Glac012498.1
Basic Information
- Insect
- Gerris lacustris
- Gene Symbol
- GCFC2
- Assembly
- GCA_951217055.1
- Location
- OX578276.1:119495317-119507953[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.4e-28 9.8e-24 86.0 1.2 1 272 118 331 118 333 0.90
Sequence Information
- Coding Sequence
- ATGCTGGAAGAGCGAGTGCTAACAGCATTTTCACGCCGTGTCCAAGAGGGCACTGGGCGTAGGCGCCAGGATGTACAGGATCAGGCACATGAGCTCCCCTCGAATCCATTAATGGCTAATTCAATAGGAAGAGACGAATTTATGATTCGAAGGATTGCTGAGAGGGAAGGAAGAAGAATCAGGCGGCAGAGACAACGAGAATTGAAAGGACTCAACATAGGACACAATGAGGGCATGTCTTCAGATGACGAATTGACTGAAGTTCAACAAATTGCTCACAACAACACTAGAGAAATTATAGAAAAAGATGCAAAACTAGTATTTGATGATGTATTTGAAGATTTTTCAACTTTAGAAGGAATCCTATCTAAATTCCAGACTTGGAGAGAAAAGGATATGCATTCATATACAGAGGCTTATGTATCTCTCTGTTTACCTAAAATATTGGGGCCAATAATAAGGCTTAATGTTCTCTTTTGGAATCCACTATTACCTgGTTCTACTGAGCTAGATAAGAGTTCCTGGTATAAAGCTACCTTGCTTTTTGGTATGAAACCAAATGAATCTGAAGACAGTATTAAAAAAGATCCTGATGTCCAGCTTCTTCCTAGAATCATGGATAGGGTTATTCTACCTAGGCTCAACCAATTAGTGAAGGAGGGCTGGGATCCAATGTCTAGCTCACAAACTATATGCCTGGTGTCTCTAGTAACTCGACTCATACAGGAATATCCTACTCTTACTCACAATTCCAAAACAGTCCGTCAACTCATGGAATCAGTTATTGCTAAGATTAATTCTGCTTTGGACAGCGATGTCTTCATTCCATTATATAGCAAAGTGAGATTAACTGATGccaaagtaaataatttcttcATGCGCCAGTGTGCTTCTGCAGTCAAGTTATTAGGAAACATAGCTCGGTGGCAGGGTTTACTTAACGATAATATACTTTATGAACTTGCCATTGATTCATTACTTAATCGTTACTTAATGATGGCTATAGGGTCAACTACTCCTTTACAGGCAGCCAACATCATTCACATGATTGGAAGTGTTCTGCCGAGAATATGGATCAGTTCAAAGTTACCTAGActcaacatatttttaaatcaaatcaggACAATTTCTCTTCAACTCTCCGCAGATATACCCATTGAAAGggATGCAATAGAGAGAATGtcaaatatattgtaa
- Protein Sequence
- MLEERVLTAFSRRVQEGTGRRRQDVQDQAHELPSNPLMANSIGRDEFMIRRIAEREGRRIRRQRQRELKGLNIGHNEGMSSDDELTEVQQIAHNNTREIIEKDAKLVFDDVFEDFSTLEGILSKFQTWREKDMHSYTEAYVSLCLPKILGPIIRLNVLFWNPLLPGSTELDKSSWYKATLLFGMKPNESEDSIKKDPDVQLLPRIMDRVILPRLNQLVKEGWDPMSSSQTICLVSLVTRLIQEYPTLTHNSKTVRQLMESVIAKINSALDSDVFIPLYSKVRLTDAKVNNFFMRQCASAVKLLGNIARWQGLLNDNILYELAIDSLLNRYLMMAIGSTTPLQAANIIHMIGSVLPRIWISSKLPRLNIFLNQIRTISLQLSADIPIERDAIERMSNIL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00742797;
- 90% Identity
- iTF_00742797;
- 80% Identity
- -