Gjac005618.2
Basic Information
- Insect
- Gasteruption jaculator
- Gene Symbol
- -
- Assembly
- GCA_949825005.1
- Location
- OX463762.1:15860791-15864718[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 3.4e-12 3.8e-09 36.7 0.0 1 40 298 338 298 341 0.90 2 4 4.6e-12 5.1e-09 36.3 0.1 2 39 353 390 352 393 0.94 3 4 1.7e-18 1.9e-15 56.9 0.0 2 45 408 452 407 452 0.97 4 4 1.9e-18 2.1e-15 56.7 0.1 1 42 459 501 459 502 0.97
Sequence Information
- Coding Sequence
- ATGGTTAAATTCCATGACGAGAAGAAAAGATCCCTAGAGACTAATGAAATGCAAATTCCGATTTTCTTACAGTCCCTCTTGAAGACGGCTGATCAGTTGAAGATCAAGGGACTTTGCGAACTGCTGGAGAGCAGGGAAGGGCCAGCTTCAGTGAGTCTGAGCTCACCGCCGAGGGAACCCGGTACTCCCAGGttaaatttcacgaaattaaGGAGACACCATCATCCGAGGTACAAAAGAGCCAGAACGACGTTGGATTCGACGAACACAGATCCGTTACATTTCGACACGtacaaagaagaagaaagtgCCGGAGAGACGCTCATCAATCAGTGGGACAATACAGagAATCATAAAGACTGGCCAAACGAAGATGAAGAATGCACGGAAACTGCAACACCCACAGTAGTTTTGGAAAGCTGTCAGCGTGACAACAACAACGCGAACGttacaaacaataataataacgGTGACATGTTCTGTCATACAGGATTAGGTCATTACGGACATCATCCTGATCCTGGGGACGTAGATTTACCACCAGAAACACAACCTACACCTCCTAGTGCTACTTTAGTCGGTACCACGATTACGCATTTAAGAGATTCCGAGCATACGACAgaGATACAAACCTGCGACAgtgtaaaaatcaaattcgagACCTTACATACCATGGATTCATCCGATACCATCGATATAGATAGTCATATGTCGGATCGAGCGAGTGTGAATTCGAAAAACGTcggtgacaatgacaatatgaTGATGATAACGCCGGAGTTACTAGGTTTGATGCCATCCGGCAGCTCGGTGCACTCGGATTCGGGCGAGAACAATTCGCGCGATCACTCGGGTCACTCGAGTTCCCACCATCACGGCACGAAATCTTGGACGCAGGAGGACATGGACGCGGCATTGGACGCCCTGAGGAATCACGACATGAGTTTGACCAAAGCATCGGCTACATTTGGCATCCCGTCGACGACCTTGTGGCAACGAGCGCATCGTCTAGGGATCGAAACGCCGAAGAAAGACGGTCCCACCAAATCCTGGAGCGACGAGAGCCTCAACAATGCTTTGGAAGCTCTCAGGACCGGTACCATTTCCGCGAATAAAGCGTCCAAGGCCTTCGGTATACCTTCCAGCACGCTTTACAAGATCGCCAGAAGGGAAGGTATCAGACTGGCCGCACCTTTCAACGCGAGCCCTACCACTTGGTCACCCGCTGATTTGGACAGAGCTTTGGAGGCTATCAGATCCGGGCAAACTTCGGTCCAGCGTGCTTCCACTGAATTTGGCATCCCCACCGGTACACTTTACGGACGGTGTAAAAGGGAAGGAATCGAACTCAGTAGAAGCAACCCTACGCCTTGGAGCGAAGATGCTATGACAGAAGCACTCGAAGCTGTTAGATTAGGACATATGAGTATAAATCAAGCAGCGATACATTACAATCTACCTTATTCGTCGCTCTACGGCCGCTTCAAAAGAGGCAAGTACGAGGAACCAGTGGTTATTGAAATGTCGCAAGATGGTACGAGTAATCCACATTTTCATCAAAGCCCAACACAGAATCATTCGTCTTCGCTACCGGATCAAATGCCATATCAAGGAAGCTGA
- Protein Sequence
- MVKFHDEKKRSLETNEMQIPIFLQSLLKTADQLKIKGLCELLESREGPASVSLSSPPREPGTPRLNFTKLRRHHHPRYKRARTTLDSTNTDPLHFDTYKEEESAGETLINQWDNTENHKDWPNEDEECTETATPTVVLESCQRDNNNANVTNNNNNGDMFCHTGLGHYGHHPDPGDVDLPPETQPTPPSATLVGTTITHLRDSEHTTEIQTCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVNSKNVGDNDNMMMITPELLGLMPSGSSVHSDSGENNSRDHSGHSSSHHHGTKSWTQEDMDAALDALRNHDMSLTKASATFGIPSTTLWQRAHRLGIETPKKDGPTKSWSDESLNNALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPVVIEMSQDGTSNPHFHQSPTQNHSSSLPDQMPYQGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00304983;
- 90% Identity
- -
- 80% Identity
- -