Gpyr011741.1
Basic Information
- Insect
- Gandaritis pyraliata
- Gene Symbol
- -
- Assembly
- GCA_947859175.1
- Location
- OX401869.1:7301881-7304556[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.9e-12 2e-09 37.2 0.0 2 37 16 51 15 54 0.94
Sequence Information
- Coding Sequence
- atggttcgaacctatgttagaaaaactgaccaaggtcagtggtctcaggaagatatgaaaaaagctgcagaaaaagttttgactaaacaactgactatacgaaaggcagctgacaagtatcatgtgccttataccagtttgcatagaagagttactttctcccggggtgttatcaagaatcgaggcggtcaacaaacaatggacaagggtattgaagataatttttctgatcgattgttacatttagctagtcgtggcttcggcataactccaaaacgcgttcgtaagtacgctttttcttttgtcgaacgccaaaatgttaagcataacttcaacactgaagctcgtatcgccggagaagattggtttcATCGCTTTATGAAAAGAAACCCACACTTGAGCATTCGCAAACCAGAGGGGCTGTCCAGAGCAAGGATTAATGGTATGAAGAAGGAAATAGTTGCAGAATTTTACGAAACTTTAGCTAAAGTGGTGGACGATAACGACTTGAGAGGAAAACCTGAATGTGTTTACAACATGGACGAAACTGGGGTCCCACTTAATAACCGTCCGCCTAATATTATAGCACAGAAAGGATCAAAAGATGTGGTTAGTATGACAAGCGTGGAAAGAGGACAAAATGTGACAGTTTTAGCCTGTATGAATGCTGCAGGACAGTACATTCCACCGTTTGTACTCTTTAAAGGCGTGCGCAAACGCGATGATTTCATGTTGGGAATGCCTTCGGGTACAGAAATTGCCATGACAGAAAAGGGCTGGGTCACAGAAGAAGCATTCAAGCTATGGCTGAAACATTTCAATAGATACCGGACTCAGGGAAAAGTCATTTTAATTTTGGATGGTCATTCAACTCATAGAAGCTTTGATGTGGCTGATTGGTGTGAATCTATGGATATTGAACTTGTGCTGCTTCCTGCGCATACATCACATGCCCTCCAACCACTGGATGTATCTTTCTTCAAACCACTCAAAACTTACTACAACCAATATGCAACAGCATGGCAACACGCACACCCACACCAGGGAATAACCAAAGTTGCGTTTGGTGGTTTGTTAAAACAAGCTTGGAACCAATCTGCAACAGTTGGGAATGCAGCCAAAGGCTTTGAGAAGACAGGAATATTTCCTCTTAATCCCAATGTAATCCCAGACCATAAGTTTATTGGGGACACTGTGGACCAACTTGACTCAGTTGAAGCTAATAGCCCAGTTCCTTCCACGAGTGCTCAACCCACTCCTTCAATGAGTGCTCAACGAGCTGTCATTCCACAAGAGGCAGAACCACACCAAAACCAGATCGAGAATGTCGTTAAAGAAATAATTCCTTCTCCGCTGAAGAGCCCTGTAGTAACCAAAAAACCTCGCCAGGTTACTAAACCCATTTTGCATTTAACCTCCCCACAAAGCATGGACATTCTTCGTGTAAAAGACTCCAAGAAAAAAGCTGAAACAGAAAAGAAGAAATCTAAAGTAGAAGGAAAATCAAAAGGCAAAGAAAATATGACGGTTAAGAAGAAGAACAAAGCTACACCTGGACTGAAACTTCAAGAAGATTTTAAATCAATGTACCCCGGGAAAGAGAACAGTCTATTCTCTATGCTTGATCTGAAGAAAGAAGAAATAATAGACTACGCCAAACAAAAAGCTCGACAAAGTAGAGATAAACACTACTCCTCTACTTTATTACATTTAATTGGCCTGATCCAGGGTAAGTAG
- Protein Sequence
- MVRTYVRKTDQGQWSQEDMKKAAEKVLTKQLTIRKAADKYHVPYTSLHRRVTFSRGVIKNRGGQQTMDKGIEDNFSDRLLHLASRGFGITPKRVRKYAFSFVERQNVKHNFNTEARIAGEDWFHRFMKRNPHLSIRKPEGLSRARINGMKKEIVAEFYETLAKVVDDNDLRGKPECVYNMDETGVPLNNRPPNIIAQKGSKDVVSMTSVERGQNVTVLACMNAAGQYIPPFVLFKGVRKRDDFMLGMPSGTEIAMTEKGWVTEEAFKLWLKHFNRYRTQGKVILILDGHSTHRSFDVADWCESMDIELVLLPAHTSHALQPLDVSFFKPLKTYYNQYATAWQHAHPHQGITKVAFGGLLKQAWNQSATVGNAAKGFEKTGIFPLNPNVIPDHKFIGDTVDQLDSVEANSPVPSTSAQPTPSMSAQRAVIPQEAEPHQNQIENVVKEIIPSPLKSPVVTKKPRQVTKPILHLTSPQSMDILRVKDSKKKAETEKKKSKVEGKSKGKENMTVKKKNKATPGLKLQEDFKSMYPGKENSLFSMLDLKKEEIIDYAKQKARQSRDKHYSSTLLHLIGLIQGK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01339949;
- 90% Identity
- iTF_01339950;
- 80% Identity
- -