Basic Information

Insect: Gandaritis pyraliata
Gene Symbol: -
Assembly: GCA_947859175.1
Location: OX401852.1:4099286-4106285[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 1.6 90 4.0 0.4 1 23 54 77 54 77 0.95

2 19 0.84 49 4.9 4.3 1 23 84 107 84 107 0.97

3 19 4.7 2.8e+02 2.5 3.9 1 23 180 202 180 202 0.97

4 19 0.0018 0.11 13.3 1.0 2 23 208 229 207 229 0.97

5 19 2.3 1.3e+02 3.5 1.5 1 23 235 257 235 258 0.94

6 19 0.21 12 6.8 2.9 2 22 491 511 490 511 0.95

7 19 9.7 5.7e+02 1.5 0.7 2 23 762 783 761 783 0.79

8 19 0.024 1.4 9.7 1.0 2 23 856 877 855 877 0.96

9 19 0.033 1.9 9.3 0.5 1 23 885 907 885 907 0.97

10 19 0.41 24 5.9 2.9 1 23 944 966 944 966 0.95

11 19 0.00026 0.015 15.9 4.0 1 23 975 997 975 997 0.99

12 19 0.25 15 6.5 1.1 1 23 1154 1176 1154 1176 0.95

13 19 0.84 49 4.9 0.0 2 23 1183 1204 1182 1204 0.97

14 19 0.0047 0.27 12.0 2.1 1 23 1272 1294 1272 1294 0.95

15 19 0.0021 0.12 13.0 0.5 1 23 1300 1322 1300 1322 0.96

16 19 0.0072 0.42 11.4 2.6 1 23 1411 1433 1411 1433 0.97

17 19 0.00018 0.01 16.4 1.4 1 23 1439 1461 1439 1461 0.99

18 19 0.31 18 6.2 1.6 1 23 1551 1573 1551 1573 0.95

19 19 0.00087 0.051 14.3 3.9 1 23 1584 1606 1584 1606 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	1.6	90	4.0	0.4	1	23	54	77	54	77	0.95
2	19	0.84	49	4.9	4.3	1	23	84	107	84	107	0.97
3	19	4.7	2.8e+02	2.5	3.9	1	23	180	202	180	202	0.97
4	19	0.0018	0.11	13.3	1.0	2	23	208	229	207	229	0.97
5	19	2.3	1.3e+02	3.5	1.5	1	23	235	257	235	258	0.94
6	19	0.21	12	6.8	2.9	2	22	491	511	490	511	0.95
7	19	9.7	5.7e+02	1.5	0.7	2	23	762	783	761	783	0.79
8	19	0.024	1.4	9.7	1.0	2	23	856	877	855	877	0.96
9	19	0.033	1.9	9.3	0.5	1	23	885	907	885	907	0.97
10	19	0.41	24	5.9	2.9	1	23	944	966	944	966	0.95
11	19	0.00026	0.015	15.9	4.0	1	23	975	997	975	997	0.99
12	19	0.25	15	6.5	1.1	1	23	1154	1176	1154	1176	0.95
13	19	0.84	49	4.9	0.0	2	23	1183	1204	1182	1204	0.97
14	19	0.0047	0.27	12.0	2.1	1	23	1272	1294	1272	1294	0.95
15	19	0.0021	0.12	13.0	0.5	1	23	1300	1322	1300	1322	0.96
16	19	0.0072	0.42	11.4	2.6	1	23	1411	1433	1411	1433	0.97
17	19	0.00018	0.01	16.4	1.4	1	23	1439	1461	1439	1461	0.99
18	19	0.31	18	6.2	1.6	1	23	1551	1573	1551	1573	0.95
19	19	0.00087	0.051	14.3	3.9	1	23	1584	1606	1584	1606	0.98

