Gbue004714.1
Basic Information
- Insect
- Gerris buenoi
- Gene Symbol
- TFIP11
- Assembly
- GCA_001010745.2
- Location
- KZ651069.1:475840-478239[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.1e-32 1.5e-27 98.5 3.2 176 275 3 101 1 101 0.98 2 2 0.069 1.3e+03 0.3 0.0 156 190 112 145 106 151 0.79
Sequence Information
- Coding Sequence
- ATGAGTATATTCCCAGTTATCAGACAAAAGTTAGGTCATGCTCTCAGTGGTTGGTACCCTTCTGACAGCTCTGCAAGATTCATGCTCCTGCCTTGGCTTAATGTTTTCTCTCGCCAGGATATGGAACAGTTTCTTATTGCACATATCTTACCCAAACTTGCTCTCTGTATTCAGgaaATCAATCCTCAAGAGCAGAATACTGAATCATGGAACTGGGTGATATCTTGGCTACCACTTCTGGGAGAGACACTTCTAGCTGAACTTTTAGACAAATCCTTCTTCCCCAAGTGGCTTCAGGCTCTCACTCTGTGGCTCAACATGGCCCCTAACTATGAACAGATTTCCAACTGGTACACAGGGTGGAAACAACTCATTCCTGAATCACTTAAAGACAATCCTAAGATTAAAGgtcATTTAAGGAATGCTTTGGAGTTAATGTCACGATCGGTTGGAGGTCCTCAGCCACCTCAACCTCCTCCTCCACCTGAGATAACTTCACATCCAAGATATCAGggTATGGCTGAATCAGTTCGAACTGCTAACCAAATGGTTGAAGGGTTCAAGGATCTGATATTGAAGCGTTGTGAAGAGAGAGGTATTTTATTCATGCCTCTACCTAACCGCTACAGAGAAGGCAAACAAGTGTACCGCTGCGGAGCTGTTCAGATATACTTAGATAGAAATGTTATCTTCTACTTGGATCACAACAATATGTGGCAGCCTACATCTTTACCTATTCTTCTAGAGAAAGCTGCACCTTTATAA
- Protein Sequence
- MSIFPVIRQKLGHALSGWYPSDSSARFMLLPWLNVFSRQDMEQFLIAHILPKLALCIQEINPQEQNTESWNWVISWLPLLGETLLAELLDKSFFPKWLQALTLWLNMAPNYEQISNWYTGWKQLIPESLKDNPKIKGHLRNALELMSRSVGGPQPPQPPPPPEITSHPRYQGMAESVRTANQMVEGFKDLILKRCEERGILFMPLPNRYREGKQVYRCGAVQIYLDRNVIFYLDHNNMWQPTSLPILLEKAAPL*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -