Basic Information

Insect: Glaucopsyche alexis
Gene Symbol: -
Assembly: GCA_905404095.1
Location: FR990044.1:17605657-17625353[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.33 3.9e+02 2.3 0.2 31 44 5 18 1 18 0.84

2 13 8.5e-10 9.8e-07 29.8 0.4 3 44 40 80 38 80 0.94

3 13 5.6 6.5e+03 -1.6 0.4 15 23 100 108 89 114 0.80

4 13 1.7e-07 0.0002 22.4 0.8 5 44 173 207 171 207 0.94

5 13 8.9e-08 0.0001 23.4 0.6 5 44 239 273 235 273 0.93

6 13 1.8e-12 2.1e-09 38.4 0.5 3 44 304 344 302 344 0.94

7 13 0.32 3.7e+02 2.4 0.1 18 43 364 393 353 394 0.86

8 13 1.7e-08 2e-05 25.7 1.8 6 44 428 461 425 461 0.95

9 13 4.4e-11 5.1e-08 33.9 0.9 3 43 488 527 486 528 0.94

10 13 1.8e-10 2.1e-07 32.0 1.1 3 43 541 580 539 581 0.95

11 13 4.4e-07 0.00051 21.1 2.5 6 44 596 629 593 629 0.94

12 13 3.8e-10 4.4e-07 31.0 2.6 3 43 660 699 658 700 0.95

13 13 0.26 3e+02 2.7 0.5 14 43 716 749 706 750 0.82

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.33	3.9e+02	2.3	0.2	31	44	5	18	1	18	0.84
2	13	8.5e-10	9.8e-07	29.8	0.4	3	44	40	80	38	80	0.94
3	13	5.6	6.5e+03	-1.6	0.4	15	23	100	108	89	114	0.80
4	13	1.7e-07	0.0002	22.4	0.8	5	44	173	207	171	207	0.94
5	13	8.9e-08	0.0001	23.4	0.6	5	44	239	273	235	273	0.93
6	13	1.8e-12	2.1e-09	38.4	0.5	3	44	304	344	302	344	0.94
7	13	0.32	3.7e+02	2.4	0.1	18	43	364	393	353	394	0.86
8	13	1.7e-08	2e-05	25.7	1.8	6	44	428	461	425	461	0.95
9	13	4.4e-11	5.1e-08	33.9	0.9	3	43	488	527	486	528	0.94
10	13	1.8e-10	2.1e-07	32.0	1.1	3	43	541	580	539	581	0.95
11	13	4.4e-07	0.00051	21.1	2.5	6	44	596	629	593	629	0.94
12	13	3.8e-10	4.4e-07	31.0	2.6	3	43	660	699	658	700	0.95
13	13	0.26	3e+02	2.7	0.5	14	43	716	749	706	750	0.82