Sequence Information

Coding Sequence: ATGCTACAGCAGATGTCCTCGTCGCTGAGCGCGCAAGTCGGCGAGGTCATTACTGTTGCGCGCCCGTTCGAAGGTCGCTTCTCCGTGGACGTCTCTTCGGAGGCTTCCTCGGACGCGGCGGAGGAATTCGAACTACCGCAGTGCAAAATAAGAAGGAACTATAACTGTGCAAAGTGCACTTACAATACACAGAACCCGCGCGCTTATCTTGTTCACACGCGAGACGTTCATTTCGGAAGGTTTAAGATTTACGAGTGCCAACATTGTATTTATGCTTCGAGACACCAGCAGAAGCTCTTGAGGCATACAAAGATGGTTCACGGGACGACAACACCCTCGTCTTCCACGGCTCGAGCGGAGCCCGAAGCCGTTGCCGAGAGCGTAGAGAACATGGAAGATCTGCTTGAAGAGATCGAAGAGTGTGACGACTCTCAAGTGGAAATGGAGTTGGACGAGCAACCGGAGCGAGCAGACGATGCCGAAATGTGCTTACCTAGAAGCACCAACTCCGGATTGCCAAAGGGAAAAGGAAAATTCTTTTCGTGTGACAAATGCAACTACGTGACCCACATCAAAGCGAGGTACACGAAGCACGTCAAGTACCATTCCATGCCGATGATAAAGTGCACGATGTGCGACTTCCGGACCCCCTACAAGTGGAATCTCGATCGGCACATGAAGAACCACGGCGGCAGCGGGAGCTTCGTGTGCTCGAAGTGCACCTTCACCGCGGATATCAAGCAGAGCCTGACGGTGCACGAGATGAATCACCACACGCCGCCGGTCGGCCAGTCGGCGGCGAGTCGTCGTCGCAACCGCGTGGGAGCCAGCGACCTGGCCTCCGCCGAGTCGAGCGCGCTGCCCAAGGAGGAGGAGGGGAGCGGTGACTCGCGCTCCTCGCACTCGCTCTCGGACATCATGGGTTTGCAAGACGCGGAACGAGACATAGTAAGTTGCAACAGCGATTCCAACGACACTTCGTCACAAGTCAGCCCCGATGGGGATCAGTCAGTCCAGCATGTGTCCGGCCAACATTCCCCACGTTCAGGAAGCGAAGACAAGGCTCACAAGCAAAGCAAGAAGGCCCCCAGGCCTATCCCACAACTTATTCCCCTCAACACATCAACCCCCAACACGACCAAAGTCACCGGCGAACCGCCAGCGAAAAAGTTCAAAGAATCCACCAGTTCACATCTCAGCAACAAGTTCCAAAACCTGCCCGATGACATAACTTTAACACCAGTGAACAACACCCCAAAAGAAACAGTAGTCCGCAAGAAAAACGAGTCATTCTTCGACAAGTTGAAAGAAAGGTTGCTTACGGAAACCGGAGAAGAAGGCTCCTTGAAATGCAAAAACTGCGGCTTTGAGAGCAAGTGTCTATCCGAACATTCCGTGCACGAGAAGAACTGCGCGGCTCAAGCCAGCCGTGTCGTTATGAACACGTCGCATTCCACAATGGGCTCCACTCGTTGCCAAAACTGCAGACATCGCTGCAAATCCAGCGCAGACTTGTACGTACACATGCTCACTTGCGGCAAGAAACAAACCCCCCAACCTCCAACAGAAACCAAACGCGACAACAACGAGCCTTCCACTTCCAACAACGATAAAGACGCAGAACCACATCCCATGGAGAACGTAGTTTTCGTATGGAACAACATAAACCAAGGCAACAAATTCGAGAGACCTCTCGATATCAACATCAACGATGACTCAACAATGCCGGACGCGCAAAGAAATTACGACGCCGAAACCGTCGATGAAAACGAAAGTATGAACTTATCACCAAACAGTTTGAGTCTTGGAAAGAATGTTTACAAATGCTCCGAGTGCAAGTTCTGGGCTGCTACTGCTTCTAGGTTCCACGTTCATATCGTGGGTCACTTGAACAAGAAGCCGTTCGAATGCTCCTTGTGCAAGTATAAGTCTAACTGGCGCTGGGATATAACAAAGCATATCAAATTGAAGTCTGTGCGGGATCCGGAGCACAATGATGCTAAAGTGCTGATGACCGATGAAACCGGCCGACGGAACTACAGCAAATACAATAAATTCCTGGCTGTTCCAGTCCTAAACGAAAACGGTGAAAATGAATTCCACTACATAGATCAAAACACAACGGTTGATGCGTCGATGGAGATGGATGAGTCACTGAATGATACAAACGAAATGATGAACACCTCTTATGAAATGCAGCCGCTCAATCTACAGACTCAATTTGGTGATGTCAAGTACAACCCGATGGCCAACGTTGATAAGAAACCGAAGAAAACTATGTGGAAATGCAAAAAGTGCAATTATAAGGATCTGTCGAAGGATGCATTGCTGGATCACGTGAGGCAGCACTCCAAGGAGGGTGACGAGGCAGCTAAGAAGGCCGATGCTCCTGACCCGGCCGACCTGGCTTACCGCTGTGGCCACTGCAACCAATTGTCCAACTGGAAACACGTCATACAGAGGCATTGCCGTTTGAAACACGAAGGAATAATAAAAGTGATCACCACAGTGAAGCCCAAGCCCGACCCGGCCGCGACCGCAAGCGCCGCCGAGACCTTCAACGACTACTGCACCAAATGCCCCTTCCGCACCAACGACAAGAAACAACTCGTCGAACATCTACAGCAGCATCAACCATCCTCGCAGTCCATCTTCAAGTGCTACTTCTGCCCCTACTTCGTCAAGGACGAACAAGACTTGATCCAACATCTTCTGCTGCACGGGATAACCGATCCCGAGGAATACATCGCCAAAGCGATGGGGTGCAGGTCGCCCCTGCCCGAGGCGCTGATTCACGAGGCGCCGCCGGGCAGCGGCTCCAGCAAGCGGCACAAATGCCTCGAGTGCCCCTACGAGACCAACAGCAAGTCCCAGTACATGTACCACGAACAGTTCCACCGCACCACCTCCGCCGAGACCCCCTACAAGTGCCCCGAGTGCAACTACAGCGTCTCCAAGAGGCACCTGCTCCACCAACACCTGCGAGTTCACGGCATATTCCCTAAGAAAAACGAAACCGAGGCTGAACTAGAAGCGTTCACCTCCAACCAAAAAGACAAATCCGACGGCTTCAGTGAGGAGATCCCCTTCGTGTGGGTCTCGGCGAGAAATGAATTCCATAAAATGTACAAGTGTCGGTATTGCTCGTACGTCAACTCTCAGAAGTGTAAGATCCCCAACCATGAGAAGATCCATTGCCTCTGCTTCGAAAATAGCGACATGATAATATACAAGTGTTTAGAATGCAAGTTTTCGTGCGATAACGCAGTGAGGCTGGCGGAACATTGCAAGAAGCATGGCCTCTTGTACGGTCGCATCTACAGCATGGTCGACGAGGACGTTCCCGATGAAGACCAAATAACGAGACTCCGCAGAGCTATCGACCTCGAAAAGAACTCTGTGGGCGAAGACGCAGCAGTGGAAAATACGCCCTCTGATTCTAAAGAAATTAAAATATTGTACTTTTGCCAGAAGTGTCCAGCTAGATATTTTGTTGAAAGTGAACTAAAAATGCACGAAAAATTTCATGACCTAACAAATGCAAATAAGTGTAAGAACTGCGAATTCTCAGTCCCGGAAGAGGCTGATCTAGTGGTGCACCTCGCTGTTCATTCTGATGAGCACCACATAAGGTCAAACATGCTTAAATTTATTCACAATTCACACTCTCTTTATAAAGAACCTAAATTAGAAGCGAATCGTAATCCTGACTCCTTAGACGTCAGTTGGTCTGTTGCAGTCAATTACAAAACCAATGAAAATACGGAGCCCCACCACAAGAAACCTTCAGATACGAAACATTCTCCCAAACAATACTGCTGCAAGGAGTGTCCAGCCAAATTCTTCAAAAGTTCTGCACTCACATACCACATGGGACTCCATGGAGGCGAAGGGGACTACAAATGTAAAAAGTGCAGCTACTCTGTCAAAAATGTTGGCAATTTAGCTAAACATGAGATATTACACGAAAATGATAAATCAGCAAATTGCGAATATGAATCTGGTGATGATTTAGATTTTAAAAACATTCCCCTCTCAGGAACAGACTTGTTTCAAAGGAAGACTGAAGCTCAGAAAAGAGTATTAACCGATAAAGACAAACTGGTCAAGCCGAATGATCATTTTCCACCTGTGCTCCAGGCGGATCCACAATTTGGATATCTGATGCATGGCAATCCCGAATTTATCTATCCCACGTATCTGAAGAACGGCCGTCAAAAAGAGAAAAGGTACAAATGCCATAAGTGTCCCTCAGCTTTTGAAAAGCGTGAACAATACAAAATACATTTATCGCTCCACGGCTCCAAGCAGAGATATAAATGCGAGTTATGCGACTACTCTGTCAAATATTACGCTAACTACGTACAACACATGCGAAAGCACCAAATGAATGATGAAGCCCAAGCCGAACGGATGAAAGGAAGCAACGGTGAGCCGGAAGGTCTCGAAGACATTAAACAAGAAGATAGTGCAGACAACATCAAACTCGCGATCAAAACTATGCCCAAGGGTACACCTAAGACAGACTTCCAACAGTTCTCAATAAGAGACCAACAAACCCTTCGGCTGTTGCAACTTAGGAGATCCATGAATAACAATGGCAAGGATGCAGCGACTTCCGATAACTTGCCTGTGAAGGAGCGCAAAATGCACATTTGCCTTCTTTGCCCGTATACGAATCAACGGCAAGATGCTTTGAACAATCATTACAGAAGACATGATGAAACTGATATTTTCCACAGTGGCAGTCATAAATGCTCATACTGTGACTTAGTAGTTGTGCAATCTCATTTCCTAAGGGAGCACATGAAAACTCACTTCAATTTTAACAAGATTCTTACGCCAGAATGCTTTGTAGCGAATGATGATGTTAGTTTTACGATATCTAAAGTAGATGAAGAAAGTGAACCAATTGATCTCAAATTAGACATGAAAAATAAGATTTTACCATGCAATGATGAAAAAATATTTGTTAAAATTAAGACAGGAGAACTTGTAGTTGAGTAA
Protein Sequence: MLQQMSSSLSAQVGEVITVARPFEGRFSVDVSSEASSDAAEEFELPQCKIRRNYNCAKCTYNTQNPRAYLVHTRDVHFGRFKIYECQHCIYASRHQQKLLRHTKMVHGTTTPSSSTARAEPEAVAESVENMEDLLEEIEECDDSQVEMELDEQPERADDAEMCLPRSTNSGLPKGKGKFFSCDKCNYVTHIKARYTKHVKYHSMPMIKCTMCDFRTPYKWNLDRHMKNHGGSGSFVCSKCTFTADIKQSLTVHEMNHHTPPVGQSAASRRRNRVGASDLASAESSALPKEEEGSGDSRSSHSLSDIMGLQDAERDIVSCNSDSNDTSSQVSPDGDQSVQHVSGQHSPRSGSEDKAHKQSKKAPRPIPQLIPLNTSTPNTTKVTGEPPAKKFKESTSSHLSNKFQNLPDDITLTPVNNTPKETVVRKKNESFFDKLKERLLTETGEEGSLKCKNCGFESKCLSEHSVHEKNCAAQASRVVMNTSHSTMGSTRCQNCRHRCKSSADLYVHMLTCGKKQTPQPPTETKRDNNEPSTSNNDKDAEPHPMENVVFVWNNINQGNKFERPLDININDDSTMPDAQRNYDAETVDENESMNLSPNSLSLGKNVYKCSECKFWAATASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSVRDPEHNDAKVLMTDETGRRNYSKYNKFLAVPVLNENGENEFHYIDQNTTVDASMEMDESLNDTNEMMNTSYEMQPLNLQTQFGDVKYNPMANVDKKPKKTMWKCKKCNYKDLSKDALLDHVRQHSKEGDEAAKKADAPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHEGIIKVITTVKPKPDPAATASAAETFNDYCTKCPFRTNDKKQLVEHLQQHQPSSQSIFKCYFCPYFVKDEQDLIQHLLLHGITDPEEYIAKAMGCRSPLPEALIHEAPPGSGSSKRHKCLECPYETNSKSQYMYHEQFHRTTSAETPYKCPECNYSVSKRHLLHQHLRVHGIFPKKNETEAELEAFTSNQKDKSDGFSEEIPFVWVSARNEFHKMYKCRYCSYVNSQKCKIPNHEKIHCLCFENSDMIIYKCLECKFSCDNAVRLAEHCKKHGLLYGRIYSMVDEDVPDEDQITRLRRAIDLEKNSVGEDAAVENTPSDSKEIKILYFCQKCPARYFVESELKMHEKFHDLTNANKCKNCEFSVPEEADLVVHLAVHSDEHHIRSNMLKFIHNSHSLYKEPKLEANRNPDSLDVSWSVAVNYKTNENTEPHHKKPSDTKHSPKQYCCKECPAKFFKSSALTYHMGLHGGEGDYKCKKCSYSVKNVGNLAKHEILHENDKSANCEYESGDDLDFKNIPLSGTDLFQRKTEAQKRVLTDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERMKGSNGEPEGLEDIKQEDSADNIKLAIKTMPKGTPKTDFQQFSIRDQQTLRLLQLRRSMNNNGKDAATSDNLPVKERKMHICLLCPYTNQRQDALNNHYRRHDETDIFHSGSHKCSYCDLVVVQSHFLREHMKTHFNFNKILTPECFVANDDVSFTISKVDEESEPIDLKLDMKNKILPCNDEKIFVKIKTGELVVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01220230;
90% Identity: iTF_00633248;
80% Identity: -