Gspi013167.1
Basic Information
- Insect
- Geotrupes spiniger
- Gene Symbol
- Lztr1
- Assembly
- GCA_959613385.1
- Location
- OY390734.1:11746946-11749864[-]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.4e-09 6.9e-07 30.5 1.0 4 107 361 496 358 499 0.85 2 4 1.6 7.7e+02 1.3 0.0 78 109 499 530 496 531 0.86 3 4 1.2e-17 5.9e-15 56.4 0.0 6 96 587 678 584 693 0.84 4 4 2.1 1e+03 0.9 0.0 76 99 692 715 685 724 0.78
Sequence Information
- Coding Sequence
- atgaGTGGGAGCGTATGTATGGAATCATCGAATGCTTTTTTTGATAATGGCCTAACTATCGAAGTTGGTCCATTAGAAACTGTGCATAGATGGAAACGTATGCCAGAATGTGACGAATTTGTAGGAGCAAGACGGAGTAAACATACGGTGGTTGCATTCAGCGATAGCATTTATGTCTTTGGAGGTGATAATGGTAAAAGCATGTTAAACGATTTGCTTCGTTTCGACGTAAAGGAAATGTCATGGGGACGAGCCTGTGCCGGTAGTGGTTGCCCACCGGCACCAAGATATCATCATTCCGCCGTAGTTCATAACGTTTCTATGTACGTATTTGGAGGCTACACTGGAGATATACATTCGAATTCAAATCTCACCAACAAAAATGATTTGTTCGAGTACAAGTTCAACTCTGGCCATTGGGTTGAATGGAAGTTTACAGGACAAACACCGGTGCCACGTTCTGCACACGGCGCAGCTGTTTATGACAACAAGTTATGGATTTTTGCTGGATATGATGGAAATGCTCGTTTAAATGATATGTGGACAATTTCCTTAATTGGTGATAATAGAGCCTGGGAAGAAGTGGATCAGAAAGGAGAGCGCCCACCTACTTGCTGTAATTTCCCTGTTGCTGTAGCAAGAGAATGTATGTTTGTTTTCAGCGGACAAAGTGgtgcaaaaattacaaattcacTCTTTCAGTTTAGCTTCAAAGATAAAGCTTGGACTCGTATATCAACAGAACACATTCTACGTGGTACACCACCTCCGCCTGCACGAAGATACGGCCACACTATGGTGGCACATGATCGCCACCTCTACGTATTTGGTGGTGCAGCCGATAGTACATTATCAAATGATCTGCACTGTTTTGATCTCGATTCCCAAACATGGTCTGTAATTTTACCAGCAGCCGAGTCTTTTGTTCCATCCGGTAGATTATTTCACGCGGCGGCTGTTTTGGAGGACGCCATGTTTATATTTGGGGGCACTGTAGATAACAACGTTCGAAGTGGTGAAATGTACCGATTCCAGTTTTCAAACTACCCCAAATGTACTCTTCACGACGATTACGGAAAGATTTTGGAATCACACATGCTGTGTGATTTACAATTTATGGTCGGAGTCGAAGAAGTCAAGATACTGACGCATTTGGCAATTGTCGCCGCACGATCGTTatatttacgaaataaaattagaaaagccAAAGCCTCACGAGACGAACATTTAGAACGACTGTTCGGCACGACCAGAGTGTCGTTTAAGGATGTTCCGTTGGTCGAAGTTAAATTGGAGGATGCCAATCCTGAAGCGTTCGAGatggttttgaattatatttatatggaCTGCATTGATCCAACGAAGAAAGCCAATAAAGGAGAAGATCCGTTTAGCAATCGTATCGTGTTGCTTATGATGGATGTTTATCGGCTGGCTGTGAAATTCGACATGGCACGACTGGAGCACTTGTGCATTCAATATTTGCACGCGACAGTTTGTTTAAATAACGTGCTTGTCGCGCTTCACAATGCCGATTCTTTGAAATTGGATTTCATCAAAGAATTTTGTTTGCGATTCATCGTGAAGGAATCGAATTATAATCAAATTGTAATGAGCAAAGAGTTTGAAACGTTGGATAGGGGACTTATGGTTGAGATCATAAGGCGTAAGCAAATGCCACAAACCAAGGTGCATATTGATCCACATTTTGATACTGCTGGTTCATCGCTGGAGCAGGACATGGCTATGTTTCTGAGGAGCACAGGGTTAGAATTTTGTGACATTGATTTACTTTTGGACAGCTACATTTTTCCTGCACATAAGTCAATTTTGGCCGCAAGATGTGGATACTTTGAAGCCATGTTTAGGTCTTTTATGCCATCAGACAGCACAGTCCGGATTCAAATAGGTGAAATGACACCATCTAAAGAGTCCTTCGATTCTCTTCTTCGATACATCTATTATGGCGACGTTAACATGCCACCTGAAGATTCGCTGTATTTATTTTCGGCTCCCTTTTTCTACGGATTCACGAACACACGTCTGCAGGCGTTCTGCAAGCACAATCTTGAGATGAACGTCACATTTGAAAATGTCATACAAGTCCTCGAAGCCGCCGACAGAATGCAAGCCTTCGAAATGAAAAAGTACGCGCTTGACATGATCGTACATTACATACCTCAAGTGGCGAAGCTACCAAAACTGAAAGTGTTAAGCAAAGAGTTGATATTGGATATACTGATGGCCGTAGCTACCCAGCGCGAATCGAAAATGACTCAGGACATGTCATCTGCAAGTTTGAATAGCGAATCATGA
- Protein Sequence
- MSGSVCMESSNAFFDNGLTIEVGPLETVHRWKRMPECDEFVGARRSKHTVVAFSDSIYVFGGDNGKSMLNDLLRFDVKEMSWGRACAGSGCPPAPRYHHSAVVHNVSMYVFGGYTGDIHSNSNLTNKNDLFEYKFNSGHWVEWKFTGQTPVPRSAHGAAVYDNKLWIFAGYDGNARLNDMWTISLIGDNRAWEEVDQKGERPPTCCNFPVAVARECMFVFSGQSGAKITNSLFQFSFKDKAWTRISTEHILRGTPPPPARRYGHTMVAHDRHLYVFGGAADSTLSNDLHCFDLDSQTWSVILPAAESFVPSGRLFHAAAVLEDAMFIFGGTVDNNVRSGEMYRFQFSNYPKCTLHDDYGKILESHMLCDLQFMVGVEEVKILTHLAIVAARSLYLRNKIRKAKASRDEHLERLFGTTRVSFKDVPLVEVKLEDANPEAFEMVLNYIYMDCIDPTKKANKGEDPFSNRIVLLMMDVYRLAVKFDMARLEHLCIQYLHATVCLNNVLVALHNADSLKLDFIKEFCLRFIVKESNYNQIVMSKEFETLDRGLMVEIIRRKQMPQTKVHIDPHFDTAGSSLEQDMAMFLRSTGLEFCDIDLLLDSYIFPAHKSILAARCGYFEAMFRSFMPSDSTVRIQIGEMTPSKESFDSLLRYIYYGDVNMPPEDSLYLFSAPFFYGFTNTRLQAFCKHNLEMNVTFENVIQVLEAADRMQAFEMKKYALDMIVHYIPQVAKLPKLKVLSKELILDILMAVATQRESKMTQDMSSASLNSES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01186316;
- 90% Identity
- -
- 80% Identity
- -