Basic Information

Insect: Gerris buenoi
Gene Symbol: -
Assembly: GCA_001010745.2
Location: KZ651733.1:238033-260299[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 28 0.0072 0.97 11.6 1.9 1 23 190 212 190 212 0.95

2 28 1.5e-05 0.002 20.0 0.5 1 23 225 247 225 247 0.98

3 28 9.1e-05 0.012 17.5 0.2 1 23 260 283 260 283 0.97

4 28 0.00099 0.14 14.3 1.7 2 23 290 312 289 312 0.95

5 28 0.012 1.7 10.8 0.9 1 23 442 465 442 465 0.95

6 28 0.046 6.3 9.0 0.1 3 21 473 491 472 492 0.92

7 28 3.3 4.4e+02 3.2 0.9 1 23 503 525 503 525 0.97

8 28 0.0046 0.63 12.2 0.3 1 23 565 588 565 588 0.95

9 28 0.0055 0.75 11.9 0.1 1 23 599 622 599 622 0.97

10 28 3.1 4.2e+02 3.3 1.8 2 19 629 648 628 653 0.84

11 28 0.22 29 6.9 0.1 2 23 662 684 661 684 0.94

12 28 0.0012 0.16 14.0 1.2 2 23 691 713 690 713 0.94

13 28 0.023 3.1 10.0 4.9 1 23 721 743 721 743 0.96

14 28 0.00089 0.12 14.4 0.3 2 23 810 832 809 832 0.95

15 28 0.43 58 6.0 0.5 2 23 839 860 838 860 0.95

16 28 0.0068 0.92 11.6 3.6 1 21 883 903 883 904 0.94

17 28 0.0019 0.25 13.4 1.9 2 23 926 948 925 948 0.96

18 28 0.00062 0.085 14.9 0.9 2 23 982 1005 981 1005 0.96

19 28 1 1.4e+02 4.8 0.9 1 23 1012 1035 1012 1035 0.96

20 28 0.00024 0.032 16.2 3.2 2 23 1073 1094 1073 1094 0.97

21 28 0.041 5.6 9.2 0.3 1 23 1099 1121 1099 1121 0.94

22 28 0.02 2.7 10.2 0.1 1 23 1211 1234 1211 1234 0.93

23 28 0.11 15 7.8 0.3 3 23 1320 1341 1319 1341 0.96

24 28 0.24 33 6.8 0.5 2 23 1348 1370 1347 1370 0.95

25 28 6.1 8.3e+02 2.3 0.5 1 10 1415 1424 1415 1438 0.86

26 28 0.023 3.1 10.0 0.1 1 20 1476 1495 1476 1498 0.94

27 28 0.084 11 8.2 0.3 1 23 1504 1527 1504 1527 0.94

28 28 1.6 2.1e+02 4.2 0.1 1 19 1532 1550 1532 1553 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	28	0.0072	0.97	11.6	1.9	1	23	190	212	190	212	0.95
2	28	1.5e-05	0.002	20.0	0.5	1	23	225	247	225	247	0.98
3	28	9.1e-05	0.012	17.5	0.2	1	23	260	283	260	283	0.97
4	28	0.00099	0.14	14.3	1.7	2	23	290	312	289	312	0.95
5	28	0.012	1.7	10.8	0.9	1	23	442	465	442	465	0.95
6	28	0.046	6.3	9.0	0.1	3	21	473	491	472	492	0.92
7	28	3.3	4.4e+02	3.2	0.9	1	23	503	525	503	525	0.97
8	28	0.0046	0.63	12.2	0.3	1	23	565	588	565	588	0.95
9	28	0.0055	0.75	11.9	0.1	1	23	599	622	599	622	0.97
10	28	3.1	4.2e+02	3.3	1.8	2	19	629	648	628	653	0.84
11	28	0.22	29	6.9	0.1	2	23	662	684	661	684	0.94
12	28	0.0012	0.16	14.0	1.2	2	23	691	713	690	713	0.94
13	28	0.023	3.1	10.0	4.9	1	23	721	743	721	743	0.96
14	28	0.00089	0.12	14.4	0.3	2	23	810	832	809	832	0.95
15	28	0.43	58	6.0	0.5	2	23	839	860	838	860	0.95
16	28	0.0068	0.92	11.6	3.6	1	21	883	903	883	904	0.94
17	28	0.0019	0.25	13.4	1.9	2	23	926	948	925	948	0.96
18	28	0.00062	0.085	14.9	0.9	2	23	982	1005	981	1005	0.96
19	28	1	1.4e+02	4.8	0.9	1	23	1012	1035	1012	1035	0.96
20	28	0.00024	0.032	16.2	3.2	2	23	1073	1094	1073	1094	0.97
21	28	0.041	5.6	9.2	0.3	1	23	1099	1121	1099	1121	0.94
22	28	0.02	2.7	10.2	0.1	1	23	1211	1234	1211	1234	0.93
23	28	0.11	15	7.8	0.3	3	23	1320	1341	1319	1341	0.96
24	28	0.24	33	6.8	0.5	2	23	1348	1370	1347	1370	0.95
25	28	6.1	8.3e+02	2.3	0.5	1	10	1415	1424	1415	1438	0.86
26	28	0.023	3.1	10.0	0.1	1	20	1476	1495	1476	1498	0.94
27	28	0.084	11	8.2	0.3	1	23	1504	1527	1504	1527	0.94
28	28	1.6	2.1e+02	4.2	0.1	1	19	1532	1550	1532	1553	0.91

