Basic Information

Insect: Gerris lacustris
Gene Symbol: -
Assembly: GCA_951217055.1
Location: OX578277.1:94619868-94631527[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.021 3.5 9.8 5.7 2 22 535 555 534 558 0.89

2 15 2.5 4.1e+02 3.3 0.2 2 19 641 658 640 660 0.93

3 15 0.056 9.2 8.5 0.1 1 23 698 722 698 722 0.98

4 15 0.009 1.5 11.0 0.7 1 22 760 781 760 781 0.96

5 15 0.42 70 5.8 0.3 2 23 796 818 795 818 0.94

6 15 0.0015 0.25 13.4 2.7 1 23 837 860 837 860 0.91

7 15 0.00048 0.08 15.0 4.9 3 23 867 888 865 888 0.96

8 15 0.00055 0.091 14.8 3.1 1 23 926 948 926 948 0.95

9 15 4e-05 0.0067 18.4 3.5 2 23 976 998 975 998 0.96

10 15 0.12 20 7.5 0.5 3 21 1059 1077 1057 1078 0.95

11 15 0.074 12 8.1 0.3 2 19 1202 1219 1201 1220 0.93

12 15 2e-05 0.0033 19.4 1.4 2 23 1250 1272 1249 1272 0.96

13 15 0.011 1.9 10.7 1.1 3 23 1337 1357 1336 1358 0.95

14 15 0.57 95 5.3 6.6 1 23 1529 1552 1529 1552 0.96

15 15 0.0096 1.6 10.9 2.2 2 23 1567 1588 1566 1588 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.021	3.5	9.8	5.7	2	22	535	555	534	558	0.89
2	15	2.5	4.1e+02	3.3	0.2	2	19	641	658	640	660	0.93
3	15	0.056	9.2	8.5	0.1	1	23	698	722	698	722	0.98
4	15	0.009	1.5	11.0	0.7	1	22	760	781	760	781	0.96
5	15	0.42	70	5.8	0.3	2	23	796	818	795	818	0.94
6	15	0.0015	0.25	13.4	2.7	1	23	837	860	837	860	0.91
7	15	0.00048	0.08	15.0	4.9	3	23	867	888	865	888	0.96
8	15	0.00055	0.091	14.8	3.1	1	23	926	948	926	948	0.95
9	15	4e-05	0.0067	18.4	3.5	2	23	976	998	975	998	0.96
10	15	0.12	20	7.5	0.5	3	21	1059	1077	1057	1078	0.95
11	15	0.074	12	8.1	0.3	2	19	1202	1219	1201	1220	0.93
12	15	2e-05	0.0033	19.4	1.4	2	23	1250	1272	1249	1272	0.96
13	15	0.011	1.9	10.7	1.1	3	23	1337	1357	1336	1358	0.95
14	15	0.57	95	5.3	6.6	1	23	1529	1552	1529	1552	0.96
15	15	0.0096	1.6	10.9	2.2	2	23	1567	1588	1566	1588	0.97

