Basic Information

Insect: Gerris buenoi
Gene Symbol: -
Assembly: GCA_001010745.2
Location: KZ651480.1:35019-40423[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 9.4 1.3e+03 1.7 0.2 2 20 231 249 230 251 0.91

2 20 0.14 19 7.5 0.1 2 23 310 331 309 331 0.95

3 20 0.065 8.9 8.5 0.1 2 23 343 364 342 364 0.96

4 20 0.71 96 5.3 0.3 1 23 407 430 407 430 0.95

5 20 0.13 18 7.6 3.6 2 23 434 455 434 455 0.93

6 20 0.012 1.6 10.9 0.2 2 23 463 485 462 485 0.96

7 20 0.87 1.2e+02 5.0 3.0 2 23 493 515 492 515 0.95

8 20 0.27 36 6.6 0.6 3 23 581 601 580 601 0.96

9 20 0.11 15 7.8 0.3 2 23 607 629 606 629 0.92

10 20 0.012 1.6 10.9 1.6 2 23 665 687 664 687 0.92

11 20 0.0053 0.73 12.0 0.3 1 23 789 811 789 811 0.96

12 20 0.17 23 7.2 0.4 3 21 849 867 848 868 0.87

13 20 0.11 16 7.8 0.2 2 23 874 896 874 896 0.92

14 20 0.46 62 5.9 7.0 2 23 901 922 900 922 0.93

15 20 0.00029 0.039 16.0 0.8 1 23 930 952 930 952 0.97

16 20 0.0061 0.83 11.8 0.2 1 23 958 980 958 980 0.97

17 20 0.0013 0.17 13.9 6.8 1 23 986 1008 986 1008 0.98

18 20 0.0029 0.39 12.8 0.3 2 23 1015 1037 1015 1037 0.96

19 20 0.0021 0.28 13.3 2.4 1 23 1043 1065 1043 1065 0.98

20 20 0.002 0.27 13.3 0.8 1 23 1071 1094 1071 1094 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	9.4	1.3e+03	1.7	0.2	2	20	231	249	230	251	0.91
2	20	0.14	19	7.5	0.1	2	23	310	331	309	331	0.95
3	20	0.065	8.9	8.5	0.1	2	23	343	364	342	364	0.96
4	20	0.71	96	5.3	0.3	1	23	407	430	407	430	0.95
5	20	0.13	18	7.6	3.6	2	23	434	455	434	455	0.93
6	20	0.012	1.6	10.9	0.2	2	23	463	485	462	485	0.96
7	20	0.87	1.2e+02	5.0	3.0	2	23	493	515	492	515	0.95
8	20	0.27	36	6.6	0.6	3	23	581	601	580	601	0.96
9	20	0.11	15	7.8	0.3	2	23	607	629	606	629	0.92
10	20	0.012	1.6	10.9	1.6	2	23	665	687	664	687	0.92
11	20	0.0053	0.73	12.0	0.3	1	23	789	811	789	811	0.96
12	20	0.17	23	7.2	0.4	3	21	849	867	848	868	0.87
13	20	0.11	16	7.8	0.2	2	23	874	896	874	896	0.92
14	20	0.46	62	5.9	7.0	2	23	901	922	900	922	0.93
15	20	0.00029	0.039	16.0	0.8	1	23	930	952	930	952	0.97
16	20	0.0061	0.83	11.8	0.2	1	23	958	980	958	980	0.97
17	20	0.0013	0.17	13.9	6.8	1	23	986	1008	986	1008	0.98
18	20	0.0029	0.39	12.8	0.3	2	23	1015	1037	1015	1037	0.96
19	20	0.0021	0.28	13.3	2.4	1	23	1043	1065	1043	1065	0.98
20	20	0.002	0.27	13.3	0.8	1	23	1071	1094	1071	1094	0.97

