Gspi007431.1
Basic Information
- Insect
- Geotrupes spiniger
- Gene Symbol
- BTBD9
- Assembly
- GCA_959613385.1
- Location
- OY390732.1:36515986-36524208[+]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.091 44 5.3 0.0 5 33 125 153 121 157 0.87 2 4 0.062 30 5.9 0.0 62 108 172 221 165 223 0.84 3 4 2.3e-15 1.1e-12 49.1 0.0 20 109 613 704 601 705 0.91 4 4 0.69 3.3e+02 2.5 0.0 75 109 702 736 699 737 0.90
Sequence Information
- Coding Sequence
- ATGGCTGGATATGCATTTTTGGGTACTTGGGAGATTGTGGGGTACGGGTATATTAATGGAGCTCACAGTGAAAATTGTGGACTGGAAGGagtTCGATTCAGGCTAGATGAAACTGGAGATGTAACGTGGACAATTTCCGATGAACTCAAATCTGTTCCACTTTTTAGTTGTGATACTTACGAAATCGATAATAATTGTGTTCTGCGGTTCGGAGCGTACGCTGGCCACGTCATTGAATTTAGGtcGGAGCCGAGGGAACCTAGAGattcaatgattttaaaatgcGAAGGCTGGTGTATGTTACAGTGTAAACGTGTTGTCGACGAACCTATTGAACAGCATGCTTGTGCTCCATTTACCTTGTTACCAGCTTTAGAAGAGGGATATTTTtctgatattaaaataatagctTCAAATAACAAGCAGTTTAACGTTCACTTAAGTATATTGAAACTGCATGGAAGTGATATATCGTGGGAGTCACAACCTCCACCTTTTACTGGTTTACCAGAAAGCGTGCTGGgtacaattttgcattttttgtattctgAATGTCTACCTGACACTATGGACAAATCTACTGCTGATCAAGTTATAATTGCAGCAACTCCATATCGCTGTCTTTGCAAACTTGTAAACATGTGTCAGCTATACCTTAAAAATATGGCATTGAAACATCaaattattggACTAGTCAACGACATGCATGCAAGTGTTAATCAAATCATAGAACATTTTAGTGTAAGAAATCCTCATTCTCCTTCGGATAATATTACTTCAAATCCAGCAatgttgtgttttattgttAAACAATCAGTCCGGGATACAGCTGTTGTCGTTGTTAAATTACTCCTGCTGTGTGATATCTTCACTAAAAGAAAAAGCGAACTGACAAGGGAAGAGCGCAATGAAATAATACGATATGCAAAATCGAGACTTCCAGTTTTCCTATCACAACTACATAGGTTCCTCCAAGTATTGAAGTCGACGTTCGGTTCCATGTCGCCCACTCAACGTCGTGAAGTGGCCACTTATCTTGTTCCTGAGATTGGAATTATATTGGATACGGTTTCGATGCTCATATCAGAAATTGAAAGGGGACTGCAGCAAATTGTTGCTGTTATGTCTCCACATGACGCCCATAAAAGTAAAAGTGGAGTTAGTGATATGTTAGGGAAATCATTGCgccatattttacatataagaGAACTGACAAAACTTAAAGATACCCAAGAACAAATATCTTTGAGCTTGGAGTTACTGTTGCATAAAAAagaatattttaatgaaatggcTTTCGGCCAAAAAGTTTCTACCGTATCACGAAACCTTGAATACCTAATAGAAGAGTTACCAATATTTCTATTGCACCTAGAAGAATTCACTTCGGCTTTAGAAGAAAAAGTTGTTTGGagagaatttaaattttgtttcaaaatcgGCACGAGTGAAGTTTCTGGTTTGTTACAACAATTGGTCGCCCACTATGAGAAATTGCATTGCGTTATGGTTCAAATATCCGAACTTGTACAAAGAGATTCGTTCACTCAATCTTTACATAGTCTTGGTTTATTAGACACGAACTTACTTGGTACACACTCAAGCGATTGTCAGAAGGATACCAAAAGTTCTTCTTGTTCTACACCAAAACACCATCAACCTGGATATAAGCTCAACTTAGTGGAATCACTTTGTATACCTCCTACGCCAGCAAATAGCACACTTTCAAAGTTATcgcaacaattattaaaaaatggtgTAGGAACTGATATGGAATTTGAGGTTGTTGTTAATTTGTCGGAGCAAGATGGTACTGAAGCAACTTCAGAGGAAGAAACGACCATTATACCAGCTCACCGAGTGATTGTAGCATCTAGATGTGATTGGTTTAGGAGGGCTTTGCTGTCAGGAATGAGAGAAGcaattgaaaaGAAAATAGTTGTGCACGATACCAAcccatttttatttagaattttcctTGAGTATTTGTACAGCGGTCGATTACGACACAATTCTTTAACAACCGAACAACTGTCGGAATTGTTGTTGATAAGTGATAGATACGAAGTTGATTCTTTGAAACAATCATGTGAATATGTCCTACAAACAAGCATCGATCAGGAAtcggtattatattttttgagtaTGGCAGATCAATTTAATGCTGGGATATTAAGGagtgcctgtttgaattttatttcgcaaCACCATGAGTTGATGGAAAGTGAAGTTTATTTCGAGTTACCAATTGCCTTACAAACTGAAATATTCGATTATGCCTGGACACAACCACCAGTTAGGAAATCCAGTACAACAGAACAACTTCTGCCGATGTGCAGTAACCCAACAGAGGTTGATACTAGTTTAGCAGATATTCAGATGGGTTTAGCATGCTTAAATGTCTCTAATAAGccAACTGATTCAAATAGTAGTTCTCTTGAAGAATTACCTCAGAGTCATGATACTGCAAGATTAGATGCATGCATTTCACAACTAAGGGACATTCTTGGTGATACTGCCCCGAGAAAAACCTTAGTACAAGTTATTCTAGCCGCTGATTATGATTTATGCCGAgctatcaattatttttatgcaaagaaTAATGGAGATGAGTAG
- Protein Sequence
- MAGYAFLGTWEIVGYGYINGAHSENCGLEGVRFRLDETGDVTWTISDELKSVPLFSCDTYEIDNNCVLRFGAYAGHVIEFRSEPREPRDSMILKCEGWCMLQCKRVVDEPIEQHACAPFTLLPALEEGYFSDIKIIASNNKQFNVHLSILKLHGSDISWESQPPPFTGLPESVLGTILHFLYSECLPDTMDKSTADQVIIAATPYRCLCKLVNMCQLYLKNMALKHQIIGLVNDMHASVNQIIEHFSVRNPHSPSDNITSNPAMLCFIVKQSVRDTAVVVVKLLLLCDIFTKRKSELTREERNEIIRYAKSRLPVFLSQLHRFLQVLKSTFGSMSPTQRREVATYLVPEIGIILDTVSMLISEIERGLQQIVAVMSPHDAHKSKSGVSDMLGKSLRHILHIRELTKLKDTQEQISLSLELLLHKKEYFNEMAFGQKVSTVSRNLEYLIEELPIFLLHLEEFTSALEEKVVWREFKFCFKIGTSEVSGLLQQLVAHYEKLHCVMVQISELVQRDSFTQSLHSLGLLDTNLLGTHSSDCQKDTKSSSCSTPKHHQPGYKLNLVESLCIPPTPANSTLSKLSQQLLKNGVGTDMEFEVVVNLSEQDGTEATSEEETTIIPAHRVIVASRCDWFRRALLSGMREAIEKKIVVHDTNPFLFRIFLEYLYSGRLRHNSLTTEQLSELLLISDRYEVDSLKQSCEYVLQTSIDQESVLYFLSMADQFNAGILRSACLNFISQHHELMESEVYFELPIALQTEIFDYAWTQPPVRKSSTTEQLLPMCSNPTEVDTSLADIQMGLACLNVSNKPTDSNSSSLEELPQSHDTARLDACISQLRDILGDTAPRKTLVQVILAADYDLCRAINYFYAKNNGDE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -