Basic Information

Insect: Gerris buenoi
Gene Symbol: -
Assembly: GCA_001010745.2
Location: KZ652236.1:185383-188469[-]

Transcription Factor Domain

TF Family: IRF
Domain: IRF domain
PFAM: PF00605
TF Group: Helix-turn-helix
Description: This family of transcription factors are important in the regulation of interferons in response to infection by virus and in the regulation of interferon-inducible genes. Three of the five conserved tryptophan residues bind to DNA.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.015 8.2e+02 1.9 0.0 67 91 12 36 5 46 0.78

2 19 0.046 2.5e+03 0.4 0.0 71 91 48 68 43 78 0.80

3 19 0.044 2.4e+03 0.4 0.0 71 91 80 100 73 110 0.81

4 19 0.045 2.5e+03 0.4 0.0 71 91 112 132 106 142 0.81

5 19 0.042 2.3e+03 0.5 0.0 71 91 144 164 133 174 0.82

6 19 0.046 2.5e+03 0.4 0.0 71 91 176 196 171 206 0.80

7 19 0.044 2.4e+03 0.4 0.0 71 91 208 228 201 238 0.81

8 19 0.042 2.3e+03 0.5 0.0 71 91 240 260 228 270 0.82

9 19 0.044 2.4e+03 0.4 0.0 71 91 272 292 265 302 0.81

10 19 0.047 2.6e+03 0.3 0.0 71 91 304 324 300 334 0.80

11 19 0.044 2.4e+03 0.4 0.0 71 91 336 356 329 366 0.81

12 19 0.044 2.4e+03 0.4 0.0 71 91 368 388 361 398 0.81

13 19 0.045 2.5e+03 0.4 0.0 71 91 400 420 394 430 0.81

14 19 0.047 2.6e+03 0.3 0.0 71 91 432 452 428 462 0.80

15 19 0.041 2.3e+03 0.5 0.0 71 91 464 484 450 494 0.83

16 19 0.044 2.4e+03 0.4 0.0 71 91 496 516 489 526 0.81

17 19 0.051 2.8e+03 0.2 0.0 71 91 528 548 526 558 0.79

18 19 0.31 1.7e+04 -2.3 0.0 71 87 560 576 559 581 0.87

19 19 0.0088 4.8e+02 2.7 0.0 71 100 592 618 583 620 0.80

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.015	8.2e+02	1.9	67	91	12	36	5	46	0.78
2	19	0.046	2.5e+03	0.4	71	91	48	68	43	78	0.80
3	19	0.044	2.4e+03	0.4	71	91	80	100	73	110	0.81
4	19	0.045	2.5e+03	0.4	71	91	112	132	106	142	0.81
5	19	0.042	2.3e+03	0.5	71	91	144	164	133	174	0.82
6	19	0.046	2.5e+03	0.4	71	91	176	196	171	206	0.80
7	19	0.044	2.4e+03	0.4	71	91	208	228	201	238	0.81
8	19	0.042	2.3e+03	0.5	71	91	240	260	228	270	0.82
9	19	0.044	2.4e+03	0.4	71	91	272	292	265	302	0.81
10	19	0.047	2.6e+03	0.3	71	91	304	324	300	334	0.80
11	19	0.044	2.4e+03	0.4	71	91	336	356	329	366	0.81
12	19	0.044	2.4e+03	0.4	71	91	368	388	361	398	0.81
13	19	0.045	2.5e+03	0.4	71	91	400	420	394	430	0.81
14	19	0.047	2.6e+03	0.3	71	91	432	452	428	462	0.80
15	19	0.041	2.3e+03	0.5	71	91	464	484	450	494	0.83
16	19	0.044	2.4e+03	0.4	71	91	496	516	489	526	0.81
17	19	0.051	2.8e+03	0.2	71	91	528	548	526	558	0.79
18	19	0.31	1.7e+04	-2.3	71	87	560	576	559	581	0.87
19	19	0.0088	4.8e+02	2.7	71	100	592	618	583	620	0.80

