Gpol003745.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Gastrophysa polygoni
Gene Symbol
nfxl1
Assembly
GCA_963576655.1
Location
OY755083.1:565801-584013[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 2 2.7e+04 -8.0 5.6 15 19 133 137 132 137 0.81
2 20 0.15 2e+03 -0.5 0.4 4 10 168 174 167 174 0.95
3 20 9.9e-08 0.0013 19.2 16.7 1 19 182 199 182 199 0.99
4 20 3.9e-07 0.0052 17.3 16.8 1 19 235 253 229 253 0.86
5 20 5.2e-09 6.9e-05 23.3 12.0 1 19 288 306 288 306 0.99
6 20 2 2.7e+04 -4.1 1.1 6 10 331 335 331 336 0.87
7 20 3.7e-05 0.5 11.0 12.9 1 18 341 358 341 359 0.97
8 20 1.2 1.6e+04 -3.4 0.2 1 4 368 371 368 372 0.87
9 20 6.5e-05 0.86 10.2 17.1 1 18 393 410 393 411 0.94
10 20 1.3e-09 1.7e-05 25.3 11.8 1 18 420 437 420 438 0.97
11 20 0.69 9.2e+03 -2.6 1.0 5 10 466 471 466 471 0.94
12 20 0.00019 2.5 8.8 5.9 10 19 487 496 484 496 0.89
13 20 0.42 5.6e+03 -1.9 5.9 4 12 508 516 506 516 0.89
14 20 2 2.7e+04 -7.1 4.5 14 18 544 548 544 548 0.86
15 20 0.4 5.3e+03 -1.9 1.2 6 10 575 579 574 579 0.85
16 20 0.00051 6.8 7.4 4.1 1 11 585 595 585 596 0.99
17 20 0.69 9.2e+03 -2.6 1.5 14 18 609 613 609 614 0.84
18 20 0.0031 41 4.9 17.3 3 19 626 642 625 642 0.94
19 20 7.4e-07 0.0098 16.4 11.6 1 18 685 704 685 705 0.90
20 20 1.1 1.5e+04 -3.3 0.9 6 10 735 739 734 739 0.89

Sequence Information

Coding Sequence
ATGTCTTCAGAAGCAAAGTTCAAGGAAGCGCAATCAAAATTACAAGCAGCTGTTGCAAAACATGTGAAGAAGTATGAGTCTTCTTCAGATGAAGATGAACTGGAATCTAGTACTGTGATAGATACACTTCTGAAAGACTATGAACATACAGGTGGTGCAAATGAACAGTTTCGTAAAACCAAGTCATTTCTGGAGGAAACCTTCCTTTCAGGTTCTTCAACCTGTCTCATTTGTATATCCAGAGTGAAAAGAGATGATGAGATATGGAGCTGTTCAAGCTGTTTCGGATTTTTCCACTTGATGTGCATTCAACGATGGTCGAAGGATACTCTCACCCAGCAAAAGCAAGCTCTTGAAGGCAATATAATACGCCAACAAGCAAAACTATGTTGGTGTTGTCCCAAATGTCGTTTTGAATATTCAACCGAAGACGTTCCCACAAAATATCTATGCTTTTGCAAAAAAACCGAGAAGCCAAAGTTTCACCCTTTCTTAGTACCCCATTCTTGTGGGGAAATTTGTAAAAAGGACCTTATTCCCAGTTGTGGGCATAGTTGTTTACTTCTTTGTCATCCAGGACCGTGTCCTCCATGCCCTGTCACCGTGAACGTTCCCTGCTACTGCGGTGCTCAACTTCCTAAAACCCAACGGTGCAGCAACAAAGAATGGTCGTGTAACGGCGTCTGCGGCAAGCTTCTGGGCTGTCGCAAACATACTTGTTCGGATCCTTGTCATCCCGGTGAATGCAAACCTTGCCCCAAGAAGAGCATACAGAAGTGCGTTTGTAAATCGCAGCAGAAGTTGAGGGACTGTGCCAGCCCAGTTTGGAATTGTGACAAGatttgCAAAAAACCCTTGGAATGTGGCAATCATGTATGCGAACAAGTATGTCACGACGGTGTTTGTGAATCGTGTCCTTTGACTAAACCGAGATCTTGTCCCTGTGGCAAATCCGTGTATCACTTGCCCTGCACAGAAGAGATACCTTGTTGCCAAGATACTTGCGAAAAAGTTCTCGACTGCGGAGTTCATCAATGTAATCAGAGATGTCATAAAGACAAGTGTGGACAGTGCCTTGAAACTATCGAGAAATTGTGTCGTTGTGGTCTGCATTCCAAGGAAGTGAATTGTTTCAAGCCTTATTTATGTGAAGTGAAATGTAAAAGGATGAAAGATTGCAACAAACACCCTTGCAATAGAAAGTGTTGCGACGGAAATTGTCCACCGTGTGAGAAATCCTGCGGTCGTACACTCAGCTGTAGCAACCACAAATGTACCTCGGTGTGTCACAGAGGACCTTGTTATCCGTGTAACCAAACCGATGAGGTTTCTTGTCGATGTGGTACGACGAAAATTGTAGTGCCTTGCGGTCGTAAAAATAAGACCAAGCCGCCGAAATGCAACAAATTATGTTTATTGCCACCGGATTGCCACCACAAGAAAAGAGAAAATCACCGATGTCATTTCGGAGACTGCCCTCCGTGCAAGCAAATTTGTGATAGGGAAAGAACCGCGTGTCTTCATCCGTGTCCGTCGCAGTGTCATTCGGCTGTGCTCGTGAAAATCGAGGCGCATAAAGCTTCCATGCCGTGGGAGCAAACCAAGCCTCTGATCGAGAGGAGGGCCTTACCTTGTCCGGATTGTGTCGTATCGGTGCCGGTGATATGTTTAGGAGGACATGAAAATAGCGATTGGCCGTGCTATTTAGCAAAACCGTCTAGTTGCCAACGCCCTTGCGGACGGATTTTGAAGTGCGGCAATCACATTTGCGGTTTGCCTTGCCATTTCGTCGAAGATCCTCCCGATGAATTCCAGTCGGGTGTCAACTGCGAACCATGCGAAGGCAGCTGCACCAAAGACAGACCGGAGGGGTGTCAGCACCCTTGTCCGATACCGTGCCACCCCGGGACGTGTCCCGCGTGTAAAGTCATGATACGCGTCAAATGCTTTTGCGGTCTCAATCAGTTATACGTCACGTGCGCCGATTGGCTCGATGAGGAGAAGAAGATCGATTTGCAGAGCTGCAAGAACCAGTGCCCGAAAAATTACGTCTGTGGACACAGATGCAAAGCAAATTGTCATCCGGGTGATTGTCCGAACGCGGATTCGTGCAAGAAGAAAGTCAAAATCACTTGCAAGTGCAAGCGAATCCGGAAAGAATTTTCTTGCGAGTCGATCAGGAAACAGTTGGCGATCGTGGAATGCGATGAAGTGTGCCAGAAAAAGAAGGAAGAAGAACGAAAGATACGAGAGCAGGCTGAAGAAGCGAGAAGGTTGgaagaggaattgaaaaatcagaggGAACtgcagaaatatcagaaaatgttTGACGGGAAGAAGAAACAAAGAGAACGAAGATCGTTCGAAGATAAGGAAGAAATCGgtgGCGATCAAGCTCCTTGCATCTGGGTTACTTTTGGTCCTCTCATTCATGTTTTATTTTCCATAGCTATGACATGCTTCCATGGCTATAGAGTTTTATTTACAACAAAATCACCTGGATCCAGATCTACAAGAACGATGTTGGCTAAATTAGATACTGGAGAATCAGTTCAAATCGAAACGGTAGCACAATCGATGACGAGCCATCTGCCAACGGCTTTCTGGACCTGCGTATCAGTGCTGTCGTCAGTGTTCACCCTGTATTCCCTGGTGCACTTTTCGATCTATCTGGACGGATACTACCGAACTTGCAAGGAATACAGGACGACTCTAGAGAAGACTTTGTCTGTTCACGGTTCCGCTTTGCCGGTTCTGTACAACAGATTGTCGTGCCAAGGTGTGTTCGATTTCATGGATTACATGCAACTGGACAGCGGAAACGCTTATCGGGATGGAATCATCAATTCTGGGCTGACGCTGGTACTCGGGATAGCATCCTCGTGTGTTTCTTGGCTGTTATTTTTGTTCGCGAGTATCGTGAATGTAAGAGTGACGCTAAGCAATAATGTCTAA
Protein Sequence
MSSEAKFKEAQSKLQAAVAKHVKKYESSSDEDELESSTVIDTLLKDYEHTGGANEQFRKTKSFLEETFLSGSSTCLICISRVKRDDEIWSCSSCFGFFHLMCIQRWSKDTLTQQKQALEGNIIRQQAKLCWCCPKCRFEYSTEDVPTKYLCFCKKTEKPKFHPFLVPHSCGEICKKDLIPSCGHSCLLLCHPGPCPPCPVTVNVPCYCGAQLPKTQRCSNKEWSCNGVCGKLLGCRKHTCSDPCHPGECKPCPKKSIQKCVCKSQQKLRDCASPVWNCDKICKKPLECGNHVCEQVCHDGVCESCPLTKPRSCPCGKSVYHLPCTEEIPCCQDTCEKVLDCGVHQCNQRCHKDKCGQCLETIEKLCRCGLHSKEVNCFKPYLCEVKCKRMKDCNKHPCNRKCCDGNCPPCEKSCGRTLSCSNHKCTSVCHRGPCYPCNQTDEVSCRCGTTKIVVPCGRKNKTKPPKCNKLCLLPPDCHHKKRENHRCHFGDCPPCKQICDRERTACLHPCPSQCHSAVLVKIEAHKASMPWEQTKPLIERRALPCPDCVVSVPVICLGGHENSDWPCYLAKPSSCQRPCGRILKCGNHICGLPCHFVEDPPDEFQSGVNCEPCEGSCTKDRPEGCQHPCPIPCHPGTCPACKVMIRVKCFCGLNQLYVTCADWLDEEKKIDLQSCKNQCPKNYVCGHRCKANCHPGDCPNADSCKKKVKITCKCKRIRKEFSCESIRKQLAIVECDEVCQKKKEEERKIREQAEEARRLEEELKNQRELQKYQKMFDGKKKQRERRSFEDKEEIGGDQAPCIWVTFGPLIHVLFSIAMTCFHGYRVLFTTKSPGSRSTRTMLAKLDTGESVQIETVAQSMTSHLPTAFWTCVSVLSSVFTLYSLVHFSIYLDGYYRTCKEYRTTLEKTLSVHGSALPVLYNRLSCQGVFDFMDYMQLDSGNAYRDGIINSGLTLVLGIASSCVSWLLFLFASIVNVRVTLSNNV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00331226;
90% Identity
-
80% Identity
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