Gjac011412.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Gasteruption jaculator
Gene Symbol
tfip11
Assembly
GCA_949825005.1
Location
OX463765.1:16436615-16440140[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.8e-99 2.6e-95 319.8 16.1 1 275 394 661 394 661 0.98
2 2 0.0026 36 4.4 0.5 243 273 674 704 664 706 0.84

Sequence Information

Coding Sequence
ATGTCGGAAGACGAAGTGGAAAGCTTTGAAATCACCGATTATGACTTGGACAATGAATTCAATATCAATCGTCCTCGCAGAAAACTGTCGAAGAAGCAACAAATGCTTGTGCGGTTGCGCTGTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCAGCTCCGAAGACGAGGGGATAAACACCATGAGATCGCAGCAATCGTTCGCTCTGAACTTACCTGGGGAAATAGCTGGCTTACGGAAAAAGAAAGCTCCGATTAATCCATCGTTAATGAAAAGTGGAGTCGGCAGCTGGGAAGTTCACACTAAAGGTATTGGAGCAAAACTTTTACTTCAGATGGGGTTCGAGCCGGGTAAAGGTTTGGGAAAACAACTCCAAGGTATCAGTGCACCCGTAGAAGCTCATTTGAGGAAAGGCAGAGGTGCGATCGGAGCTTACGGCCCTGAGAAAGTTCCTAAGGTGCCCGATATAAAGAAAGACGAAGACAAAGAAGATGGAAAGGAAACTAAACACAAAGTGCCGCATTGGAGAAAAGGTGACGGATCGAGTACcaagaaaaaagtgaaatattgTTATCGAAGCGTAGATCAAGTGATCGAAGATGGCAAATTGAGACCGAATAGAAAAGCTCCTGTTTCGAGCGAAATGAGCAGAGTCAAAGTCATCGATATGACCGGTCCCGAACAAAGAGTGCTCAGTGGGTATCACGCGATAGCCAGTGGCCAGCAACGTCCCGACGAGACCGTTGTTACGACGGACAAGAAGACGACTGTGAACTTTGCTTTACCGGAATTGCAGcataatttgaatttactCGTGGACATGTGCGAACAGGATATCATTCAGAACGATCGGAAGACGAGATATTTGAACGACAGAGTGATCGCATTGGAAGCGGAGAAGAACAACTTAACGAAGATCGTAGACCACCACGGGCAGTTGATAAACACTTTGGAAAATGCACTATCGATACTTACCAGGTTAATGGAGAAATCGAGTGACCTGCAACTCGAGGATATGGCAAAagatttcaaagttttgcaAGATAAGTATTACGAAGAGTACAAAATGTACGAACTGGGTGATCTGGCGAGCAGTCTAGTGGGCCCTAAAATTAAGGATTGTCTGGCAACCTGGAATCCATTGATTCAACCCGGCCAGCCGTTGAAGTTATTTCaacaatggaaaaatatactCGAAAGTGGCATTAATACTCTGCACACAAGAACAATGAATCCGTACGACCAGCTGGTGTGGAATGCCTGGATGCCTTCGATGAGAGGAGCTGTGCAgcaaTGGGTTTGCAGGCGACCAGATCCATTGATAGAACTTATCGAATTATGGTTGCCCATGCTTCCGATATGGATAATGGAGAATATCTTGGACCTGTTGATACTTCCAAAACTTACGTTGGAAGTCGAAGAGTGGAACCCTTTGACCGATACCGTACCCATTCATACCTGGATACATCCGTGGCTTCCGTTAATgaGAGAGAGATTGGATACTCTGATATATCCAATAATAAGACGGAAACTCGGATCGGCATTAGGGGGTTGGCATCCATCGGATAGATCCGCAAGATTGATGCTCCAGCCATGGTCCCAAGTGTTCAGTAAAGGAGATATGGAAGCATTCTTAGTGAAGAACATCGTTCCCAAACTTCAGGTATCACTTTCGGATTTCGTCATCAATCCTCATCAGCAACATTTGGATCATTGGAATTGGGTGTACGAGTGGAAGGACATGCTTCCGATTCACATCATGGCTGGTTTGCTggataaattcttctttccGAAGTGGCTGCAGGTCTTGGCGTTATGGCTTAATCACAATCCGAATTACGAGCAAGTGACGAACTGGTATATGGGATGGAAAGGACTTCTTAGCGATAAGTTACTCGTTGAACCATTGATTAAAGaaCATTTCAAAAAAGCACTGGATATGATGAACAGAGCAGTTGCCACGCCACAAGGACACCAACCAGGTGCCATGGAACAAGTTTCATACTTAACAAGCTTAGAACGAACGCAGTTAACAATGCCGGTTCCTTCAATGGCTCAACCAAGAATAGAAAGACTCGCCGAAGCCGTACGTACAGCCTCGCAAATACCACAAGGCTTTAAGGACCTCGTGCAAAAGAAATGCGAGGAAAGGGGTATACTCTTCATGCCGATACCAAATCGGTACAGAGAAGCTAAACAAGTGTACAAAGTCGGTAATTTACAATCGTATATAGATGGAAATGTTTTATTTGTATGTCACAACGGCACGAACTGGGTACCCACACATTTAAACGCCTTACTTGACATGTGCGATACTTAG
Protein Sequence
MSEDEVESFEITDYDLDNEFNINRPRRKLSKKQQMLVRLRCSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSEDEGINTMRSQQSFALNLPGEIAGLRKKKAPINPSLMKSGVGSWEVHTKGIGAKLLLQMGFEPGKGLGKQLQGISAPVEAHLRKGRGAIGAYGPEKVPKVPDIKKDEDKEDGKETKHKVPHWRKGDGSSTKKKVKYCYRSVDQVIEDGKLRPNRKAPVSSEMSRVKVIDMTGPEQRVLSGYHAIASGQQRPDETVVTTDKKTTVNFALPELQHNLNLLVDMCEQDIIQNDRKTRYLNDRVIALEAEKNNLTKIVDHHGQLINTLENALSILTRLMEKSSDLQLEDMAKDFKVLQDKYYEEYKMYELGDLASSLVGPKIKDCLATWNPLIQPGQPLKLFQQWKNILESGINTLHTRTMNPYDQLVWNAWMPSMRGAVQQWVCRRPDPLIELIELWLPMLPIWIMENILDLLILPKLTLEVEEWNPLTDTVPIHTWIHPWLPLMRERLDTLIYPIIRRKLGSALGGWHPSDRSARLMLQPWSQVFSKGDMEAFLVKNIVPKLQVSLSDFVINPHQQHLDHWNWVYEWKDMLPIHIMAGLLDKFFFPKWLQVLALWLNHNPNYEQVTNWYMGWKGLLSDKLLVEPLIKEHFKKALDMMNRAVATPQGHQPGAMEQVSYLTSLERTQLTMPVPSMAQPRIERLAEAVRTASQIPQGFKDLVQKKCEERGILFMPIPNRYREAKQVYKVGNLQSYIDGNVLFVCHNGTNWVPTHLNALLDMCDT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-