Gpol012974.1
Basic Information
- Insect
- Gastrophysa polygoni
- Gene Symbol
- Lrrfip2_1
- Assembly
- GCA_963576655.1
- Location
- OY755086.1:25559459-25578444[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.9e-108 1.8e-103 346.5 28.0 1 300 74 362 74 362 0.97 2 2 0.045 1.2e+03 -0.9 2.9 7 232 394 430 363 437 0.44
Sequence Information
- Coding Sequence
- ATGACGGAAGATGAGTCGCAAATCGTTGCGGATTCCGTCGAAATAACAAACACCGAAGACGGCGAAGAAAACAACAACAATGTGGTAACGTTGAAGGGTGTGACGCGGACAGAGACGTCCGATGATTTCCTCGAGGATTCGATCGGTGGTGGGATGGAAAGTGAGGTTATGGAGGACTCTGACGTTATTCATTCGTTTATTCACAGCACCACCGATGAGGCCGAGGCGCGCCTATGGGCAAAACGGCAGGCCCGAGCAGAGGCGCGCGAGATCCGCTTCCGAGAGCTGGAGCGGCAGCAGCGCGAGCAGGAGGAGAACGCCGACCGGCAGTTCGACATGCTGTCGGCCGACGCGGGCGTCGCCGCCGCGACGGCCCGGACGACGCCGCGCGCCGCCGCCGTCGGCAGGTACATGTCGAGCAGGCGCAGCAGCGAGGATTCGCTGGAGGACGGCGGCGGGCCGGTTTCGCTCAGGGAGATGCGGCACGAACTCAAGGAGGTTGAGGAAAAATTCCGGAAAGCCATGATTGCCAATGCCCAGCTGGACAATGACAAGACATCGCATACGTACCAGCTGGAGTTGCTGAAAGATCGACTGGAGGACCTCGAGGAGGACCACTCGCAGCTGAAGCGCGAGCACCGCGACCGGACGCGCGAGAGCGAGCAGCTGCGGCGCGCGTGCGCGAAGCTGCAGGAGGAGGCGGCGTGGGCGCGGCGCGAGCTCGACGAGCGCGACCGGCTGATAGCGGAGAAGGGTCTGGTGATGGTGACGGCGGAGGGCGGGGGCGGAGCGCAGAGGGCGCTCGTGTCGGCGGAGAACGCGCGGCTGTTGGAGGACGCAGGCGAGGGGAGTCTTGACGTACGGCTGGAGAGGTTTGCAAAAGAGAAGTCGGAACTACAAGATCAAATTAGTCATTTAAAATTAGAATTAGAAGAGGAGAAGAGCAAGAGGAGAAAACCGAGTTCAGGTGGAGTTTTGAATGGCCCATCATCTGATTACGACTATGACGACTTACAAAGGGAGGCCAGCAAACAGCTAGCCGACTACAAATTCAGGGCTCAGAAGGCAGAGCAAGACGTGGCGACATTGCAAGCGACAGTGGCTCGACTCGAGAGCCAAGTGATCAGGTACAAGACGGCCTCGGAGGTTTCGGAACAATCGGAAGAGGCTCTCAAGGCCGAGAAGAGGAAGTTGCAGCGCGAGGCTAGAGATGCTCTTAGTAGAGCTGAAGAATTGGAAACGTCAAACACACACCTCCTCAAGAGACTGGACAAATTGAAAAACGCGAAATCTGCTCTCTTAAAAGAACTTTGA
- Protein Sequence
- MTEDESQIVADSVEITNTEDGEENNNNVVTLKGVTRTETSDDFLEDSIGGGMESEVMEDSDVIHSFIHSTTDEAEARLWAKRQARAEAREIRFRELERQQREQEENADRQFDMLSADAGVAAATARTTPRAAAVGRYMSSRRSSEDSLEDGGGPVSLREMRHELKEVEEKFRKAMIANAQLDNDKTSHTYQLELLKDRLEDLEEDHSQLKREHRDRTRESEQLRRACAKLQEEAAWARRELDERDRLIAEKGLVMVTAEGGGGAQRALVSAENARLLEDAGEGSLDVRLERFAKEKSELQDQISHLKLELEEEKSKRRKPSSGGVLNGPSSDYDYDDLQREASKQLADYKFRAQKAEQDVATLQATVARLESQVIRYKTASEVSEQSEEALKAEKRKLQREARDALSRAEELETSNTHLLKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00330598;
- 90% Identity
- -
- 80% Identity
- -