Sequence Information

Coding Sequence: ATGGGTGAGGCGATATCCGAAGACAAGTTCGCCAGCCTTTGCAGGCTGTGCGCCACTCACGACATCATAAAAATGGACATCTACGGAGACAAGGGCAGACAGAGAAACCTGTCCGACAAGATATCTACGTGTTTACCGTTCGAGGTGTCTAAGAACGACAGTTTGCCGAAGGCTCTTTGCTACAAGTGTATCTTTCATCTGGAGACTTTCTTTGACTTCAGGCGAGAATGTATTAAAGCCATTTCACTTCTAGAAGATTTCCTCAGGCAGTCTGGCAAAAAGATAACTCCTTGCACAAGAACTGAAGCGCCTTCCCTGAAAATTGAAACCAGTGACCCTAGTTTGGTTGAGAATGAAATGTATTCTGATTGGCCGGGAAGCAAGGAGAGGAGCGTTATGGGAGGGTTCAACAGCCCCGAGTCTCTCAACCCGTCAGATTTTCTAGAAGCTTGTTTGGGAGATTCCTCACCTCAGAGTGTGACTGCGAGCGATACTAACAAGCCGTCAGAGTCCCCTGTACCCGGTGACGGCCCGGACGGAAGTGAGAAGAGCTCAGGCTCCGACGTGTTCAAGTGTAAAGTCTGCTCCAGAGCCTTCGCAAGCCACGCCTCCCTCGTCTTGCACTCTAAATTTCATGGAGATGGGAAGAAGAAGAGTGAAGTGCAAGAGATGTATCCTTGCTATGTGTGTGACAAAGTGTTTGGTTCTAAGAGTCACCTCGCTGTGCATTCCAGGATTCACATGTCAGAGAGCCACCATCTCAAGCAAACCAGACTGTACAGGTGCGAGCTTTGTGCCAAATCGTTTGCTAACTCGAAGCAGCTGTGGATACACGTGTCTACCGTGCACCGGGGCCACCCTCTCGTCACGTGTGACACGTGTCAGAGGATGTTTTCATCTATATCTAACCTTCACGACCACGTCAGGCTCAAGCACAACACTCCTCATCAGTTATCTAAGCAGGCGTTAGCGCAGAAACAGcaGATAAAAGAAGAGATTGTTGATTCTCCTGGAGGTGGAGGATCTGAGAACACGGACGATGACGGCAGAGGAGAGGACAGACCAAGTGTTGACGACGGAACGGCTGGGAGTCGCAGGAAAATGTCCAAACCTAGGAAAATAGAACGAGACTGTGAGTTGGATCCCGAGGGTAACCTGCCCACGTCTCAACATGACCTGGGGGAGTACACCTCGGATGCTATGAAGGAAGAAATCATCCAGGACACTCAACTCTCTGCAGATCCCATAGAGGGTGGAGAGTACGTACACAGTGAGCTGATGGAGTGTGAGTTTGGGGAGAACATGCTGGAGAGCGAGACAGTGTTCTGCTGTGAGATCTGTATCAGAGAGTTCAGCGATAGAGGCTCGCTGTGGCTTCACATGCTCTACACTCACAGAGATGAAGCATCCAAAGCCTGCGGACTCTGTCTCAAGATCTTCAGTCATAACGATGCTCTCATTCAGCACGTAGAGACGTGCAACCCTCGTGGCACTGAGAGGAGGAGgtATAGTTGTACTGTTTGTGCAAGACAGCACGATTCAAGGAAGAAACTAGTTGCTCATGCCAGAATCCACCGGTTAACAGACGAGCAAGGCAACCCTATCGACCCCGAATCCGTTGTTATTCTGAACTCGAGTACTTACAACACTCCTGGAGGCTTCAATCACTCGGCCATCGACGAGGGAGCAGCCTACCAGTGCACAGTCTGTTACAAACCCTTCGAAACCGAGGCCAAGATGATCAAGCACAAGGCATCTGCTCATAGGGAGAGCAAGACTCCAAACCCCTACTACTTTGTGTGTGATATCTGCGGTCTGGCGAGCTCTTCTAGAACTGATAAGTGGAGACACATATCGACTGACCACGCCGGAGACCCGACTGTAACCTGCCCGCAGCCTCAGTGCAACAAGGTGTTCGCAACGGAAGGTTTGAAGAAGGACCACTGTGACAGCCATCACGACATCCAAGGAGTCTACCCGAGTACTTGTGAAGTTTGTGGAAAACTGTGGAACACCAGAGTCGAGTACTGGAAACACATGATGGGAGTCCACCCTGACTTGTTACCCTTAGTCTGCGGGGTCTGTCTCAAGgttttctgtaATTTGAGTGATCTGATTCACCACGTGAGAGACACGCACTACCCTCTGAGTGGGGGCGAGCACTGCTGCGACCTCTGTGGGCGTCCCTATTCTAAACTGTCCAAGATGTCACGCCATCGGAAAATACACTCGACGGTTCCTATACCCGAGGATATCAGAATACTGGTAGAGAACCCTGTGCGGAACGACAGGGCCGAAGGATCTCATTTCATGGATATATCGGGACCCCCGTATACTTGTGAACAGtgcCCGGACATGGAGAATGCTGTGGTCTGTGATTCGTTGGAAGATTTAGGGGCACATCGGCGCGACGTTCACAACTCAGTGCCTTGCGATTTGTGTACCAAGTTCTACTCAACGACATCTCAGCTGTGGAAACACGTGAGCCGGGCCCACAAGGGTCATCCCGAGGTCACGTGTCACGTGTGTAAACGCACTTCGGCCAACCGAGTCATTCTGACAGCGCACGTTGCCAAACATCGAGCTCAGCTTCAAGCCAGGGAGAACTCTGAAGAACCGGATCTACCTGACTCTGAGGATGTGCAGCACGTGTGCTCCAAGTGCAATAAAGTATTCAGGAAAGGTTCGTTGATGCGGAAACATCAGAAGCACTGCAAGGGACCACGTGCCGCTCCGGCCGTGGCCTCGCTGCCTCCCCCCGTCAACGGTATCAGCACGTGTGCCAAGTGCAGCAAGCAGTTCATGTCTCAGAACACGCTTTACAAACACATGAAGAGCGTTCACATCATATACAACTGTGAACTCTGTGAGGATTCCAAACACGACAGTAAAACTTTACTGTACCAACACATACTAGAAGTACACCATGACGATAACAGACTCAAATGTGACTTTGACGGGTGCGACAAGATTCTGAGGACGAACTCAGACATGATGAAGCACCGTCGCACTCACAATCAGCTGCTGACTATCTACGTGTGCAAGTTCTGTGCTGAACTCTTACCCAGCAAGATGAAGATGAGGAAACACATGAAACTCACCCACTCGTCCGACTCCAAGTATCTCTGCTTCATCTGTATGAAGGCCGCTGCCAGTTTCAAGGATCTAGAGGAACACGTGGCAGATAGTCACGGATCTCTTCTAAAGCGTCTGAACACGTGTAAAGTCTGTGGTCGAACGTGTTCCAGCAAATCTAAATTAGTGGATCACATTAAGAACCACAGCCCCGACTTCCATCCTTGTAGATTGTGCTTAAAAATATTCGAATCTCCCGAATTACTTAAGGAACACGTAGACAATCATCCTAAGGAACAAGCtgttgaagaagaagaagtagacgacgaagaagaggaagaaataGAAGagGTGGAATTGGATGAGAGCAGTATCATGGATATAATCGGAGCGAGCACTGGGAAGGGAAGCGTCGGGTCACTTCCTGATTCAGAGAGCGTTGACAGTCCCGACgtagaaacaaacaaaacaaccgATACATCGACCACAGACGACTCCAAACGGAAAACTCATTCTGAAATGGAACACTCTCCGTGCAAGAAGATGAAAGTTGAATTTAGCTGTGTAGCTTGCGATGAAACTTTCGAGTCACGGTCCAGACTTCTTGCACATCAGGAGGAAGAACACGACGATGTCACTTGTAAGAAGTGTGGCATCGTTAGCAGTGACGTCGCCGAACATGATCGGCACAGCAAGAAGTGTGAAGAAGAAGAGGGAAGGGAAGCCAGCCAGATCATCGAAACAATGATGACCCAGgatTCAGTGGGAAGTCCTAGCAGCCCTGAAGATTTTGAAACGACCAACGGTGAAATAATTACCGAGCGTCTGTGCCGGAACAAGAATCCCAGGAAAGTGTACATGGACGACTTGGCGCCCAGTGCCTGTCAGATCTGCGGTAAAGTCTGGCCGGCTAAGAAACATCTGTGGCAGCACTTGATCCGTTTCCACAAGACCGAAGCTTGCAGCACGTGCGGAGTCTGTCTCTCCTGCTTCCCCGATTACAAGTCTCTCAGCGCTCACCTGCTCTCGGAACACCCGTCCAACTACGACGGGGACGGTACTAATCTGACGTGTAGAGTCTGTGGCAAGTATCACAACGCCCGGGCCAAACTACACAGTCACGTATCCATCCACGTCGGCCAAGAAGAACGAGCTTTGGCTCCGTCACACGTGTGTCTCATATGCGACAGAACCTTCCTTCTCTTCAACAAACTGTCGGAACACTTTTTCAACATCCATAAAAAAGAAGCGGAGATGTTGAAGAAAGTAAGAGTTAAAAAAGTGGCCGCGTTACCCGGGAGGAGACGTAGGAGCAACCCCAAGAGAGTCCCCGACGCCAAGTTACCGTTTTACCAGTGCGACATTTGTTCCTTGGTTTTCGCCAGCGAAATCGGACTGACGAATCACAAATGGAGCCATAAGAATTCCGATAATTTCAAATGCGGTCAATGCGGCGAAGTTTTCCTCACCGTCGCCGGGCTGAAGGAACATAAATTCACCAAACACCCGGGAACGGAATTCATCTGCGCGGAGTGTAAATGCGCTTTCGCCACTTACATCGGGTTAGCCGACCATAACAAGGCTTGTTCCGCAAAGCAGAAAACCCTAGAACAAGAGATAGAAGAAGTGGAATCCGAAGACGAAGAAAATTCCGTCAGGACGGTCAAAGAAGACGACGACAAATCGGAAAGTTCTTCTAAGTCGGATTCGGATTCTTCTGATTCTTCCGACTCGTCGGACGATTCGTCCGACAGTGAAGACAGCGACGACAGTGCTGAAGACAACACCGGACAGAAGAAGACAAAACAACAGAGCACCGAGGAGTACACTAAGTGTGCCTTATCTGAGAGCAGCTCTTCAGACGACGAGGAAGAACCTACCAGCGTCACCCTGGCCGAGGGAGACATCGTCGAGATAGTGGAAGTGGATGCCAACGCTCCCTCTACAGAATAA
