Gspi000147.1
Basic Information
- Insect
- Geotrupes spiniger
- Gene Symbol
- X-element\ORF2
- Assembly
- GCA_959613385.1
- Location
- CAUIJQ010000006.1:5948556-5953916[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-05 0.13 12.9 0.0 118 168 417 467 411 479 0.91 2 2 9.4e-06 0.12 13.0 0.0 118 168 523 573 517 585 0.91
Sequence Information
- Coding Sequence
- ATGAATGAAGATGAAACCGAAATAGCTAACAGTTTTGCAAAATCGTTCAAAGAAGAAATATCTAATATTATACACGTATGCCCCTCAAACACAAATACTGTCTATTTGGGTAGACGACAACAAACACAGTCTCAAGTGCAATCGATCTACATACCACCAATATCATTAGAAAGTGTTCAAGCCATAATCCGAGAAATGAAAACTGATAAGGCGCCAGGATGGGATAAAATCAAGATGAAGGATATAAAGGCACACATTAATATTTTCGCATACGCCATAAAAAGGTTAATAAACCTTTCAATCGGTCAAGGAAGAGTCCCAGAAGGATTGAAAAAAGCTGTAGTTACACCTGTATATAAGAAAGGCTCGCACAAGTGCTATAAAAATTACAGACCCATTTCGGTACTGCCATCGatggaaaaaaatttggaaacatACCTTGCAGGGAAACTAAGCGATTATCTGACGAAATACAATATTGTCGATGAGCATCAGCATGGGTTCCAAAAGGGAAAAAGTACAGTGTTTCTGTTGGAGAATTTCGCAGACATCATCAATACAAATCTTGACAACAATATGCATGTAGTGTGCGtatttgttgatttctcgaAGGCCTTCGACATTATAAACCACAAACTATTGATGGAAATGCTGGAAAGGGTGGGTGTAAGAGGTGTGCTCTTTGATTGGTTTGAAGACTACCTTCAAAAAAGACAGTACGCAGTTAAAATAGGGAAAGTAATAGGATCGTACGTCGATGTGGAAAGAGGTGTCCCACAGGGAAGCATTCTAGGTccgatattatatttaatttacgttaacgATATAAGAAATTGCTTTAAACACTGTAAATATAAACTATATGCGGATGACACATTAATGTTTGCTACTCATAAAGACCTAGGCACGGCAGTTGAAATGGTTCAGGAGGACTTTAGTGCATTTCAAGTTTGGTCGcataacaaagaattaaaaataaatatggataaaacTAAAGTGCTCCATATTTCTTCACCGCATCAAAAGGACGATAGAtgtgtgaaaattatatatcactCGGCGGATTGTGTGCACAGAAACATCATTAACGTGAACAAGCCAGTATGTAGTTGTGTGGAGATGTTGAACGAAGTAAATCACTTAGTTTACTTGGGCGTTGATATCGACAACAGGTTCTTGTGGGATGAACATATCAATACCGTGTCCAAGAGATTGAGACACTTTGCGggtcaattttattacttgcggGACTGGCTCCCACAGGAAGTGTTAAAGACTATATACCACGCACTCGTCGAATCAACACTAACATACGCCATAACATCGTGGGGAAACGCATCCGATTCACACATAAATAAGTTGCAGAAGATCCAAGATAGAATCGTTAAACACTTAGCTGCAGAAAATCCGAACGGtgcaaTATGTAGTTGTGTGGAGATGTTGAACGAAGTAAATCACTTAGTTTACTTGGGCGTTGATATCGACAACAGGTTCTTGTGGGATGAACATATCAATACCGTGTCCAAGAGATTGAGACACTTTGCGggtcaattttattacttgcggGACTGGCTCCCACAGGAAGTGTTAAAGACTATATACCACGCACTCGTCGAATCAACACTAACATACGCCATAACATCGTGGGGAAACGCATCCGATTCACACATAAATAAGTTGCAGAAGATCCAAGATAGAATCGTTAAACACTTAGCTGCAGAAAATCCGAACGGtgcaagtaaatacaaaaccacAGGATTGCTGGATGTAAAAGGGCTACTGGACTTCAAACTAATGGTAAACAATTACTTCAccaccaacaacaaaataaaaattgaccataTTTATAACTCGAGAGGTAGAGAGAAGGGGCAATTAAAGGTAGCTGCCCACAAcaacaaatatggaaaaagaacATTAAGTGTAACCATACCGACTTTGTTCAATAAACTgccgcaaaatttacaaaaactagaaactttaaatgaagtgaaaaggCACTTAAAGATGTGGTTGGTGGAAAAGTGA
- Protein Sequence
- MNEDETEIANSFAKSFKEEISNIIHVCPSNTNTVYLGRRQQTQSQVQSIYIPPISLESVQAIIREMKTDKAPGWDKIKMKDIKAHINIFAYAIKRLINLSIGQGRVPEGLKKAVVTPVYKKGSHKCYKNYRPISVLPSMEKNLETYLAGKLSDYLTKYNIVDEHQHGFQKGKSTVFLLENFADIINTNLDNNMHVVCVFVDFSKAFDIINHKLLMEMLERVGVRGVLFDWFEDYLQKRQYAVKIGKVIGSYVDVERGVPQGSILGPILYLIYVNDIRNCFKHCKYKLYADDTLMFATHKDLGTAVEMVQEDFSAFQVWSHNKELKINMDKTKVLHISSPHQKDDRCVKIIYHSADCVHRNIINVNKPVCSCVEMLNEVNHLVYLGVDIDNRFLWDEHINTVSKRLRHFAGQFYYLRDWLPQEVLKTIYHALVESTLTYAITSWGNASDSHINKLQKIQDRIVKHLAAENPNGAICSCVEMLNEVNHLVYLGVDIDNRFLWDEHINTVSKRLRHFAGQFYYLRDWLPQEVLKTIYHALVESTLTYAITSWGNASDSHINKLQKIQDRIVKHLAAENPNGASKYKTTGLLDVKGLLDFKLMVNNYFTTNNKIKIDHIYNSRGREKGQLKVAAHNNKYGKRTLSVTIPTLFNKLPQNLQKLETLNEVKRHLKMWLVEK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -