Gang018218.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Germaria angustata
Gene Symbol
Hr39
Assembly
GCA_963681545.1
Location
OY812999.1:99479050-99485141[-]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.26 5.9e+03 -2.4 9.1 73 166 278 390 241 431 0.58
2 3 1.3e-16 3e-12 48.0 12.4 1 156 506 701 506 711 0.75
3 3 8e-80 1.8e-75 256.2 0.3 185 408 695 906 691 906 0.95

Sequence Information

Coding Sequence
atgtctACCATTAAAACTGAAAATGTGACAGGAGGAACGGTGGTCACTACAACAACATCCGGAGGAACTTCCTTTCAGTTGCCCATAAATATGAGCAATGCAGCTGGAGCAATAGGAGGGATAGTGGGAGCATCAGAAAGTGGTAGTAGCTGTATGACTACAACTACTTGTACAACTACCACTACCAGGAATAATATTTCTGTGACAAATATCAAATGTGAAGTGGATGATGGTGTCAATTCTTCATCTTCAACGAATGGCAATATTGTTTCGGTGGGATTTTATAATGGTTCTAGAGGCATAAGTGGGACAAGTGTAATAACTGCCGGTCATGGCATACGAATACCGGTGACCAAAGTAGAGGACTCGGATTCAGAAACGGAATTGacgaatattgaaaatttaaaagttaccCGACGAGTGGCTAGTTCTGCTTCAAGCACCACAAATAATCATCACAACGGTCCGCGACCTATGTCGTGGGAAGGAGAATTATCTGAAAATGAAGATACCCGGGAGGCAGAATTAATGGACACGGACACAACTATGAGCAATGGTGGCATGCAGGAACCCTCAAATGCTGTGGCTGTTATAAAAAGCGAAGCTACAACCACTACACCTTCTATACCGGCTGGTGGAGAGCATTTAATCAAAACAGACACAGAACAATTAATGTTAGATGTTCATCAAGCGGCAACTGGCTGTGGTCTTTATCATCCGAAACTAAAGTTGGTACCCACCCAAAGTGATcccattaatttgaaatttgagcCACCCGATCATTCCGTTTTAGTTAATTCGCCTTTATTGGCGCGCCAAAAGTCTACCACTGCTTTGCCTCATTTACCTGCCAACCCTAGCCCAGATTCTGCCATACATTCCGTTTACACACACAGCTCACCTTCTCAATCGCCCTTGACATCAAGACATGCTCCGTACACCCCTTCTCTGTCGCGCAATAATAGTGATGCTTCTCATAGCTCTTGCTATTCCTATTCCTCTGAATTCAGCCCCACTCATTCACCCATACAAGGCCGGCACCCAGCGTCTCATGCTGTCTATGGCAGCTTTAATGGCGCTACGGCCAACACCTTACCACATTCCGCTTTGCTCTACAGGCCCATGATGAGTTCGGTTCAAACTGGACAATCAGCCAAACTGGATGCAACAGCTTCAGCAGGAGAAGTGCAAAATTTATCTATGGATGCTACTTCATCATCTTCGAGCTTCAATATGGCTAGCGACTCTTCAGGCTTACCTGCCTCTCCAGCCGCTGGCATATCCCGCCAACAGCTAATAAACTCGCCCTGCCCCATATGCGGTGATAAAATATCCGGCTTCCATTATGGCATTTTTTCATGCGAGTCCTGCAAAGGTTTTTTTAAGCGCACCGTCCAAAAtcgcaaaaattatgtttgcgTACGGGGCGGACCCTGTGCAGTCAGCAttactacccgcaaaaaatgTCCAGCCTGTAGATTTGATAAATGCTTGCAGAAAGGCATGAAACTTGAAGCAATAAGAGAAGATCGCACCCGTGGAGGCCGTTCTACTTATCAATGCTCTTATACTCTACCCAATTCCATAATGAGTCCTTTGCTTTCGCCcgaacagcagcaacaacagaaCTCTGCACAAAATCTAGTGGCCAGTCAACAACATTCACAACTACAACACCAGCTGCAGCAGCGTTTAAATCCTTCCCTACAATCGCCACATCATTCAAATGGTTATGGTTCACAAAACTCTAATCCagcaacaactacaattaaAACCGAACAGGGTGATCCATATGGGAAGAATGTGCCAAGTGCCCATTCACCATCATTGAACGGCCTAAATATATCCTCGTCACATTCACATTCTCATTCGCATGtatcaaatatttctaatagcACTTCCTCCTCCTGCAATTCACTGCATCGCAACAGTATTCCCCAACTTCTGCAAGAAATTATGGATGTTGAACATCTCTGGCAATACACAGATGCCGAGCTGGCACGACTCAATCAACCCTTGACAACGTCCTCCAGCTCCACTTCTCTAAATTCCAATTCAACAGACTCTTCCGCAGCTGCCAATCAAATGACCAATCCACTGCTGGCCAGTGCTGGTCTCTCCTCCAGCACCAATCCCGATTTGATAGCCCATCTATGCAAAGTGGCCGACCATCGTTTATACAAGATTGTAAAGTGGTGCAAGAGCTtgcctttatttaaaaacatatcgATTGACGATCAAATATGCCTACTCATTAACTCTTGGTGTGAACTTTTACTTTTCTCCTGTTGCTATCGGTCCATCGATACACCGGGAGAAATTAAAATGTCTCTGGGTAAAACAATAACACTGCCACAAGCGAAACTTACTGGTTTTCAGccCTGCATTGAAAGAATGCTGAATCTGACAGATCATTTAAGACGTTTACGTGTTGATCGTTACGAATATGTTGCTATGAAGGTTATTGTCCTGCTGCAATCAGatacaTCGGAATTGCAAGAACCTGTTAAGGTTAGAGAATGTCAGGAGAAGGCTTTGCAAAGTTTGCAAGCCTATACATTGGCCCACTATCCAGATTGTCCATCCAAATTTGGTGAGCTATTGCTACGCATACCAGATTTACAGAGAACGTGTCAGttggGCAAAGAAATGCTGTCTATTAAATCCCGTGATGGTGGTGACTTTAACTTATTAATGGAGCTTTTAAGAGGAGAACATTGA
Protein Sequence
MSTIKTENVTGGTVVTTTTSGGTSFQLPINMSNAAGAIGGIVGASESGSSCMTTTTCTTTTTRNNISVTNIKCEVDDGVNSSSSTNGNIVSVGFYNGSRGISGTSVITAGHGIRIPVTKVEDSDSETELTNIENLKVTRRVASSASSTTNNHHNGPRPMSWEGELSENEDTREAELMDTDTTMSNGGMQEPSNAVAVIKSEATTTTPSIPAGGEHLIKTDTEQLMLDVHQAATGCGLYHPKLKLVPTQSDPINLKFEPPDHSVLVNSPLLARQKSTTALPHLPANPSPDSAIHSVYTHSSPSQSPLTSRHAPYTPSLSRNNSDASHSSCYSYSSEFSPTHSPIQGRHPASHAVYGSFNGATANTLPHSALLYRPMMSSVQTGQSAKLDATASAGEVQNLSMDATSSSSSFNMASDSSGLPASPAAGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCVRGGPCAVSITTRKKCPACRFDKCLQKGMKLEAIREDRTRGGRSTYQCSYTLPNSIMSPLLSPEQQQQQNSAQNLVASQQHSQLQHQLQQRLNPSLQSPHHSNGYGSQNSNPATTTIKTEQGDPYGKNVPSAHSPSLNGLNISSSHSHSHSHVSNISNSTSSSCNSLHRNSIPQLLQEIMDVEHLWQYTDAELARLNQPLTTSSSSTSLNSNSTDSSAAANQMTNPLLASAGLSSSTNPDLIAHLCKVADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCYRSIDTPGEIKMSLGKTITLPQAKLTGFQPCIERMLNLTDHLRRLRVDRYEYVAMKVIVLLQSDTSELQEPVKVRECQEKALQSLQAYTLAHYPDCPSKFGELLLRIPDLQRTCQLGKEMLSIKSRDGGDFNLLMELLRGEH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01259264;
90% Identity
iTF_00760170;
80% Identity
iTF_00741941;