Gang008367.1
Basic Information
- Insect
- Germaria angustata
- Gene Symbol
- Rel
- Assembly
- GCA_963681545.1
- Location
- OY812998.1:112295681-112299953[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.77 8.6e+03 -2.2 0.0 35 67 83 115 77 140 0.76 2 2 5e-52 5.6e-48 164.4 1.0 1 168 147 325 147 326 0.93
Sequence Information
- Coding Sequence
- ATGGATAACATGATGCCACATTTGAGCGTCACGAACGAAAAGGACATTACCGATTTGGATACACTAGAGCGAATACGGAGTGTTAGTGAATCTTCTGTCGGTGGCACCAGTGGCTATAACAGCACGACTTCCCCAGGAGCAGGTAATTCTCCAATTGCAAGCGGATATTCTCCCGTACAATCCCCGGATTCTGTTCTGCAAACGGAATTTTCGCAGTTGCTCATTCCACCAGAATTATCTTACCAACAAAACTCGTTGCAATACGTGCAACTGCATAATGTTGATATGAATGTCAATAACAGCCAGTCAATGTTTTACCAACATAATAACTTTTCGCCTCATTTAAACGCTGAGAATGTTTTAAACAATCAAAGTCAACAACAGTCTGCATATATTACTATGGCTTATGCTGAGGTCAAATATGAATACGAAGCAACTTTGCGTATAACGGAGCAGCCGGTGGAAAAATTTCGTTTTCGCTACAAGTCTGAAATGCATGGCACACATGGCTCGTTAAATGGCACAAACTCACAAAGAAGTACTAAAACCTTTCCCGAAGTTCAATTGTGTGGTTACAAAGGACCGGCTATCATACGCTGCAGTCTATTTCAAACTAATCTTGAAAGTCCCCATTCACATCAGCTGGTAGTGCGCAAAGATGACCATGATATTTGCGATCCGCATGAGTTGGAAGTTTCTCAGGAAGTGGGCTATTATgccgaatttaaaaatatgggtGTTATACATACAGCTAAAAAATTCATTGTCGAggaattgttaaaaaagaagCGGAAACGGTTAGGTCGTgattttttgacaataaaagAAGACCAGGATTTATGTAAGCAAACAGAAAAGGAAGCAAAGGATATGAACTTAAATCAgGTGCGTTTGTGTTTCGAAGCATTTCGCATTGAAGAAAACAAGTCGTACACACCTATAGCTCGTCCTGTATATTCGAATCCTATTAACAATCGTAAGTCAGCTCAGACTGGGGAACTACGTATTGTACGGTTAAGTATAGCAACGGGGAATGTGTGCGGCAACGATGATCTAATGTTACTTGTGGAAAAAGTAagcaaaaagaatataaaagtaaGATTTTATGAAATGGTCGAAGATGAACAAATATGGGAGGCTTTTGCCTCCTTTCGCGAATCCGATGTCCATCATCAATATGCTATTGTGTGCAGAACACCACCATATAAAGATAAAGATATTGACAAAGCTGTCGAAGTATTTATTGAACTCGTTAGGCCCTCAGACGACGAGCGTAGTTATCCACCAGTATCATTCCGATATAAGCCAAGTTATGCAGTAATATCACGTAAAAGAAGACGAACATGCTCTTCTTTTAATAGCGTATCTTGTAGCAATTCTGGATCGTTAAGTTCGGGAGAAATACCTAAAACAGTCCAAGAACAACAGAATTCAATGAATATTGAATGTGCTTCAGCTGAacttaaatcaatattaaataacactGACTTTAATAAGTCAGATATATCACTCGACTCAAACTTATTAGCCTATTTGGACGATAACGATCCAAAATTTACGGATTTGGATGAAATGCTAAATAACACAGAAGGGGAGAGATTTGCTACTCCCATTGAAAAAGATGGCGTTTGTGTTGGCAGCGAAGCAAAGAAATCTTTGTATCattataaaaagcaaatgatTAGTAAGAAACAGATGGATATCGCCAAACAAGCTGTACAGTCTCAGCAGCCTAATCTGTATTTACGgcgtattttaaatatatttcaagatACCATCAGATCTGCAACACCACTGAACTCAACAAGACTGAGTAGTGCAGCAGAACAAATTACTAAAATCATTAATCAACATTCAGAGAAATATGGTGATTCTCTAATACATGAAATCGTAGTATCGAATAATAAACTTGCTATACCGATTTTCAAAGTACTAAactactttaaattaaatgatcTTTTAAATACATTGTTGAATAAACAGTCACAAACTGCGTTACACTATGCCTGCCTTCATAGTCAGCCGAACTACATACGACCCCTTTTAAAATTGGGATGCAACCCCGATATCCAGGATGCCGAAGGCAATACGGCGCTGCATATTGCGGTAGTTGAAAAAGATATCAAATGCGtggaaagttttattaattcgGAAATATCTTTGAACTTGAACCTATTAAATGATGATGGATTTACGCCCTTACATTTAGCCATACGTGATAACAATTACGATATTGTGGCAAAGTTATTAAAAGTTTATGCAATCTCAGTAGCTACGCCAAGTAGGAAAGATGGCAGTACCGCTTTACACATGgctatacaacaacaaaatctgaaattagtaaaattaatattagcaAATGAACAGTTAATAGCTTCTGCGTTATATGCAACCAATAGGGCTGGTTATACTCCACTAGATTTGGCCAAACAACTGGTCCCAAGCGATGATAAcgggaaacaaattttaaacgtaCTACTTACATGTTATAACAAATATTCAGCCcctaataaaacacaaaatattaatgcTAACACCTTTAAGGATGATTTCGAAAACGAAATCATTGTAAAAGAGGAAGAAAACTCATGCTCATCTACTGAAGACGATGAAGAGGATAATAACAGCGGTGTAAGTACAACAACATCGATTGCAGAAGCATTTTGTACTTCAAAGcagcaattaataaaacaatgtgagataaaaaaagaagatttcGATGAAAATGCTGTTAATATTCTAAGTTTAACTGACATGGAGATAGCTTTGAACGATAAAGATATTTTCTCGAAACTCTGTCTGTgtctaaatgaaaataaaaaatggcaagAATTGGCAAAAAATATAGAACTGCCGTATTTTTATTTGGCAAATGCGGAAGCTTTTCTGCTTTCTTTAAAACGCAATTTAAAAGATATATGTTTTGCAAGATTAACTATggctttggaaaaaattgatgaaaaactAATTAAGATTGTAAGAAAATAA
- Protein Sequence
- MDNMMPHLSVTNEKDITDLDTLERIRSVSESSVGGTSGYNSTTSPGAGNSPIASGYSPVQSPDSVLQTEFSQLLIPPELSYQQNSLQYVQLHNVDMNVNNSQSMFYQHNNFSPHLNAENVLNNQSQQQSAYITMAYAEVKYEYEATLRITEQPVEKFRFRYKSEMHGTHGSLNGTNSQRSTKTFPEVQLCGYKGPAIIRCSLFQTNLESPHSHQLVVRKDDHDICDPHELEVSQEVGYYAEFKNMGVIHTAKKFIVEELLKKKRKRLGRDFLTIKEDQDLCKQTEKEAKDMNLNQVRLCFEAFRIEENKSYTPIARPVYSNPINNRKSAQTGELRIVRLSIATGNVCGNDDLMLLVEKVSKKNIKVRFYEMVEDEQIWEAFASFRESDVHHQYAIVCRTPPYKDKDIDKAVEVFIELVRPSDDERSYPPVSFRYKPSYAVISRKRRRTCSSFNSVSCSNSGSLSSGEIPKTVQEQQNSMNIECASAELKSILNNTDFNKSDISLDSNLLAYLDDNDPKFTDLDEMLNNTEGERFATPIEKDGVCVGSEAKKSLYHYKKQMISKKQMDIAKQAVQSQQPNLYLRRILNIFQDTIRSATPLNSTRLSSAAEQITKIINQHSEKYGDSLIHEIVVSNNKLAIPIFKVLNYFKLNDLLNTLLNKQSQTALHYACLHSQPNYIRPLLKLGCNPDIQDAEGNTALHIAVVEKDIKCVESFINSEISLNLNLLNDDGFTPLHLAIRDNNYDIVAKLLKVYAISVATPSRKDGSTALHMAIQQQNLKLVKLILANEQLIASALYATNRAGYTPLDLAKQLVPSDDNGKQILNVLLTCYNKYSAPNKTQNINANTFKDDFENEIIVKEEENSCSSTEDDEEDNNSGVSTTTSIAEAFCTSKQQLIKQCEIKKEDFDENAVNILSLTDMEIALNDKDIFSKLCLCLNENKKWQELAKNIELPYFYLANAEAFLLSLKRNLKDICFARLTMALEKIDEKLIKIVRK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01398202;
- 90% Identity
- -
- 80% Identity
- -