Protein Sequence: MGEAISEDKFASLCRLCATHDIIKMDIYGDKGRQRNLSDKISTCLPFEVSKNDSLPKALCYKCIFHLETFFDFRRECIKAISLLEDFLRQSGKKITPCTRTEAPSLKIETSDPSLVENEMYSDWPGSKERSVMGGFNSPESLNPSDFLEACLGDSSPQSVTASDTNKPSESPVPGDGPDGSEKSSGSDVFKCKVCSRAFASHASLVLHSKFHGDGKKKSEVQEMYPCYVCDKVFGSKSHLAVHSRIHMSESHHLKQTRLYRCELCAKSFANSKQLWIHVSTVHRGHPLVTCDTCQRMFSSISNLHDHVRLKHNTPHQLSKQALAQKQQIKEEIVDSPGGGGSENTDDDGRGEDRPSVDDGTAGSRRKMSKPRKIERDCELDPEGNLPTSQHDLGEYTSDAMKEEIIQDTQLSADPIEGGEYVHSELMECEFGENMLESETVFCCEICIREFSDRGSLWLHMLYTHRDEASKACGLCLKIFSHNDALIQHVETCNPRGTERRRYSCTVCARQHDSRKKLVAHARIHRLTDEQGNPIDPESVVILNSSTYNTPGGFNHSAIDEGAAYQCTVCYKPFETEAKMIKHKASAHRESKTPNPYYFVCDICGLASSSRTDKWRHISTDHAGDPTVTCPQPQCNKVFATEGLKKDHCDSHHDIQGVYPSTCEVCGKLWNTRVEYWKHMMGVHPDLLPLVCGVCLKVFCNLSDLIHHVRDTHYPLSGGEHCCDLCGRPYSKLSKMSRHRKIHSTVPIPEDIRILVENPVRNDRAEGSHFMDISGPPYTCEQCPDMENAVVCDSLEDLGAHRRDVHNSVPCDLCTKFYSTTSQLWKHVSRAHKGHPEVTCHVCKRTSANRVILTAHVAKHRAQLQARENSEEPDLPDSEDVQHVCSKCNKVFRKGSLMRKHQKHCKGPRAAPAVASLPPPVNGISTCAKCSKQFMSQNTLYKHMKSVHIIYNCELCEDSKHDSKTLLYQHILEVHHDDNRLKCDFDGCDKILRTNSDMMKHRRTHNQLLTIYVCKFCAELLPSKMKMRKHMKLTHSSDSKYLCFICMKAAASFKDLEEHVADSHGSLLKRLNTCKVCGRTCSSKSKLVDHIKNHSPDFHPCRLCLKIFESPELLKEHVDNHPKEQAVEEEEVDDEEEEEIEEVELDESSIMDIIGASTGKGSVGSLPDSESVDSPDVETNKTTDTSTTDDSKRKTHSEMEHSPCKKMKVEFSCVACDETFESRSRLLAHQEEEHDDVTCKKCGIVSSDVAEHDRHSKKCEEEEGREASQIIETMMTQDSVGSPSSPEDFETTNGEIITERLCRNKNPRKVYMDDLAPSACQICGKVWPAKKHLWQHLIRFHKTEACSTCGVCLSCFPDYKSLSAHLLSEHPSNYDGDGTNLTCRVCGKYHNARAKLHSHVSIHVGQEERALAPSHVCLICDRTFLLFNKLSEHFFNIHKKEAEMLKKVRVKKVAALPGRRRRSNPKRVPDAKLPFYQCDICSLVFASEIGLTNHKWSHKNSDNFKCGQCGEVFLTVAGLKEHKFTKHPGTEFICAECKCAFATYIGLADHNKACSAKQKTLEQEIEEVESEDEENSVRTVKEDDDKSESSSKSDSDSSDSSDSSDDSSDSEDSDDSAEDNTGQKKTKQQSTEEYTKCALSESSSSDDEEEPTSVTLAEGDIVEIVEVDANAPSTE*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00743963;
90% Identity: iTF_00743963;
80% Identity: -