Gpul011435.1
Basic Information
- Insect
- Gastracanthus pulcherrimus
- Gene Symbol
- -
- Assembly
- GCA_949152435.1
- Location
- OX424572.1:109437222-109451159[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2e-12 6.2e-09 37.8 0.0 1 39 320 359 320 363 0.90 2 4 1.6e-11 5e-08 34.9 0.0 2 39 375 412 374 415 0.94 3 4 2.2e-18 6.9e-15 56.9 0.0 2 45 430 474 429 474 0.97 4 4 2.6e-18 7.9e-15 56.7 0.1 1 42 481 523 481 524 0.97
Sequence Information
- Coding Sequence
- ATGGCTGATGGCTGCCGTtggctgctgccgccgccggtGGCGGTGGCCCGACTCGACGCGCCTTccgcgtgtTCCCTGCTGAAGACGGCGGATCAGCTGAAGATCAAGGGCCTGTGCGAGGTGCCGGAGAGCAGGGAGGGCCCCTCGGTGAGCCTGAGCTCGCCGCCCCGCGACTCCAGCACACCCCGGCTCAACTTCGCCAAGCTCAAGAGGCACCATCCGCGCTACAAGAGGCCGCGCACCTCCTTCGAGGCGGGCGGCGGCGGCCAGACCAGATCCAACACGGAGTCGCGACACCATCACCACCTCCATCATCACGAGAACGCCAAGTATAAGGACGAGGACTTCGTCGAGAGCTACGTGCGAGACTGCAACAAGGAGAATCGTCGAGACTGCTGGCCAGCTGAAGATGACGATTGCATGGAGACGACAGCGACGAGCACAACAGCAGTAGTCCTGGACTCGTGCCAGCGCGacaacaacaacagcagcagcgctAACAACAACGCCGCCGGCGGTGCAGCTACCAACAACAACGGTGACATGTTCTGTCACACAGGTCTCGGTCACTACGGCCACCATCCGGACCCGGGTGAGGTTGACCTGCCGCCCGAGACCCAGCCGACCCCGCCCAGCGCCACCCTCGTAGGCACCACCATCACCCACCTCAGAGATCCAGATCACCACACGGCAGACATCCAGAGTTGCGACAGCGTGAAGATCAAGTTCGAGACTCTGCACACGATGGACTCGTCGGACACGATCGACATCGACAGCCACATGTCCGACCGGGCGAGCGTCAGCTCAAAGAACGCCGACGACAACATGATGATGATCACGCCCGAGCTGCTGGGCCTGATGCCCTCGGGCAGCTCGGTGCACTCGGACTCGGGCGAGAACAACTCACGCAGCCACTCCGGCCAGTCGGGCTCCCATCACCACGGCTCCAAGTCCTGGACGCAGGAGGACATGGACGCGGCGCTCGAGGCGCTCAGGAATCACGACATGAGCCTCACCAAAGCCTCCGCGACATTCGGCATACCGTCGACCACGCTCTGGCAGCGGGCTCACCGGCTCGGTATCGACACGCCGAAGAAGGACGGCCCCACCAAGTCCTGGAGCGACGAGAGCCTGAACAACGCCCTGGACGCCCTGCGCACCGGCACGATCTCGGCCAACAAGGCCTCGAAGGCCTTCGGCATACCCTCGAGCACGCTCTACAAGATAGCGAGGCGCGAGGGCATCAGACTAGCGGCGCCCTTCAACGCCAGTCCGACGACCTGGTCGCCGGCCGATCTCGATCGCGCCCTCGAGGCCATCAGATCCGGACAGACGAGCGTGCAGCGCGCCTCCACGGAGTTCGGCATACCCACGGGCACGCTCTACGGCAGATGCAAGCGTGAGGGCATCGAGCTCAGCAGGAGCAATCCCACGCCCTGGAGCGAGGACGCGATGACTGAGGCTCTCGAGGCTGTCAGGTTGGGCCACATGAGCATAAACCAAGCGGCGATCCACTACAATCTGCCGTACTCGTCGCTGTACGGGCGCTTCAAGCGCGGCAAGTACGAGGAACCGGTGGTGAACGACATGTCGCAGGACGGCTCGTCGCAGCACTTTGTCCACCAGAGCCCGACCCAGAATCACTCCTCCTCGCTGCCCGACCAAATGCCGTACCAGGGCAGCTGA
- Protein Sequence
- MADGCRWLLPPPVAVARLDAPSACSLLKTADQLKIKGLCEVPESREGPSVSLSSPPRDSSTPRLNFAKLKRHHPRYKRPRTSFEAGGGGQTRSNTESRHHHHLHHHENAKYKDEDFVESYVRDCNKENRRDCWPAEDDDCMETTATSTTAVVLDSCQRDNNNSSSANNNAAGGAATNNNGDMFCHTGLGHYGHHPDPGEVDLPPETQPTPPSATLVGTTITHLRDPDHHTADIQSCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKNADDNMMMITPELLGLMPSGSSVHSDSGENNSRSHSGQSGSHHHGSKSWTQEDMDAALEALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALDALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPVVNDMSQDGSSQHFVHQSPTQNHSSSLPDQMPYQGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00304983;
- 90% Identity
- iTF_00463914;
- 80% Identity
- -