Sequence Information

Coding Sequence: ATGATGGACGGTTTTACGACCGAACTGTTTTGTTACATTTGTGATAATGCTACTGACTATGATACAAGTGGTAAACTTCTTTGTAAAGTGACCAATACTTCTCGGGCATCTTTCCCTAAAGTTATAAGTACTCTAATCAGCGACGAATTCGTTTTGATTGTCGGTAAAGAGGATGTTATCTGTGAACAGTGTGCAGATATTGTCAACCGATTAGATGAATTACAACACGAAATTTCTCTCGTTCGTAAGATCCTTTCTGAATTTTTAGCCAAGAAATACCACGTCCCTATAAATGATcccTATGATGATCTGGACAAAGGAGTAGAAGATTTTGAGGAGCGAGACCAGAATGAATTCTTTGAGTCAAGATTTTGTGATGTAGTTCATTCTGATCCCAATGCTCAGAATGAAAACAATGCTCTCATTCAGGATGTACAATTTAAGACAGGTATAGAGAAGGAAAAGCTTTGTTGGCAGAATAGTGAGCAAAATGTCGATGATTACATTGTAAATTGTGAGCCTGGAAGTTCAGTTGCAAAAAATTCTGTTATCGATGACAATGCTTCAAATAACACTGTAACTGATGAATTAGGTAGTGAAATGTGTTTTGAATCTTTAGAAAATAGTGAAGTTCTGGGCTACACTcttgataacaaaaaaaataatgaagatatTAGTGCAGCTTATGTAGTATGTGAGTTGTGTAACACTTTGATGAAAACAGCTTCTGAAATGCGCAATCATGTTTGTGAAAACCAACAATtaggaagcaataataaaaaggtTACTTTTAAAGAGAATATTTGTGTTAATGATCAGagccaaaataaaaacaaaggtgATAGTGTGTTTGAAGTGTCTGCTACGGGAAGTCTGTTAGAAAGAGAATTAACCAAACCTTTGAAGAAAggtattaaattgaatttgtgTTGTTTTATATGTGATGCGATTCTGCCGAGTCGATCAGATTTAGCCTTGCATGTACTGAGCCACTACCCTGTCAAAAGGTCCAAAAAGAAGGGCACAGTGTGTCCAGTTTGTGATAGTAATTATACTTCCCTTATAGATTTTATGAATCATTATGATATGCATGTTGATGGTTCAGGTAACAAAAGAAAAGACAAAGAATCAGCAATTTGTAACAGAAAAGAGAAAGCTATCTCTGAAAAAGAATCCTCAACTGGAGTACCTCAACCCTGTGACGACATCTCAGATACATTTGCATGCCCTTTTTGTAAAAAGGCTAATAGTAATGATCTAGAGTTAAATGAtcacttgaaaataaaacacaatattaaTACCTGTCATCACTGTAAGAAAGAATTCCCatctgatttaaaattaaaagaacacTTGGTTCTTCATGAAGCTAAAGTTAAACCAAATCAATGTGAATACTGCTTGTCACGTTTTAATTCTGCAAAGGAATTAGAGAGCCACATTGAATCAGCACACGATCAAATTAAAGTGACTAAATCATGTCCCCTCTGTAGGAAGAGATGTGGTTCTAATTTCTCTGTCAAAAGTCATGTGCTTAAGAGTCACTATATACCTGTACTGCAGCAAGAGATCAGAGAAAAATATTCCCACGGTTCAGATCTTGTTGATGATATGAAGAGCTTAGGTGCATctgaaaaatttattaaaagcattATGGATATACATAAACCAATTGTAACcgaaaacaatcctaaaaactccaaaattattattaatgtcgaAGCTAGCGATGTTAGTTTCTGTTTGCTCTGTGGATTTTCAAGTAAAAGTGTGCCGAATTTAGACAGGCATCGTGAGAAACATTCCGCCAAGAAAATTCAGTGTCCTTTATGTGAGTACTTGAGCTGTGATAGTGACGAACTTACAGTCCATCTCTCAGATTCCCATGACATATTGATTTCTGAGAACTGTTGTCCACATTGCCTCAGTGAACCTGAAGAAGATATAATACTACATATGAAAGCTTTGCATGGAAAGTTTTACACTCATCtgacttgttttgtttgcaAAGAAATGTTTTTCAGCAAGGAAAATCTGAAGTATCACTTCAGCATCACACATTTGATCTCAGAGCAAAGATTTGGAGAAAAGGGAGATGATATGGAAATTGATGACAACAGTGTTGAAGCTGATGATCCTTTAGCAAACGGAAGTAGAGAATGTACTGATGATACCATGAACAATGAACTCACTGCTGCTTTAGAGAGTATTATTCCTGATTCACCACAGCAAGTTGAGCCTCTAGAAGCTGGGGAAAACAGCGAAAGCTTAACATCCTACCAAGACCATGTTTCAGCAGCACTCTCACTTTGTGACAAAGTAAATAATCAAGAGAATGAAATGTGCTTAGAACTTCAAAAAGGATTTATTTGCACCATATGTAGAAAAGAGTGTGTGTCTGCAGATGAGTTGGCTGTACACACTGGCAAACAttcaaaaaaagcaaataacaCTTCTTGTTTTTTCTGTTCTTTAGTACTTTATGACAACGAATGTCTCCATCAACATGTTATGAAAGAACACCcacaaaatattcataaatattgttttccGTGTAAAAAACCATTCAATTCTAAATTTGCTTTAGTTAAACACCTCAGCTCAAGGTCTTGCAGCAGGGTGTGTGTTATATGcaataaacagtttaaaaaaattgcacctTACATAAGACATTTAACTTACAGTCATAGAAAAGATTTAAAATGCTCCCATTGCAATAAATTGtgtagaaatttaaaacatttgaacTACCATGAAGCATTACACGAGAGGTACAAGGGTAAAGTGTTTAAGTGTGACGAGtgcgaaaaaacatttttgactccCAGTAGTTTAAAATCTCATTCCATATCACATACAGGTAACTACCAGTACGTGTGTGAGTTCTGTGGAAGAGGATTTCTTAGCAGCTACGGTCTCAACGAACACCGAGCTAGTCATACAAGAGATATCCGCTATTGTTGTGAGATCTGTGGTAAGAGTTTCCGCCTCTACGATACTTATCATAGGCACAGGCGACAGCACGATAATCCATACCCAGCAGAATGCTCAGAGTGTGGTATTAAGTTCCGTAATGCCTCTCGTGTAGCTGAACACAAGAGAAAAGTTCACACAGGTGAGCGTCCCTATGTTTGCCCTTATTGTCCCATGGCATTTAATGTAACTTCATCCTACCATATTCACCTTTGTAAGCATACAAAGATTTATCCTTACAATTGTGAAATTTGTAAGAGAGGTTTTGCCAGCAGGTTCAAATATGCTAACCATCTTGCTACTCGGCACAATGATTATTCTTTTGtcacttcaaaaaatgaaaCTGATAACAGTGATGAAAAGTAG
Protein Sequence: MMDGFTTELFCYICDNATDYDTSGKLLCKVTNTSRASFPKVISTLISDEFVLIVGKEDVICEQCADIVNRLDELQHEISLVRKILSEFLAKKYHVPINDPYDDLDKGVEDFEERDQNEFFESRFCDVVHSDPNAQNENNALIQDVQFKTGIEKEKLCWQNSEQNVDDYIVNCEPGSSVAKNSVIDDNASNNTVTDELGSEMCFESLENSEVLGYTLDNKKNNEDISAAYVVCELCNTLMKTASEMRNHVCENQQLGSNNKKVTFKENICVNDQSQNKNKGDSVFEVSATGSLLERELTKPLKKGIKLNLCCFICDAILPSRSDLALHVLSHYPVKRSKKKGTVCPVCDSNYTSLIDFMNHYDMHVDGSGNKRKDKESAICNRKEKAISEKESSTGVPQPCDDISDTFACPFCKKANSNDLELNDHLKIKHNINTCHHCKKEFPSDLKLKEHLVLHEAKVKPNQCEYCLSRFNSAKELESHIESAHDQIKVTKSCPLCRKRCGSNFSVKSHVLKSHYIPVLQQEIREKYSHGSDLVDDMKSLGASEKFIKSIMDIHKPIVTENNPKNSKIIINVEASDVSFCLLCGFSSKSVPNLDRHREKHSAKKIQCPLCEYLSCDSDELTVHLSDSHDILISENCCPHCLSEPEEDIILHMKALHGKFYTHLTCFVCKEMFFSKENLKYHFSITHLISEQRFGEKGDDMEIDDNSVEADDPLANGSRECTDDTMNNELTAALESIIPDSPQQVEPLEAGENSESLTSYQDHVSAALSLCDKVNNQENEMCLELQKGFICTICRKECVSADELAVHTGKHSKKANNTSCFFCSLVLYDNECLHQHVMKEHPQNIHKYCFPCKKPFNSKFALVKHLSSRSCSRVCVICNKQFKKIAPYIRHLTYSHRKDLKCSHCNKLCRNLKHLNYHEALHERYKGKVFKCDECEKTFLTPSSLKSHSISHTGNYQYVCEFCGRGFLSSYGLNEHRASHTRDIRYCCEICGKSFRLYDTYHRHRRQHDNPYPAECSECGIKFRNASRVAEHKRKVHTGERPYVCPYCPMAFNVTSSYHIHLCKHTKIYPYNCEICKRGFASRFKYANHLATRHNDYSFVTSKNETDNSDEK*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00744008;
90% Identity: iTF_00744008;
80% Identity: iTF_00743076;