Sequence Information

Coding Sequence: ATGAGACTGTTGTTTTCTGACAAGTGTTTAAGTTCTTCAACAGGAAAGGCTGGATTAAGATGTATAGTTTCTAGTCTAACACCGCTGAAAGAAGTAGAATCCCTAAGGAGCTGCTATTACCAAGTATACTATCTGTTAGGAAAGGCTGGATTAAGATGTATAGTTTCTAGTCTAACACCGCTGAAAGAAGTAGAATCCCTAAGGAGCTGCTATTACCAAGTATACTATCTGTTAGGAAAGGCTGGATTAAGATGTATAGTTTCTAGTCTAACACCGCTGAAAGAAGTAGAATCCCTAAGGAGCTGCTATTACCAAGTATACTATCTGTTAGGAAAGGCTGGATTAAGATGTATAGTTTCTAGTCTAACACCGCTGAAAGAAGTAGAATCCCTAAGGAGCTGCTATTACCAAGTATACTATCTGTTAGGAAAGGCTGGATTAAGATGTATAGTTTCTAGTCTAACACCGCTGAAAGAAGTAGAATCCCTAAGGAGCTGCTATTACCAAGTATACTATCTGTTAGGAAAGGCTGGATTAAGATGTATAGTTTCTAGTCTAACACCGCTGAAAGAAGTAGAATCCCTAAGGAGCTGCTATTACCAAGTATACTATCTGTTAGGAAAGGCTGGATTAAGATGTATAGTTTCTAGTCTAACACCGCTGAAAGAAGTAGAATCCCTAAGGAGCTGCTATTACCAAGTATACTATCTGTTAGGAAAGGCTGGATTAAGATGTATAGTTTCTAGTCTAACACCGCTGAAAGAAGTAGAATCCCTAAGGAGCTGCTATTACCAAGTATACTATCTGTTAGGAAAGGCTGGATTAAGATGTATAGTTTCTAGTCTAACACCGCTGAAAGAAGTAGAATCCCTAAGGAGCTGCTATTACCAAGTATACTATCTGTTAGGAAAGGCTGGATTAAGATGTATAGTTTCTAGTCTAACACCGCTGAAAGAAGTAGAATCCCTAAGGAGCTGCTATTACCAAGTATACTATCTGTTAGGAAAGGCTGGATTAAGATGTATAGTTTCTAGTCTAACACCGCTGAAAGAAGTAGAATCCCTAAGGAGCTGCTATTACCAAGTATACTATCTGTTAGGAAAGGCTGGATTAAGATGTATAGTTTCTAGTCTAACACCGCTGAAAGAAGTAGAATCCCTAAGGAGCTGCTATTACCAAGTATACTATCTGTTAGGAAAGGCTGGATTAAGATGTATAGTTTCTAGTCTAACACCGCTGAAAGAAGTAGAATCCCTAAGGAGCTGCTATTACCAAGTATACTATCTGTTAGGAAAGGCTGGATTAAGATGTATAGTTTCTAGTCTAACACCGCTGAAAGAAGTAGAATCCCTAAGGAGCTGCTATTACCAAGTATACTATCTGTTAGGAAAGGCTGGATTAAGATGTATAGTTTCTAGTCTAACACCGCTGAAAGAAGTAGAATCCCTAAGGAGCTGCTATTACCAAGTATACTATCTGTTAGGAAAGGCTGGATTAAGATGTATAGTTTCTAGTCTAACACCGCTGAAAGAAGTAGAATCCCTAAGGAGCTGCTATTACCAAGTATACTATCTGTTAGGAAAGGCTGGATTAAGATGTATAGTTTCTAGTCTAACACCGCTGAAAGAAGTAGAATCCCTAAGGAGCTGCTATTACCAAGTATACTATCTGTTAGGAAAGGCTGGATTAAGATGTATAGTTTCTAGTCTAACACCGCTGAAAGAAGTAGGATCTCTAAGGTTCTACTATTATCAAGTATACTATCTGTTAGGAAAGGCTGGATTAAGATGTATAGTTTCTAGTCTAACAACGCTGAAAGAAGTAGAATCCCTAAGGAGCTGCAAGCATTATCAAGTATATTAa
Protein Sequence: MRLLFSDKCLSSSTGKAGLRCIVSSLTPLKEVESLRSCYYQVYYLLGKAGLRCIVSSLTPLKEVESLRSCYYQVYYLLGKAGLRCIVSSLTPLKEVESLRSCYYQVYYLLGKAGLRCIVSSLTPLKEVESLRSCYYQVYYLLGKAGLRCIVSSLTPLKEVESLRSCYYQVYYLLGKAGLRCIVSSLTPLKEVESLRSCYYQVYYLLGKAGLRCIVSSLTPLKEVESLRSCYYQVYYLLGKAGLRCIVSSLTPLKEVESLRSCYYQVYYLLGKAGLRCIVSSLTPLKEVESLRSCYYQVYYLLGKAGLRCIVSSLTPLKEVESLRSCYYQVYYLLGKAGLRCIVSSLTPLKEVESLRSCYYQVYYLLGKAGLRCIVSSLTPLKEVESLRSCYYQVYYLLGKAGLRCIVSSLTPLKEVESLRSCYYQVYYLLGKAGLRCIVSSLTPLKEVESLRSCYYQVYYLLGKAGLRCIVSSLTPLKEVESLRSCYYQVYYLLGKAGLRCIVSSLTPLKEVESLRSCYYQVYYLLGKAGLRCIVSSLTPLKEVESLRSCYYQVYYLLGKAGLRCIVSSLTPLKEVGSLRFYYYQVYYLLGKAGLRCIVSSLTTLKEVESLRSCKHYQVY*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -