Gpol008215.1
Basic Information
- Insect
- Gastrophysa polygoni
- Gene Symbol
- RpL31
- Assembly
- GCA_963576655.1
- Location
- OY755084.1:14357679-14365218[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 5.2e-15 4.2e-12 46.1 0.1 2 45 368 411 367 411 0.96 2 3 1.2 9.3e+02 0.2 0.4 6 18 478 491 474 493 0.81 3 3 3.8 3.1e+03 -1.5 0.0 7 19 632 647 632 647 0.85
Sequence Information
- Coding Sequence
- ATGGCGACAGCACAACAGTACTGCCTTCGCTGGAACAACCACCGCTCCAATCTACTCACGGTATTCGATGAGCTCCTCCAAAGCGAGTCATTCACTGACGTCACCATCGCCTGCGAACGCGGCAGCCCCATCAAATGCCACAGGATGGTGCTAGCAGCGTGCTCCCCATATTTCCAGAACCTCTTCATCGACCTCCCCTGCAAACACCCCGTGGTCGTCCTCAAAGACGTCAAACATAGCGAAATCAAAGCCATCTTGGAGTACATGTACCGCGGAGAAGTTAACGTGGCTCAAGACCAGTTAGCTGCCCTCCTCAAAGTAGCAGAAGCCTTGAAGGTTAAAGGTCTGGTAGAGGAAAACCGCTCCAGACCCATAAAAGAGGAAGAAGAACAGCCTCACGTTATGGAACACGCCTCCCCAATATCCACATCAAATTCTGTTATGCAAGGCATAGTACACAGCAGCAGCAGTAACAATTCTCCACCCCATTCGACCAACGCCATGTATAAGAACCCCTACAACCCTTACGCCAACAGCAAACCGCAGGATGCCAGGATGGATTCCAGGATGGACTCCAGGCTAGACTCCAGACTCGACTCCAGGATGAACCTGCCCATGTGGGCGGTACCAGGTTTGCCTCTGCCCCCTCATTCCGCCCCTGTACCGACCACCAGCCACCCTTCTACTGCCACTATGCTCAGTGGTTGTTACGACGTAGTCAGCTCTGACATGTCACCATTGAAGAGGAAGAAGTTCTCCAGCCTGTTGATGAACAGGGACACCCCAATCTTGAGGACTGTTCTCGGCCAAAGCCAAGCCGATTCCTCCCAACCTGTCAGCCTGGTTTGTCATCCAGACAGTGCTGAACATTCCAACGGAGCTGAAGAAAGGATGAAGCTCATGAAAAACGAACCTTCGGAAGACGCTCAATCGCCCTACACGGACTACAGCCCAACGAATGACGAAGAGGATAAATCGAAGCTAGCTATTCCCTCCTCTCTGCCGCAATCCTTTAACCACGATAAACGCAGCGTTGCTTCTGGTATAGCAGCCTACGTGGACCCTCACAAGCCCGAATGGAGGCGCTACAAGCAGTACTCCAGGGACGAAATCATGTCAGCGATAGACGCAGTGAGGAACGGAATGTCAGCTTTGCAAGCTGCCAGGAAATACGGAGTACCTTCGAGAACGCTTTACGATAAGGTTAAAAAGCTTGGGATAACCACAAGCAGGCCGTTCAAGAGGGGTAGCAACGGAAGCTCCAACTGCTTTCCCTACGGCACAGGCTCACCCTACGGAGGTCACTTGTCAGAATCCGACGATGGAATGATGAGTAATAACTCCGCTTTGCTGGAAGCTAGCAGTTTCCTGCAGCACGCTTTAGATAGCAGAGGGGGTGATGAACGTGAAGCTTTGGCAGCTATGGCAGCTGCAGCAGCTGCCCATGCAGTAGCCTCCGGTCATTCCACTAGCCCCAATAACCACGGGAGAGCAAGGAGCCCCAGCCCAAGCCCCACGATGCTCAAGTACATGAGGCACGCTAGTATGACGCCTTCACCTGCAGGTGGTAGCGACCACCATAACTCCCTAGGGAGTTCGGAGAGGGACCACGACGATGAAGAGGACCAAGTCGAAGACCTCTCCATCGGCAGGAAGGAGCCCAGAGAGCCCACCAGGGTGATCATGCCACCCATGAACCAAATCTCGGCTATCATGAAGAAGGAAGAGATGTTGATAGATAGCCTCAAGGAGGAGGCTAGGAGGGAGGTCACGATGGCGAAACAAAAGGGCGAGAAGAAAGGCAAATCTGCCATTAATGAAGTAGTAACTCGTGAGTACACAGTAAACCTTCACAAAAGGTTGCATGGCATTGGTTTCAAGAAACGTGCCCCCAGGGCCATCAAAGCCATTCGTCAATTCGCTGAAAAACAGATGGGTACACCTGATGTTAGAATCGATACCAGACTGAACAAGCAGTTATGGTCCAAAGGTATCAGgaatgtCCCTTTCCGTATTCGAGTAAGACTCTCCAGGAGAAGGAATGATGATGAAGACTCTGTAAACAAACTTTACACTCTTATTACTTATATTCCAGTAGCAACTTTCAAAGGTCTTCAGACTGAGAATGTTGACGCAAGTcaggaatga
- Protein Sequence
- MATAQQYCLRWNNHRSNLLTVFDELLQSESFTDVTIACERGSPIKCHRMVLAACSPYFQNLFIDLPCKHPVVVLKDVKHSEIKAILEYMYRGEVNVAQDQLAALLKVAEALKVKGLVEENRSRPIKEEEEQPHVMEHASPISTSNSVMQGIVHSSSSNNSPPHSTNAMYKNPYNPYANSKPQDARMDSRMDSRLDSRLDSRMNLPMWAVPGLPLPPHSAPVPTTSHPSTATMLSGCYDVVSSDMSPLKRKKFSSLLMNRDTPILRTVLGQSQADSSQPVSLVCHPDSAEHSNGAEERMKLMKNEPSEDAQSPYTDYSPTNDEEDKSKLAIPSSLPQSFNHDKRSVASGIAAYVDPHKPEWRRYKQYSRDEIMSAIDAVRNGMSALQAARKYGVPSRTLYDKVKKLGITTSRPFKRGSNGSSNCFPYGTGSPYGGHLSESDDGMMSNNSALLEASSFLQHALDSRGGDEREALAAMAAAAAAHAVASGHSTSPNNHGRARSPSPSPTMLKYMRHASMTPSPAGGSDHHNSLGSSERDHDDEEDQVEDLSIGRKEPREPTRVIMPPMNQISAIMKKEEMLIDSLKEEARREVTMAKQKGEKKGKSAINEVVTREYTVNLHKRLHGIGFKKRAPRAIKAIRQFAEKQMGTPDVRIDTRLNKQLWSKGIRNVPFRIRVRLSRRRNDDEDSVNKLYTLITYIPVATFKGLQTENVDASQE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01295881;
- 90% Identity
- iTF_00740141;
- 80% Identity
- iTF_00740141;