Sequence Information

Coding Sequence: ATGTCCATCAAGTCTAGTGATAAAATGAGAGGTCATATTAAGAGGAATCATCCCGTTTTTTACACCAGCAAGATGGATGAAAAAAGTCCACAAAAACGTAGGTCACGTCGGAGTTGGTTGTGGACGTACTATGTGCCCTTCTCGGACAATCGCGCGACTTGCAAGTTCTGCGACAAGTCTATGTCTTACGCCGGAGGCTCTACTGGGAACCTCGTCAAGCATCTTAGAAAAATTCATAACACGGACAAGAGCGAAGgTTGGATTTGGTTAGTGTTTGAAGAGGAAGATGATAATAACGATAaatatttgtgcaaaatatgtcACTTCAAATGTCCTAAGACTGAAGACTTGAAGAACGATCTTCAGATAATATGTGACCATTTGAAAAAAGAACACGGCTTGAAGTCGGGTGATCAAGTCTCAACTGTTCCTGGCGATGACAGTTTAGTGATTGAAGTACCTGATAAAGATGAAAGCGAACAAGAAAGTAAACGTGGAAATCGACGCTGGGTTCGGGAATACTTTGAAAAGTTAACAGATACAACATTCCGTTGTGACCTGTGCAAGATTTCCATTAAGTATAGTAGTAACATGTTACGTCATATTCAGAGGAATCATTCCGATCTTTACAACAGTAAAGCGGGTACAAAAGtcataaaaaaagaaaagaagagTCCTCGACGGGGTAAACGTGGAAATCGAAGCTGGGTTCGGGAATACTTTGAAAAGTTAACAGATACAACATTCCGTTGTGCACTGTGCGAGATCTCCATTAAGTATAGTAGTAACATGTTACGTCATATTCAGAGGAATCATTCTGATCTTTACAACAGTAAAGCGGATACAAAAGTCATAAAAAAAGAAGAGGAAAGATCTCGACGGAAACGTGGTAGGCCGCGACGGAGTTGGGTGTGGGCGTACTTTGTGCGCATCTCGGACAGTCGCGCAACTTGCAAGCTCTGCGACAAATCTATTAGCCACGGCGGCGGCACCACTGGCAACTTTATTGCCCATCTTAAGAAAGTTCATAACAAGAGCGAAGGTTGGATTTGGTTAGTGTTCGAAGAAgaagatgataatgatgaatatTCATGCAGAATATGTAGCTTCAAATGCACTAAGACTGACGACTTGAAGAATGATCTTCAGACAATACGTGATCATTTGAAAACAGAACACGGCTTGGAGTCGGGTGATCAAGTCTCTACTGTTCCTAGCGATGGAAATAAAGATGAAAGCGAAGATGAAAGTAAACGTGGAAACCGACGCTGGCTCCGGGAATACTTTGAGAAGTTAACAGAGACAACGTTCCGCTGTAACCTGTGCAAGGCATCCATAAAATATAGTAATAACTTGTTGCAACATATTAAGAGGAAACATTCAGATCTTTACAACAGTAAAGTGGATACAAAAGTCATGAAAGAAGAACACGAAAGACCGCCACGGCAACATCGGAGTTGGGTGTGGGCGTACTTTGAGCGCACCTCGGACAGTCGCGCGACTTGCAAGCTCTGCGACAAGTCTACTAGCCTAGGCCGCGGAACTACTGGCAACCTCATCGTCCATCTTAGGAAAATTCATCACAAGAGCGAAGaAATTGGCAGGCCACGTCGGAGTTGGGTGTGGGCGTACTTTGTGCGCATCTCGGATAGTCGCGCAACTTGCAAGCTCTGCGACAAGTCTATAGGGCACGGCCGCGGCACCACTGGCAACCTCATCGTCCATCTTAAGAAAGTTCATCACAAGAGCGAagGTAAACGTGGAAACCGCCAATGGCTTCGGGAGTACTTTGAAAAGTTAACAGAGAAAACGTTCCTCTGTAACATGTGCAAGATGACGATAAAGTACAGTAATAACATGTTGCAACATATTAGGAGGAAACATTCAGATCTTTACAACAGTAAAGTGGATACAAAAGACataaaagaagaaaataaacGACCACCACGGAAACGCGGCAGGCCACGACGGAGTTGGGTGTGGTCATACTTTGTGCGCACCTCCGAAAATCGCGCGACTTGCAAGCTCTGTGACAAGTCTATGGGCCACGGCTTCGGCACCACTGGCAACCTCATTAACCATCTTAAGAAAATTCACCACAAGAGCGAAGGTTGGGTTTGGTTAGTGTTTGAAGAGGAAGATGAGAACGACAAATATTCGTGCAGAATATGTAGCTTCAAATGCACTAAGACTGACGACTTGAAGAATGATCTTCAGACAATATGTAATCATTTGAAAACAGAACACGGCTTGGAGTCGGGTGATCAAGTCTCTACTGTTCCTGAAGATGGAAGTTTAGAGactgaaaaacaaaataaagttgAAAGCGAAGAAGAAAGTGAATGA
Protein Sequence: MSIKSSDKMRGHIKRNHPVFYTSKMDEKSPQKRRSRRSWLWTYYVPFSDNRATCKFCDKSMSYAGGSTGNLVKHLRKIHNTDKSEGWIWLVFEEEDDNNDKYLCKICHFKCPKTEDLKNDLQIICDHLKKEHGLKSGDQVSTVPGDDSLVIEVPDKDESEQESKRGNRRWVREYFEKLTDTTFRCDLCKISIKYSSNMLRHIQRNHSDLYNSKAGTKVIKKEKKSPRRGKRGNRSWVREYFEKLTDTTFRCALCEISIKYSSNMLRHIQRNHSDLYNSKADTKVIKKEEERSRRKRGRPRRSWVWAYFVRISDSRATCKLCDKSISHGGGTTGNFIAHLKKVHNKSEGWIWLVFEEEDDNDEYSCRICSFKCTKTDDLKNDLQTIRDHLKTEHGLESGDQVSTVPSDGNKDESEDESKRGNRRWLREYFEKLTETTFRCNLCKASIKYSNNLLQHIKRKHSDLYNSKVDTKVMKEEHERPPRQHRSWVWAYFERTSDSRATCKLCDKSTSLGRGTTGNLIVHLRKIHHKSEEIGRPRRSWVWAYFVRISDSRATCKLCDKSIGHGRGTTGNLIVHLKKVHHKSEGKRGNRQWLREYFEKLTEKTFLCNMCKMTIKYSNNMLQHIRRKHSDLYNSKVDTKDIKEENKRPPRKRGRPRRSWVWSYFVRTSENRATCKLCDKSMGHGFGTTGNLINHLKKIHHKSEGWVWLVFEEEDENDKYSCRICSFKCTKTDDLKNDLQTICNHLKTEHGLESGDQVSTVPEDGSLETEKQNKVESEEESE*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00745291;
90% Identity: iTF_00745291;
80% Identity: iTF_00745291;