Basic Information

Insect: Gerris buenoi
Gene Symbol: -
Assembly: GCA_001010745.2
Location: KZ651201.1:204717-211337[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.024 3.3 9.9 5.7 2 22 500 520 499 523 0.89

2 15 2.9 3.9e+02 3.4 0.2 2 19 606 623 605 625 0.93

3 15 0.024 3.3 9.9 0.2 1 23 661 685 661 685 0.98

4 15 0.0077 1.1 11.5 0.3 1 22 723 744 723 744 0.95

5 15 1.2 1.7e+02 4.5 0.3 2 23 759 781 758 781 0.94

6 15 0.00072 0.098 14.7 2.0 1 23 801 824 801 824 0.92

7 15 0.00017 0.023 16.7 2.4 2 23 830 852 829 852 0.96

8 15 0.00063 0.086 14.9 3.1 1 23 890 912 890 912 0.95

9 15 7.1e-05 0.0096 17.9 2.8 2 23 940 962 939 962 0.96

10 15 0.071 9.7 8.4 0.9 3 22 1023 1042 1021 1042 0.96

11 15 0.085 12 8.2 0.3 2 19 1166 1183 1165 1184 0.93

12 15 2.6e-05 0.0035 19.2 1.6 2 23 1214 1236 1213 1236 0.96

13 15 0.018 2.4 10.3 0.2 3 23 1301 1322 1300 1322 0.97

14 15 0.38 52 6.1 6.5 1 23 1493 1516 1493 1516 0.96

15 15 0.011 1.5 11.0 2.2 2 23 1531 1552 1530 1552 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.024	3.3	9.9	5.7	2	22	500	520	499	523	0.89
2	15	2.9	3.9e+02	3.4	0.2	2	19	606	623	605	625	0.93
3	15	0.024	3.3	9.9	0.2	1	23	661	685	661	685	0.98
4	15	0.0077	1.1	11.5	0.3	1	22	723	744	723	744	0.95
5	15	1.2	1.7e+02	4.5	0.3	2	23	759	781	758	781	0.94
6	15	0.00072	0.098	14.7	2.0	1	23	801	824	801	824	0.92
7	15	0.00017	0.023	16.7	2.4	2	23	830	852	829	852	0.96
8	15	0.00063	0.086	14.9	3.1	1	23	890	912	890	912	0.95
9	15	7.1e-05	0.0096	17.9	2.8	2	23	940	962	939	962	0.96
10	15	0.071	9.7	8.4	0.9	3	22	1023	1042	1021	1042	0.96
11	15	0.085	12	8.2	0.3	2	19	1166	1183	1165	1184	0.93
12	15	2.6e-05	0.0035	19.2	1.6	2	23	1214	1236	1213	1236	0.96
13	15	0.018	2.4	10.3	0.2	3	23	1301	1322	1300	1322	0.97
14	15	0.38	52	6.1	6.5	1	23	1493	1516	1493	1516	0.96
15	15	0.011	1.5	11.0	2.2	2	23	1531	1552	1530	1552	0.97