Sequence Information

Coding Sequence: ATGACTTCGACTGATTTAGACTTTTGTCGCCTGTGTTTCCGTCAAGATGGCAATATTTCAGTTTTCAATTATGAATGCGACGACGCTTGGAGCCTTACAGATAGAATATTTGAATGCGTTTCAGTCCagATATCTCAAAATGACAAACTTCCACATATGATATGTAGGCTTTGCTTGGATCATGTTATCAAGTGGTGTGAGTTCAAAACCTACTGTGACAGGAACCAGAGATCGTGGTTCCTATGGCTGAAAAGTCTTGCCCAGGGAACTCCTCAAGAAATCTGCGAAGGCTTAGCTGAAAATGCTAGGAGGAAGAGTCTCGAGTTGGGATTCACCCGTAATTTGAACTCTCCTCGGAAGAGTGCATTTCATAATTACAAATCCATTTCTGCTGCTGCACCTAAAGGATGTCGAAATGCTGTTGTAATCTCGGGAGAGGAAATTGAGGAATCCCACAACAGTAACTCAAAGGAACTAAGGATTGAGTCCACTCTGTCTCTAGTAACTGATAAAGAAACTATTTTATCTCCTTTCCAAGCTACCCAGAAATTGACTAATGGATATGTAATCTTAGATACTCACAACTTATCTGAGAGGTTCGGCAAAAGCATTGAAAATGAGCAGCCTTCAAATAACTCTAAAACTCAATCTGAGAGTTGTATTATTATCGAAAGTCCCGAAAGAACAAATCATAGCAGTGATGAAGAGCAACACCTTAACTCGTACAATAATCAGAATAAAGATACTACAGTTGACCCAGAACAGAATTATAACAGTGGAGACAATTTGAGCAAGACACATACTGACAATTTGGCTCTTTCGAGTAATTATGATCAAGACTGTGAGGATAACTTCGAGGTTGAAAGTGCATTCTCTGAAGATATGGTTACAGATGAACCTATATCAGAAAGAGAAGTAGCTCTTTTAAATGGGGAAGAACCTGtcgaagaggaaaataatttGGACCATGTGGAATCTAATGCACCTATCCTTCAAACTTCTGAAAAAGAAGCATCCTCTGAATTTTCGATGCCAAGTCTTCCAAAAAGGTTTGTTTCAGCATGCCCTCGAGAAATTTTAAAAGAGAGACTTATGCAGGGTGTTGACAAAAGATCTTCTCCAAATGTTCTTGCTTCACAACCCAAGAGGCCTGATACTCCATACCCGCATGAAATTCTCAAGAATATGGGGCATGTTTTGGAGAGTGGTTCGACTTATAAAGTATCACCCCAGCCAACATCTAGCCCTCTTGTAAACACCTTGGATGATGGCaggcattttaatttttcaacacCATTATCTGGGGCTTCTGAAGTGACCCCAGCCAGCCCTCCCCGAAGTTTAAAGCCCGTGAGCCTCTCTCATCTCATGAAACCACAGCCTGTATCGTCTGACAGAAATTCCGAATCATCCGATAGCTTGTCTTTCCCCCAGGTTAATGTATGGAGAGTAAAACAAGAACCAGTGAGTGAAACTGAAGACTCAGATGATAATGAAGGCCAGTTCAGTAACATCTCTATCAAATTTGAGCCCTTGGACTATGTAGAACATAGTCAGGAACAGCCAATGTCTTCCCCCGAGATTCCTCCATCAAATACTACTTACTGTGATACATGTTCAAAACATTTTAGTTCTCATACTCAACTTGTGAGGCACATCCACTCTAAGATTCATAAACGTGTTGCATCTTTTGTGGCTCTTGGTAACAGGGTGGACAGTCAAACTGTTTCACAATTGACCAAGGAAATCAGATCTCAAGCTTATTTTAGAAGTTGCGCTAAAAAACAAATGATAGCAATGGCAAATGAAAAGAACATTAGTGGACTCCAGAGTGACACATCTGTTGCAGCTTCTTCCCCATTGGTTGAAATTCCTACTTCAAGCAACACTAGTCTGAGACAGGCTGATAATGAGCTCCTTGAATGTAAGGTTTGTAATGTTGTTTTGAAGTCACGTTCTTATAAAATCAAACATGATAACTCATTTTCTCACAAGTGTCAGATGGAGGCTGTTGCCAACAGCTTGGAACCACCAAACACCATTGATCCTCCTAATGCTGTTCCTGGTACTTCCTTGCTCCATGCGCCCACTTATACTTGTCCTTTTGCATCATGCAGTTCAGCTTTTGCTGACGGTGGACAGCTAATAGTTCATATGCATACTCACGGGATTTCCCTTCCTATACATGAGGTTAACAAGCAGATCGAGCTGAGTCAAACATCTATTCAAAAGAAACTTCCTGCCAAACAAATGAATTCAGATTCTGCCATAAACAAGTTTACGTGCAGAAGATGTGGTCGATTTTTTCCTAAAGCTTTATCTCTTTCCAATCACTTAAGAAGATGTAGAATTGTGCCTGCTAAGGTGACAGTCGGTCTATCTATACCTTGTCCTGTTTGTCTAGCTATGCAGAAAAATTCCAGGACTTTAACTTATCACATGAAAACGTACCACCCACAATCTGAACAGAATGTTGTTGAAAGTAATCCTCCACCACCTAAAAGAGAGTTTGTCTGCACTATTTGCTACAAGTCCTTCACTACTCGTATCCATCTCCGAGGCCACAATTACAAAGTACACGCTCAGAAACCAGTGTGTTGCAAATTTTGCAAAAAAGTGTATAACAGTAAAGATAATCTGCATGTACATTATAGGACGGCTCACCTTAAGGTCAAAGAAGGAGAATACGCTTGCTATGTCTGCTTTAAAGTGTTTCAATCTTATTCCGAATGTTGTAAGCATAGAAAAGCTGGTTGTTCattgaaaatgaaactttttagTTGTACAGAGTGTGGTCATTCTTTTAGGAGTCAGTTTTCTCTAGACAAGCATAAAGAAGAACACACTTCTACAGCCGAGGTAGAAATTAAAGAACCACCTCCACCTCCATTAGATTTGTCTTTCTTAGAGGATATACAAAATTGTGTCTGTAATATATGTAGCAGATCATACTCTTCGTATTACAATCTTCGTAGACATGTTAAAACCAGCCACGTCTCTGAAACAAATGGCTGTTCCCTGGATGATTTAATAAAAGCCAGTGCATCAGGCTTGAACATTTCTTTAGCTTCGGGAATAAAAGAAGAATCTCTCCAAGAAGCTAGTACATCTGTTGTGAATGATACTCCAGCGATTCGCAGAGTTCGCAACATTAATTGTGAGCGAAATTTTGGTTGTTTGTACTGTGAATCTAAGTTCAGTACTAACAGTAATAGACTTAGTCATATGAAAGCAGTGTGCAAGTGTGTTCCTCCAAAAGTAGTGTGTTTAAACTGCAAGGTAGAAAGGTGGCCTTGGGTAACAGGACTGTGTAAGAATTGCGGTAAagatattaatacaaaaaagagATCTGCAACAACTAGAGCTGAGAATTTATCTAAAAGGTTTAGGAGCAGTGGGCCTGAACAAATTGATTCTTTTCCGCAAGAGCTTGTTGATTCTCAATTTTCCGCACCTGAACTTGTAAACGAATCTGCTAAGCCTGCAAAAATCTCTAATAATCGTGTGTTTAGGTGCTCTGTCGGTAAAAGAACTTTTCTGTCTCAGAAGTCAATGCTTAATCACAGTACGACTTGTGATGGTTCTTGTAAAGATCAGGGAGTTTATTGCAAAGTCTGTCATCAAGTATTTGCCAATCCTAAAGTGTATATTAGACATAAACCTTGTGGTGGTAAAAAGCTCATTCAGAAACCTATGTTAGGTAAAAAGATCTTAAGAATAAATATGAATGATCCTCTTCGAGTTATACCCTGCAACTTTTgtgattataaatttaagacgaaaaaaaatgttagtaacCACATGCGTACAATTCATAATTACTATGCTTCCGCTTACAGAAAAAAGAGGTCTCTTGACCAAACCGCTGTACCTACTGAAGAAGATTCACTGATAAATATTAGTGGTAGAGAAGAGATTCCTTTGCAGGAATTTAACGAGGGAGAGCCTGTTAGTTCCACAAGCCATGATGTTGCCGATAATGCACCACCTAATCCTAATAGAAGGGCTTGTCCTGCTTGTTCTAAGCCTTTCTCTAATCATCAAGCTGTGGTACAGCATGTCAGGACCCACCACAAGAATAAGTTCTCTGTGCTCGAATGCGCATTTTGTAGTAAGAGTATTTTAAAGAGACAGTTATACGAGCATGGATTCACCTGTATAAAGGATCAATTGGCTAATATCAATACTCTCGAATGTGTTGTGTGTTCGACAATCTTCTATAGTGGAGATGAAGAGGACACCCTTTCCCTCAAGCTCCAAGAGCACATTATGAATTGTTGTGGAAAACTCAACTTAGCTAAAGGTGAGAAGttcaagaacaaagaaaaattcctctgtttaaaatgttgtatgctTTTTTCATCCAAAAAGAGTTTATACGCTCATAGTTTTGAACGCCATGGCATATTAGTGCAGACATCTCCAACATCACAACAGAAAAACAACCCTATAAATATCGACAAGGAGGTTTTAGATGTTACCCAGAGTGATTCGGTGATGCAAGAAACTGACAATGTTTTAGAGTTGGCTTCTGCAACATCGGACTCTAATTTAACTGTCTCTACCACTGAGGATACACACCCTTTCAAGTGCCACAGGTGCTGCAAACGCTTTAAAACAGCCAAGGGTCTCCTATCTCATAAATCAAGTGCACACATGTATCAGTCTCGAAAGAAGAAAAAGCCGTCCCTGCATTTAAAGTGTAAGTTTTGTCAGAGGCAGTTCTACAGCGAAGTAAAACTGAGGAACCACGAGAAGGTGCATGGCATTGTCAAGGAAGTGGTTAGAACAGAAGTGGAAGAAATCCATGAGGTTCCAGCTTCTCCTGACGTGGAAATAGTTAGTGAAACCTAG
Protein Sequence: MTSTDLDFCRLCFRQDGNISVFNYECDDAWSLTDRIFECVSVQISQNDKLPHMICRLCLDHVIKWCEFKTYCDRNQRSWFLWLKSLAQGTPQEICEGLAENARRKSLELGFTRNLNSPRKSAFHNYKSISAAAPKGCRNAVVISGEEIEESHNSNSKELRIESTLSLVTDKETILSPFQATQKLTNGYVILDTHNLSERFGKSIENEQPSNNSKTQSESCIIIESPERTNHSSDEEQHLNSYNNQNKDTTVDPEQNYNSGDNLSKTHTDNLALSSNYDQDCEDNFEVESAFSEDMVTDEPISEREVALLNGEEPVEEENNLDHVESNAPILQTSEKEASSEFSMPSLPKRFVSACPREILKERLMQGVDKRSSPNVLASQPKRPDTPYPHEILKNMGHVLESGSTYKVSPQPTSSPLVNTLDDGRHFNFSTPLSGASEVTPASPPRSLKPVSLSHLMKPQPVSSDRNSESSDSLSFPQVNVWRVKQEPVSETEDSDDNEGQFSNISIKFEPLDYVEHSQEQPMSSPEIPPSNTTYCDTCSKHFSSHTQLVRHIHSKIHKRVASFVALGNRVDSQTVSQLTKEIRSQAYFRSCAKKQMIAMANEKNISGLQSDTSVAASSPLVEIPTSSNTSLRQADNELLECKVCNVVLKSRSYKIKHDNSFSHKCQMEAVANSLEPPNTIDPPNAVPGTSLLHAPTYTCPFASCSSAFADGGQLIVHMHTHGISLPIHEVNKQIELSQTSIQKKLPAKQMNSDSAINKFTCRRCGRFFPKALSLSNHLRRCRIVPAKVTVGLSIPCPVCLAMQKNSRTLTYHMKTYHPQSEQNVVESNPPPPKREFVCTICYKSFTTRIHLRGHNYKVHAQKPVCCKFCKKVYNSKDNLHVHYRTAHLKVKEGEYACYVCFKVFQSYSECCKHRKAGCSLKMKLFSCTECGHSFRSQFSLDKHKEEHTSTAEVEIKEPPPPPLDLSFLEDIQNCVCNICSRSYSSYYNLRRHVKTSHVSETNGCSLDDLIKASASGLNISLASGIKEESLQEASTSVVNDTPAIRRVRNINCERNFGCLYCESKFSTNSNRLSHMKAVCKCVPPKVVCLNCKVERWPWVTGLCKNCGKDINTKKRSATTRAENLSKRFRSSGPEQIDSFPQELVDSQFSAPELVNESAKPAKISNNRVFRCSVGKRTFLSQKSMLNHSTTCDGSCKDQGVYCKVCHQVFANPKVYIRHKPCGGKKLIQKPMLGKKILRINMNDPLRVIPCNFCDYKFKTKKNVSNHMRTIHNYYASAYRKKRSLDQTAVPTEEDSLINISGREEIPLQEFNEGEPVSSTSHDVADNAPPNPNRRACPACSKPFSNHQAVVQHVRTHHKNKFSVLECAFCSKSILKRQLYEHGFTCIKDQLANINTLECVVCSTIFYSGDEEDTLSLKLQEHIMNCCGKLNLAKGEKFKNKEKFLCLKCCMLFSSKKSLYAHSFERHGILVQTSPTSQQKNNPINIDKEVLDVTQSDSVMQETDNVLELASATSDSNLTVSTTEDTHPFKCHRCCKRFKTAKGLLSHKSSAHMYQSRKKKKPSLHLKCKFCQRQFYSEVKLRNHEKVHGIVKEVVRTEVEEIHEVPASPDVEIVSET

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00743106;
90% Identity: iTF_00743106;
80% Identity: -