Gbue019558.1
Basic Information
- Insect
- Gerris buenoi
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_001010745.2
- Location
- KZ651501.1:160892-176306[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-81 4.8e-77 260.8 20.9 61 300 38 274 7 274 0.90 2 2 0.029 8e+02 0.7 4.8 120 167 293 340 277 347 0.62
Sequence Information
- Coding Sequence
- ATGAAAGACCAGCATGTCGCTCTGTATGAAAGAGACAACATGAACTCTTCAGATGGAGGAGGCAGCAGGAGCAGTGGAGTCGGGATCGCAGGTAGAATCAACTCGGCACCGAGACTCAATAGTTACCAGTCTTCCAGGAGATCCAGCGAGGACTCCCTCGAAGAGTCCAGCTCCCTTAGAGATGTCAGGAATGAGTTGAGAGAAGTAGAAGATAAGTTCAGGAAGGCTATGATAGGGAATGCCCAGCTGGATAACGAGAAGACCGCTGCTATCTACCAGGTGGAACTCTACAAGGACCGCTATGAGGAGATGGAAGAATCTTACGCACAGCTTCAGAGGGAGCACAGAGAGAAGTGCCGAGAGCTAGACCAGTTGAAGAGAGATtcagaaaaactaaataaagaacttCACTACACCAGGGCTGCCCTCGAGGAGCGGGACAGGCTCATACAGGAGCAAGGGCTGGTGATAGTTGGTGGTGATACATCATCGTCAGAGTCTTGTGGTGAGGACGATGAAGACGACGGCAAGGAAAGAACACCTCGTAAAGAGAAGCACAAGAGAGCCCTAGTATCGGCAGACATGGCCAACCTATTAGACACCGCTGGCAAAGGATCACTagATGTAAGATTGAAGAGGCTGGCGTCTGAACGGAACGATCTGTCAGACGAGCTGAGGCATGTCAAGCTAGAGCTGGAGGAGGAGCGAGCCAAACTCAGATCTTGCAACTCAGCCGATATGGAGGAGTTACAGCAAGAAGTTAGTAAGCAGATAGGAGACTACAAGTTCAAACTACAGAAAGCTGAGCAGGACATCTCCACACTACAAACCACTGTGACAAGGCTGGAGAGTCAGGTGGCCCGGTACAAGACTTCTACCGAAACCCTCGAGAAATCTGAAGAAACGCTCAAAGTCGAAAGAAGAAAACTTCTCAGAGAGCTGAGGGAGAGCCAGGCGAGGGTGGAAGAGTTGGAAACGGCTCACACTCATCTACAGAAGAGACTGGATAAACTCAAGAACGCTAAATCTGCCTTACTCAAGGACTTGTAG
- Protein Sequence
- MKDQHVALYERDNMNSSDGGGSRSSGVGIAGRINSAPRLNSYQSSRRSSEDSLEESSSLRDVRNELREVEDKFRKAMIGNAQLDNEKTAAIYQVELYKDRYEEMEESYAQLQREHREKCRELDQLKRDSEKLNKELHYTRAALEERDRLIQEQGLVIVGGDTSSSESCGEDDEDDGKERTPRKEKHKRALVSADMANLLDTAGKGSLDVRLKRLASERNDLSDELRHVKLELEEERAKLRSCNSADMEELQQEVSKQIGDYKFKLQKAEQDISTLQTTVTRLESQVARYKTSTETLEKSEETLKVERRKLLRELRESQARVEELETAHTHLQKRLDKLKNAKSALLKDL*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00743741;
- 90% Identity
- iTF_00743741;
- 80% Identity
- -