSEPLVLALKIKDCVSIQIEENDNLPSNICKKCNDNVINWEIFKGVCERTQNKLLDLNKKGSSQLEELNVKREPYSDEAYDDGVVIDGSYPESESAEGPNKLQPEGPPILTSLGLTPRSDKKYVDPRMDWQRVHAILDIVQEDEVIDSLQVREECDIVHQSEHDSDTDIELNEGIKQEYLEFKRGYVCRNKKTLSKNPKLLSSHNIAKARKVVSLRKKQTVLPHKYYARPRNSWQLFISDDLLELIVAATNAKMEMSEARYFPTKIREIKTLIGILYYHGITRATHQKCNDLWSHEFGAPCVQAAMKYERFKTLLQNLSFENNENESIMELDVMKQIRQVFEIFALNCRTSFAVGNTVVIDEVMVPVYGPCPFRYQIKKKELNSGIKMVLVVDPYNFYVSNLDVITDPYFGSDDIAMKLLQHLAGTYKTVVMDSWFSSPTLVNKLLNEYKLFSLAAINERNEILPPLFVSHHRKNRVLLNGFLDEDVLLMSLIDSNQKTVNILTNEPKHYKKSNVNSITPISLYKKHQSAVEVIDVLMHYYTTMQHTNDWTLSIFFMLLNIASVNAQVMWTSQSPNTSMKRRFFIRELALSLMDAQYEPVLTEINLSSKKRKMSMEHLSPSYKNRRRCKPCHALFKRDRRTKTYCVKCVDSDKDYEEGDDQEEPADDDEEEEMKEQKVFSDIPNMPEVSITVMRRTGEETLHGRQGIQQLASKDCLVCGRSYRYSHNARRHELGAHNFDRYTNNHMAKKSIMQPKLRPNPFNPKARLMPNPISHKMQYMNMAKPLQKKIMPQKMIACPKPIPIKNVKSNQTNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEIMNSGPESPETLISEPEIASFAVETILSEPDGDANQQDEEYDGEEQNKRGHNYDTVDMDSENEIEIARQQADVNYDQEQEQKEDDPKEDLNENDDSDKNSAGDNATSENKHEAEIEDNGEKPNEDLTENKDKDDQDANDDDEDDEEMPPIAPVVEINEEMNNSYHNDETNDHHNNETNEDDYLDDTVDPNDAADLDSTPKILDPDKTYVTKTQRDFIVKYRDIIQQINTMTCICCNREHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFSHIGALLSHMRANCCTDLWKIIYNENGITEDLVLEDEPKDNKIAYKDIFNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSRVHLACVHCRSRFKDKALWKKHIRNGECTVCIACDLCTETFITMQEFNDHALAVHAGHFDPDNQNKCVDGRPTDCPLCGKKNSGYPNLVKHLKIIHNEEQPHYCQHCDSKFKEAGDLNKHIYMEHSDRSMVQNNEPDMSVVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQIAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCTICANSYSTASKLSEHVQQSHPGNNHSPAGGENMFYCEVCVRGFKSRQAYSNHMRIHSKHPQGNRKADQKSFAPQIIGKPILQYPLMQQSFGFKSNLNVPNAPYSCDICGKGFMHKKNIWKHKKVLHADIVNDRNDSEENTMHASTEEDEYNVDENGAALSTPQFNSFNFTSMSAAAPAPQAAPAPPRSKTPQEAMQFACDLCSKRFPLKTSLWKHKRAKHGIINAATIGTADIQPSGSESGAGGRSSCTICKITFADKKSYYRHRKNVHKSTVQMCKLCGKTLNSTLELYEHLKAAHSRELLGHTATQSTSRHQEYAPEEGDYDPSERADPSEYQAQYTCDTCGKQFVGLLALQNHQCINQMQAQPQTFDCEICQKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQSKVTSKVSKFEVLDAAQFAKVSMPAQSTSAALAKRRLPPEVEVTVVNPNKKMRSDDSLELDQQNSASVTSAEDRYCNICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLIVHLKKHYEVEEGGGSNAPDDVVHTCNVCEIQFDNEADFAAHREMHEDESAESEDDGSAHVQLPGEFTCAQCGDGVATPRDLIAHRAMHSTPTKFFCNICKVYFARAIDLSTHTRARHAENEKAFFPCAMCDRFYMNKKSLQRHIEMSH*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00406079;
90% Identity
-
80% Identity
-