Sequence Information

Coding Sequence: ATGACATTTTTGTTGCAGATATCTCAAAATGACAAACTTCCACATATGATATGTAGGCTTTGCTTGGATCATGTTATTAAGTGGTGTGAGTTCAAAACCTACTGTGACAGGAATCAGAGATCGTGGTTCCTATGGCTGAAAAGTCTTGCCCAGGGAACTCCTCAAGAAATCTGCGAAGGCTTAGCCGAAAATGCTAGGAGGAAGAGTCTCGAGTTGGGATTCACCCGTAATTTGAACTCTCCTCGGAAGAGTGCATTTCAGAATTACAAACCCCTTTCTGCTGCTGCACCTAAACGATGTCGTAATGCCGATGTAATCTCGGGAGAGGAAATCGAAGAATCTCATAACAGTAACTCAAAGGAACTAAGGATTGAGTCCACTCTGTCTCTAGTAACTGACaaagaaactattttatctCCTTTCCAAGCTACCCAGAAATTGACTAATGGTTATGTAATCTTAGATACTCACAACTTATCTGAAAGGTTCGGCAAAAGCATTGATAATGAACAGCCTTCAAGTAACTCTAAAAATCAATCTGAGAGTTGTATTATTATCGAAAGTCCCGAAAGAACAAATCATAGCAGTGATGAAGAGCAACACCTTAACATATACAATAATCAGAATAAAGATGCTACAGTTGACCCAAAACAGAATTATAACAGTGGAGACAATTTGAGCACGACACATACTGACAATTTGGCTCTTTTGAGTAATCACGATCAAGACTGTGAGGATAACTTTGAGGTTGAAAGTGCATTTGACTCTGAAGACATGGTTACTGACGAACCTTTATCAGAAAGAGAAGTAGCTCTTTTAAATGGGGAAGAACCTGTGGAAGAGGAAAATAATTTGGACCATGTGGAATCCAATGCACCTATGCTTCAAACTTCTGAAAAAGAAGCATCCTCTGAATTTTCTATGCCGAGTCTTCCAAAAAGGTTTGTTTCAACATGCCCTCGAGAAATCTTAAAAGAGAGACTTATGCAGGGTGTTGACAAAAGATCTTCTCCAAATGGTCTTGCTTCACAACCCAAGAGGCCTGATACTCCGTACCCGCATGAAATTCTCAAGAATATGGGGCATGTTTTAGAGAGTGGTTCGACTTATAAAGTATTACCCCAGCCGACATCAAGCCCTCTTGTAAGCACCTTGGATGATGgcaggaattttaatttttctacaccATTATCTGGGGCTTCTGAAGTGACCCCAGCAAGCCCTCCCCGAAGTTTAAAGCCTGTGAGCCTCTCACATCTCATGAAGCCACAGGCTGTTTCGTCTGACAGAAATTCTGAATCATCCGACAGCTTGTCTTTCCCCCAGGTTAATGTACAGTGGAGAGTAAAACAAGAACCAGTGAGTGAAACTGAAGACTCCGATGATAACGAAGGCCAGTTCAGTAACATCTCTATCAAATTCGAGCCCTTGGACTATGTAGAACATAGTCAGGAACAGCCAATGTCTTCCCCTGAGATTCCTCCATCAAATACTACTTACTGTGATACATGTTCAAAACATTTTAGTTCTCATACTCAACTTGTGAGGCACATCCACTCTAAGATTCATAAACGTGTTGCTTCTTTTGTGGCTCTTGGTAACAGTGTGGACAGTCAAACTGTTTCACAATTGACCAAGGAAATCAGATCTCAAGCTTATTTTAGAAGTTGTgctaaaaaacaaatgatagCAATGGCAAATGAAAAGAACATTAGTGGACTCCAGAGTGACGCATCTGTTGTCGCTTCTTCCCCATTGGTTGAAATTCCTACTTCAAGCAACACTAGTCTGAGACAAGCGGATAATGAGCTCCTTGAATGTAAGGTTTGTAATGTTGTTTTGAAGTCACGTTCTTATAAAATCAAACACGATAACTCATTTTCTCACAAGTGTCAGATGGAGGCTGCTGCCAACCACTTGGAATCCACTATTGATACTCCTAATGTTTTTCCTGGTCCTTCCTTGCTCCATGCGCCCACTTATACTTGCCCTTTTGCATCGTGCAGTTCAGCTTTTTCTGATGGTGGTCAACTAATTGTTCATATGCATACTCACGGAATTTCCCTTCCTATGCACGAGGTTAACAAGCAGATCGAGCTGAGTAAAACATCTATTCAAAAGAAACTTCCTACCAAACAAATGAATTCAGATTCTTCCGTAAACAAGTTTCCATGCAGGAGATGTGATAGATCTTTTCCTAAAGCTTTATCTCTTTCCAATCACTTGAGAAGATGTAGAATTGTGCCTGCTAAGGTGACAGTCGGTCCATCTATACCTTGTCCTGTTTGTCTAGTTATGCAGAAAAATTCTAGGACTTTAAGTTATCACATGAAAACATACCACTCACAATCTGTTGAACAGAATGTTGTTGAAAGTGATCCTCCACCACCTAAAAGAGAGTTTGTCTGCACTATTTGCTACAAGTCCTTCACTACTCGTATCTATCTCCGAAGCCACAATTACAAAGTACACGCTCAGAAACCAGTGAGTTGCAAATTttgcaaaaaagtgtataaCAGTAAAGATAATTTGCATGTACATTATAGGTCGGCTCACCTTAAGATCAAAGAAGGAGAATACGCTTGCTATGTCTGCTTTAAAGTGTTTCAATCTTATTCCGAATGTTGTAAGCATAGAAAAGCCGGTTGTTCATTGAAACTGAAACTTTTTAGTTGTACAGAGTGTGGTCATTCTTTTAGGAGTCAGTTTTCTCTAGACAAGCATAAAGAAGAACACACTTCTACATCTGTGGTAGAAAGTAAAGAACCACCTCCACCTCCATTAGATTTGTCTTTCTTAGAGGATATACAAAATTGTGTGTGTAGTATATGTAACAGAATATACTCTTCGTATTACAATCTTCGTAGACATGTCAAGACCAGCCACATCCCTGAAACAAATGGCTGTTCCCTGGATGATTTAATAAAAGCCAGTGCATCAGGCTTGAACATTTCTTCAGCTTCGGGAATAAAAGAAGAATCTCTCCAAGAAGCTAGTACATCTGTTACGAATGATACTCCAGTGATTCGCAGAACTCGCAACCATAATTGTGAGCGAAATTTCGGTTGTTTGTATTGTGAATCTAAGTTCAGTACTAACAGTAACAGACTTAGTCATATGAAAACAGCGTGCAAGTGTGTTCCTCCAAAAGTGGCGTGTTTAAACTGCAAGGTAGAAAGGTGGCCTTGGGTAACAGGACCGTGTAAGAATTGCCGTCAagatattaatacaaaaaagagACCTGCAACATCTAGAGCTGAGAATGTCCCTAAAAGGTTTAGGAGCAGTGGGCCTGAACAAATTGATTCTTTTCCACAAGAGCTTGTTGATTCTCAATTTTCCGCACCTGAACTTGTAAACGAATCTGCTAAGCCTgcaaaaatctttaataatcgTGTGTTTAGGTGCTCTGTCGGTAAAAGAACTTTTCTGTCTCATAAGTCAATGCTTTATCACAGTACGAATTGTGACGGTTCTTGTAAAGATCAGGGAGTTTATTGCAAAGTCTGTCATCAAGTATTTGCCAATCCTAAAGTGTATATTAGACATAAACCTTGTGGTGGTAAAAAGCCCATTCAGAAACCTGTGTTAGGTAAAAAGAGGTCAAGAATAAATATGAATGATCCTCTTCGAGTAATACCCTGCAAATTTTGTGATTATAAAtttaggacaaaaaaaaatgttagtaacCATATGCGTACAGTTCATAATTACTATGCTTCCGCTTTCAGAAAAAAGAAGTCTCTTTACCAAACCCCAGTAGCTTCTGAAGAAGATTCAATTGTAAATGTCAGTGGTAAAGAAGAGATTCCTTTGCAGGAATTTTACGAGGGAGAGCCTGTTAGTTCCACAAGCCATGATGTCGCCGATAACACAACACCTAATCCTAATAGAAGCGCTTGTCCTGCTTGCTCTAAGCCTTTCTCTACTCATCAAGCTGTGGTACAGCATGTCAGGACCGCCCACAAGAATAAGTTCTCCGTGCTCGAATGCGCTTTTTGTAGTAAGAGTATTTTAAAGAGACAGTTATACGAGCATGGATTCACCTGTATAAAGGATCAATTGGCTAATATCAATACACTCGAATGTGTTGTGTGTTCAACGATCTTCTACAGTGGAGACGAAGAGGACACCCTTTCCCTCAAGCTCCAAGAGCACATTATGAATTGTTGTGGAAAACTGACCTTAGCTAAAGGTGAGAAGttcaagaacaaagaaaaattcCTCTGTTTAAAATGTTGCATGCTTTTTTCATCCAAAAAGAGTTTATACGCTCACAGTTTCGAACGCCACGGCATATTAGTGCAGACATCTCCAACATCACAACAGAAAAACAACCCTATAAATACCGAAAAAGAGGTTTTAGACGTTACCCAGAGTGATTCGGTGATGCAAGAAACCGACAGTGTTTTGGAGTTGGCCTCTGCAACATCGGACTCTAATTTAACTGTCTCTACCACTGAGGATACACACCCTTTCAAGTGCCACAGGTGCTGCAAACGTTTCAAAACACCTAAGGGTCTCCTATCTCATAAATCAAGTGCACATATGTATCAGTctcgaaagaagaaaaaaccgCCCCTCCATTTAAAGTGTAAGTTTTGTCAGAGGCAGTTCTACAGTGAAGTAAAACTGAGGAACCACGAGAAGGTGCATGGCATTGTCAACGAAGTGGTTAGAACAGAAGTGGAAGAAATCCATGAGGTTCCTGCGTCTCCTGATGTGGAAATAGTTAGTGAAGCCTAG
Protein Sequence: MTFLLQISQNDKLPHMICRLCLDHVIKWCEFKTYCDRNQRSWFLWLKSLAQGTPQEICEGLAENARRKSLELGFTRNLNSPRKSAFQNYKPLSAAAPKRCRNADVISGEEIEESHNSNSKELRIESTLSLVTDKETILSPFQATQKLTNGYVILDTHNLSERFGKSIDNEQPSSNSKNQSESCIIIESPERTNHSSDEEQHLNIYNNQNKDATVDPKQNYNSGDNLSTTHTDNLALLSNHDQDCEDNFEVESAFDSEDMVTDEPLSEREVALLNGEEPVEEENNLDHVESNAPMLQTSEKEASSEFSMPSLPKRFVSTCPREILKERLMQGVDKRSSPNGLASQPKRPDTPYPHEILKNMGHVLESGSTYKVLPQPTSSPLVSTLDDGRNFNFSTPLSGASEVTPASPPRSLKPVSLSHLMKPQAVSSDRNSESSDSLSFPQVNVQWRVKQEPVSETEDSDDNEGQFSNISIKFEPLDYVEHSQEQPMSSPEIPPSNTTYCDTCSKHFSSHTQLVRHIHSKIHKRVASFVALGNSVDSQTVSQLTKEIRSQAYFRSCAKKQMIAMANEKNISGLQSDASVVASSPLVEIPTSSNTSLRQADNELLECKVCNVVLKSRSYKIKHDNSFSHKCQMEAAANHLESTIDTPNVFPGPSLLHAPTYTCPFASCSSAFSDGGQLIVHMHTHGISLPMHEVNKQIELSKTSIQKKLPTKQMNSDSSVNKFPCRRCDRSFPKALSLSNHLRRCRIVPAKVTVGPSIPCPVCLVMQKNSRTLSYHMKTYHSQSVEQNVVESDPPPPKREFVCTICYKSFTTRIYLRSHNYKVHAQKPVSCKFCKKVYNSKDNLHVHYRSAHLKIKEGEYACYVCFKVFQSYSECCKHRKAGCSLKLKLFSCTECGHSFRSQFSLDKHKEEHTSTSVVESKEPPPPPLDLSFLEDIQNCVCSICNRIYSSYYNLRRHVKTSHIPETNGCSLDDLIKASASGLNISSASGIKEESLQEASTSVTNDTPVIRRTRNHNCERNFGCLYCESKFSTNSNRLSHMKTACKCVPPKVACLNCKVERWPWVTGPCKNCRQDINTKKRPATSRAENVPKRFRSSGPEQIDSFPQELVDSQFSAPELVNESAKPAKIFNNRVFRCSVGKRTFLSHKSMLYHSTNCDGSCKDQGVYCKVCHQVFANPKVYIRHKPCGGKKPIQKPVLGKKRSRINMNDPLRVIPCKFCDYKFRTKKNVSNHMRTVHNYYASAFRKKKSLYQTPVASEEDSIVNVSGKEEIPLQEFYEGEPVSSTSHDVADNTTPNPNRSACPACSKPFSTHQAVVQHVRTAHKNKFSVLECAFCSKSILKRQLYEHGFTCIKDQLANINTLECVVCSTIFYSGDEEDTLSLKLQEHIMNCCGKLTLAKGEKFKNKEKFLCLKCCMLFSSKKSLYAHSFERHGILVQTSPTSQQKNNPINTEKEVLDVTQSDSVMQETDSVLELASATSDSNLTVSTTEDTHPFKCHRCCKRFKTPKGLLSHKSSAHMYQSRKKKKPPLHLKCKFCQRQFYSEVKLRNHEKVHGIVNEVVRTEVEEIHEVPASPDVEIVSEA*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00744059;
90% Identity: iTF_00744059;
80% Identity: -