Gang019450.2
Basic Information
- Insect
- Germaria angustata
- Gene Symbol
- bab1
- Assembly
- GCA_963681545.1
- Location
- OY813000.1:7924520-7926281[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.5e-17 5.1e-14 53.0 0.0 1 43 55 98 55 100 0.95 2 2 7.9 8.9e+03 -2.2 0.3 3 13 192 202 190 209 0.78
Sequence Information
- Coding Sequence
- ATGTTGGAAAATTCTCACGCATGGATGGGAGCATCAGGCTCATCAATAGCAGCAGACAGTTATCAGTATCAGCTGCAGTCGATGTGGCAAAAATGTTGGAATACAAATCAAAGTTTAATGCATCACTTGCGATTTCGTGAACGTGGTCCTTTAAAATCATGGCGTCCGGAGACCATGGCCGAAGCAATTTTTAGTGTGCTTAAAGAGGGTCTGTCACTTTCGCAGGCAGCGAGGAAATATGACATACCATATCCCACATTTGTGCTGTACGCCAATCGGGTGCACAATATGCTGGGGCCTTCCATTGATGGCGGTCCGGACTTAAGGCCGAAGGGCAGAGGTCGACCACAGCGCATTCTGTTGGGAATCTGGCCCGATGAACATATCAAAGGTGTCATAAAAACAGTTGTCTTCCGTGATGCCAAAGATTTGAAGGAGGAGGGTCTGGCCCCTATGCCTTATGGAAGGCATTCGcCCGTTTTTCCATTTCAGGAAGGACCACTCAGCTATCCTGGAGTTGCTGGTCCCTGTCCCAATGGAATGCCTAGTGGCGCCGGCGATCAGATGTCGCAAGAAGCAACTGCCGCAGCAGTAGCAGCAGTTGCTCACAATATACGTCAACAAATGCAAATGGCGGCAGCAGTCCAGCAGCAACAACAGATCGGCGAGGGTCATGGCGGtccaaacatttttaatcttCCACCTCACATGGCCAGTGGTGGACCAATGGTAGGACCTCCTGGCGCTGGAGGTGTGCCTCTACCTAAAGCTAGTATTTCTCCAGCTCTTAGTTCATCTTCAAACACTGCTGGCATCAGTTCGATCATGGGACCCAGACATGTTCCATCACCATGTGGGCCCACTTTGCCCGGAATGCCCCAATTGCCTCCTAGCATGGCTGTGGCATTGCACATGGCTAATAGTGGTCCCGGTAGTCGCTGTGACCCGAGTGCCGTTTTAAGtcaacagcagcaacatcagCTCCAGCACTTACATTTACAACAGCAACATGCCCTACAccaccagcagcagcagcagcagaaacaccaacaacagcaacaccaAATAGCTTTTGGGTCACACACCTCTTCACTAGGCCATTCATCTGTTATGGGCACTCCTTCTCATACGCTTGTCCATCAAACCCTACAAAAAACAACGACGGCAGCCTCAACAAAACCGCCTTCCTCCACATCATCGCCCTCTAGGCGTAACAGCCCTCACAGTCTAACGCCATTGCACTCTCCCCTTACAGAGCTTGGACTAGAAATGACTTTTAAGCCATCCCGCCCATTTTCACCCTCCCGTCTGTTTTCTGATGACATTTCCGATATTGTAGGCATTGCAGCCTCCCCCTTGCGCTCGCCGTCAACTTCTCATCCGCAGTCTTCTACAGCGGCAGTAACAACAGCAACGATAACAACCACTAGCAGTATTAATACAGCCCCCGTCAGAGCATCTTCCTCAGAGGCATCATCAGCCTCTGCTACATCacatgcaacaacaacaatagcagcaACAGCAGGAGCCATTGATAGTTCAGCAGCCACCACAAGCAACATAAGTTCCACGGGCATAAAACTCGAACCCATTACGACAACTAGCGATTAA
- Protein Sequence
- MLENSHAWMGASGSSIAADSYQYQLQSMWQKCWNTNQSLMHHLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGPDLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFRDAKDLKEEGLAPMPYGRHSPVFPFQEGPLSYPGVAGPCPNGMPSGAGDQMSQEATAAAVAAVAHNIRQQMQMAAAVQQQQQIGEGHGGPNIFNLPPHMASGGPMVGPPGAGGVPLPKASISPALSSSSNTAGISSIMGPRHVPSPCGPTLPGMPQLPPSMAVALHMANSGPGSRCDPSAVLSQQQQHQLQHLHLQQQHALHHQQQQQQKHQQQQHQIAFGSHTSSLGHSSVMGTPSHTLVHQTLQKTTTAASTKPPSSTSSPSRRNSPHSLTPLHSPLTELGLEMTFKPSRPFSPSRLFSDDISDIVGIAASPLRSPSTSHPQSSTAAVTTATITTTSSINTAPVRASSSEASSASATSHATTTIAATAGAIDSSAATTSNISSTGIKLEPITTTSD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00921367;
- 90% Identity
- iTF_00760016; iTF_00900506; iTF_01137921; iTF_00899463;
- 80% Identity
- -