Gpol019468.2
Basic Information
- Insect
- Gastrophysa polygoni
- Gene Symbol
- bab1_1
- Assembly
- GCA_963576655.1
- Location
- OY755090.1:8431334-8439441[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4e-17 1.9e-14 53.6 0.0 1 43 62 105 62 107 0.95 2 2 3.6 2.9e+03 -1.4 1.1 6 15 204 213 202 218 0.87
Sequence Information
- Coding Sequence
- ATGATAGGTGGCAATAGCACTGAAGAAGATCCTCCAAACATAGATCAGTACGCTCATGAACGCAATGGTCGACCAGACAGCTACCAGTACCAGCTGCAGTCCATGTGGCAGAAGTGCTGGAACACCAACCAGTCGCTGGTGCACAACCTGCGGTTCCGAGAGCGCGGGCCGCTCAAGTCGTGGCGACCAGAGACGATGGCCGAAGCGATCTTCTCCGTGCTGAAGGAGGGCCTGTCGCTGTCGCAGGCGGCCAGGAAGTACGACATCCCCTATCCGACGTTCGTGCTCTACGCCAACAGGGTGCACAACATGCTGGGACCGTCCGCGGACGGAGGATCAGATTTGAGACCGAAAGGAAGAGGACGACCGCAGAGAATATTGCTAGGAGTGTGGCCGGATGAACACATACGAGGAGTCATAAGAGCTGTTGTTTTCCGAGATTCCCATCATATCAAAGAAGAACCATCACATATGAATGCTTACCCTAGATTACATGACGGGAGCACGATCCAGAGCTACCAGtcgcagcagcagcagcagcaacagcagcagcagaaCTGCCTGAGCAACGGCTCCGATCCGAACAGCGTGTCCCCGGGAGCGGCGGCCGCGGCCGCCGTCGCGGCCGTAGCCCAAGGGCTGCGCCAGCAGATGTGCAGCAtggtggcggcggcggcgcaCGGCCAGAGCACCGGCAACGCCACCAATCCGGTCGCGAGTCTGGTCAACTCGCTGGCCATGGCGGGGCGATGCGGCATGCCGCCCACCAACGGTGCGCCGCCCATGAGCATGAGCCATATCACGTCGATGAGGAACATGAGCAGTCCCGCCGGCAGCATACAGGACCTGAGGATTAGCCCTGCAGAATTTGGAATGGAGAGTCCAATATCGAGTCCTTTGGGACTGACGGTTTCCAGCAGTATGGAGCCATCGATCAACATGAGCATAGGAAATAATATGGATGTTGGCATTGGAGTATCGGGCATGACGTACAAACCAGCGCGACCGTTCGAGTCCCCGCGGCCCGAAAACCTCTTTCAAGAGGACATCGACGACCTCGTCAAGCCGATGCACCAGTCGGCTGGTGCGCATTCCAAGGACGCGATGGCCATCAAGATGGAGCCGATGACCGAGTGCCGAGGCGATTGA
- Protein Sequence
- MIGGNSTEEDPPNIDQYAHERNGRPDSYQYQLQSMWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGSDLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDSHHIKEEPSHMNAYPRLHDGSTIQSYQSQQQQQQQQQQNCLSNGSDPNSVSPGAAAAAAVAAVAQGLRQQMCSMVAAAAHGQSTGNATNPVASLVNSLAMAGRCGMPPTNGAPPMSMSHITSMRNMSSPAGSIQDLRISPAEFGMESPISSPLGLTVSSSMEPSINMSIGNNMDVGIGVSGMTYKPARPFESPRPENLFQEDIDDLVKPMHQSAGAHSKDAMAIKMEPMTECRGD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01121512;
- 90% Identity
- -
- 80% Identity
- -