Basic Information

Gene Symbol
Kdm5
Assembly
GCA_947859175.1
Location
OX401850.1:8959941-8972462[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.7e-17 2e-13 50.7 0.0 16 89 1032 1104 1016 1104 0.82

Sequence Information

Coding Sequence
ATGTCTGCATTTGAAGTTGATTTGGAGAAAATCCGTAAAGCATTGGTTGATAACTGTTCTGAAATAGGCAAGGTGTATCATGGTGTAGCTACTCATCTGATCGATATTCAGAACTTCTATATAGTTCCATTAAAACTTCATGACCTGCTTCCAATGATAGAAAAACCAGGAGTGAAAGCAGAAAACATTGAGCAATTGGATGATGTAGTTTACTATTCGTCCACTCTAAAACAATTTGCAAGAGGAACCATAAGAAGTGTGGAACCAAATGGGAAATGCATTATATTTGCTAAAGATTATGGAGTGGTGGACACAGAGAGTTCTGATAACATCTATAAGATGTTGCATCAAGAAGCTGAACAATTACCAGGATTTGCACAGTTGTGTGAGCTGGCTATGTGTTTCCCTTGCGTGGGTGGCCAGTTCACAGAAGAGAATGTTGAAAGTTTCAAGTTCTTCATGGGGCAGCCAGAGAGTTCAAAGAAGGAAACTAAGAAAAGCCACAACATGGGGAAAACCAAGAAAAGGCTGCAAGCCCAACGAAAATTTGCTCAGGGGGCATATGTTCCCCCCATAAATAATACATCTACAACTTCAGCGCCCATTATGAATGCATCTCACAAGGCTGTCAATGCACCTGGTCCTGTCATTATTAACCACAATAGTGCAAGAGATATATTTACACAGATGACTATGGGAAGAGCTCACCCACATATTGACTGGCCAGTAAAGTTGAAGTATGATAGCGGTTTATCATCAAAACCTCTAGAAATAAATACAAGAAAAAAGTTAAAGGACAAAAAACCAACTAGAGTCGGTAATTTAAAAAAAAAGTATGTGCTACGTAATAATCAAAAAGTCGCAGCTTATCCACGCCGCCTCAGCGTTACTGACAGTGAAAGTGACACACCACTGAGCAGTTTATCCACCAAAATTGTCAAGGAAAAACTTGAAGACACAGAATCACCACCATTCTCGGGGGAAACGCACCGTCAGAGGCGAAATATACCATCCTACAGTGACCCTAACTTCTCGTACAAATCGCCAGACACTTCTGCAGTACCTGGTTGCAGTCTGCATGACGGAGCCACAGAAAAAGATAATTTGGTTCATAGCTCTATAGCCCTATCTGATTTCGCTACAAAGTCGCATCTTAAGAAAGCTAAGAAAAGAAAGACCTTGAATAAAAATAAAGCTAATTTAAAACTAATTAAAGCTAAATTGCCGAAATACGTCGAAACTGCTTTTTCAGATGTTCAAGTAAAGAGCCCTGCACCACTCAAAATTGAAGAGGTAGATGCGGTATGCACAACTTTTTCACCAAATATGCAGGGTTTTACTGTGGTTAGTCCGAAAATCTCGCCATCGCTTCTTGATGACAGAATAGAAGAATCAGACGTGCCATACGAAAAAACTGCTGAATGGGTCAGAACTCACCATCAGTCTGGCGTCTATTCAACTGCTGTGGACGAAAGTAATGCAACAATTGCTCAGACCAGCGAAAAAGTTCTAGAAGACACCAGTTTATCTACCCTTCACTCTAATGACATACCAGTGACTATATGTACACAAAATGATGATGCAAGCAGCTTGACTGTTTTGGGAAGAAGATTAACAGCCCTTGAGAGTTACATGTCATTAGCTCCAAATAAAGGTGAATCAACAGTAACTGCTCCAGGCAGCAGTAGTCCTTCTCTTAGTATCTCGGATCCCGATGCACAAGTAAGCGACAATTACTTTAAAATTCCTGATTTACCGGTGCGTTTCACTAAGCGGAATAAGAGTATGAATAGTTGTCCTACTCGATTGTTTGATACACTCCATACCTTGCTAAATGGTCAGTCAGCCGAAAACGAATCCAGTTATTGTAACATTTGCAAGCGCTGCGAGCTATTGAGTAAATACAGAAAAGTTATAAAACTTTTACCAGTTAGCGATGCTAATGAACCAGACATTCTAGATATGAAACCGAACGACGTCTACAATTTTGACTCTGATGAGGGTGGACTTAAATTCCTAAGACGAGGTCGAGAACTCGTCCGCAACGTGCTCACTACAAAAAGGTTCCCAATATGGCTGAGCAATTTGGAAATGAACTTGAAGAAAACTATGTTTCAAGATGAACACAAGCTTGGAACATTGAAAAGAACTTTAGTATTTGATAAGGATGATGTTTTAGATGAAATGGTGAATAAGGTTATTACGCGAGTTGACTATTTGGCTCGGTGCATCGCCGAAGATAAAAAGGAACTAGATAAAGAGTCGTCTAGGCGGAGATTGCGGTCGGCGAAGGTGTCGCCACTTGGCGGACAGAAGAAAATTTCGCGGTCGAAGAAATTGGCTCCTCGTAGGAAGCAGGCCTCGACGGGGGCACATGCAAAACCCGCTCGCCCTAAGCCGCCCGCTGCGCTTGACCCAGAGCGTGATACTCCCACAGGAACCTTTCTCAATTCAAGAGATGTTGAGCCACGTCGTATGGTGCTCTGTTTGACACCCGTTGAAAAAATTATAAAACAATGTGGCTTAGTCCAAACACTTAACGCGCTACCGCTAGACGAGAAAAAACTGATTCCTGATAAATTAAAAATTAGCCAAACTTCACATACTCCAAAAGTTGGACAAACCTCTGTGAGCCAACAAAAAGTGAAGGAAAATACTACAAAGGTCCGTAAGTCAAGTATGGATCAAACTTGTGGGGCCTCCAAAGGCGCCGACACAGACGAAGAACCAATACATTTTGACTTTCCATTTAACAACGATTTTCATCGAGCTTCCAGCTCTCTACGCCGAAATACTCAAAATGTACCACCTTCAATCCAGTCGTCGGAAGCATTGCTTGTGTTCAGACCTACGCCAGAAGAATTCAAGGATCCAATGGGGTACATTGAAAAAATTAAAGAAAATGCGCGGATATACGGCATTTGCAAGATTATTCCTCCAAAAGGTTTCGATGTTCCCAGTCATCTGGACGATAGCGTCAAGTTCACTACAATTTCTCAGTATCTGGGTCGCCTGTACCACCGCTGGGGACCGACGTCACGAGAGATGGCTATTATACAAACGTATGTCGCTATGCTTGCAAATACTAGGGAAAGAGACCAGTTCACCAAAGCTCCATTGTTTGACGGTGTAGAACTGGATTTGGTGAAATTGTATCATGTTGTCGTTGAAGAAGGAGGAATTGAAAAGATGTTGGCTGACAGCGAGAATTGGACTGTCGTAGCTGAGAAGATGGGCTTTGCCACGTCTCGTAGCAAACCTGATTACAAGAAACTTGAAAAGCTGTACTGCAAACATGTGCTACCGTACGAGTCTTTATCACATCACGATCGCCAAAAAATCCAAGGGAAGGTGGACAAAGTGTGGGCCGAACGGGCTAAAAGCATGATGCGTCGCGTTCAACGGCCGCTGCATTACCAACAGCGCGTCCTTGGCGAGACGAATTCTGATGACGAAGACGAACTATGTGTCGACCCTGACATCGAGGACGTAAGGATTGCAGGCAAACAATGCTTTGATCGCATAGAGGAATGCACTGGAAAGGGACGCCCTATGAACCTCGCTACATACCGTCGGATTGCCGCCTATCTAAAAGAAATGCGATTTCCAAACGGGCCGGAGCCCACTACCCTTCAAATAGAGGATGAATACTGGAGCATCGTGACGTTAGGAAAGGAGCACACAGGAGTGTTATCGGCGTTCATAGACACATCGGTCAAAAACCTGGGCCACCCGAGCAACCCCAATGAACCCGGAGGCAGCCATCCATGGAACTTAAAGCGTCTAACCGAGAATCCGGACAACATTCTAAGCTCTCTCGGCAAGTCGCTGAGCGTGACGGTTCCGACGTTGTGTCTCAATCAGCTGTTCAGCACTAATTGTTGGCACATGGATCCGCACCAGCTCGCTTGGATGGATTACATGCACGAGGGACCCACCAAAATATGGTACGCAGTAGCAGAGCGCGACGCTGCCGTGTTCCGACGCGCGATGCTAATGCTTGTACCTGCTGTGGTGCAGCACAAAGGCATCTGGCTCGCGTCCGACACGACGATGGTCCCTCCGAGCGAGCTCATCGCGCACGGCGTGCAATTGCAACGCGTCGAGCAAAACCTCGGAGAGTACATAGTTGTGTTCCCCGGTGCTTACGCCTCATCCATCGCCACAGGCCTCACGATCTCAGAAAGCATCTACTTTGAGAACACGTCCTTTCTGGCGAGGCTTGATACTACGTTCTTGCAAATGCGCGTCGACTGCGAACCGGCGATGTTCTCAAACACGTTACTCTTGATGCGAATGGCGAGCGACCCCGCCGTCAGTGACACCGTACTGCCGCGCGTTCTTTATCTACTCAAGGAAATGTACAAAGAAGAATTTGATGCGCGACGAGAGGCTCAAGAACTGAAATGCAACATTATCGTGGATAAGGGTCGGGGAGATACAGCCCAGTGGCCAATTTCGTGGCCATACCAGGAAGAATGCACCATCTGTCGCGTTCCACTCATACTTTCCAAGAGCACGCGATACAACGAGTCACGTTCACTAATGTGCCTGAAGCACGCGTTACGCGTCTACCGCTGTGCGCCTGCAGAGGAGAAGGCGCAACCGCCACCTGTCACGTTACTCTACTCGGCGGTCGAACTCAATGGAATCGTGCTGGCGCTCGAACGACGTATCCTTTCCTCTTTACCGAACGCTACAGAATTACAGAGGAATCATCATCATTTCAGCCAGTTTGCACCAACTGCTCAGTATAAGCCTCCTCTTTGTTACGGCTTTCTTTCCGGTCCCTTGCGAGTCTTAGCTATTGATTTCCACCATCTCCGCTAA
Protein Sequence
MSAFEVDLEKIRKALVDNCSEIGKVYHGVATHLIDIQNFYIVPLKLHDLLPMIEKPGVKAENIEQLDDVVYYSSTLKQFARGTIRSVEPNGKCIIFAKDYGVVDTESSDNIYKMLHQEAEQLPGFAQLCELAMCFPCVGGQFTEENVESFKFFMGQPESSKKETKKSHNMGKTKKRLQAQRKFAQGAYVPPINNTSTTSAPIMNASHKAVNAPGPVIINHNSARDIFTQMTMGRAHPHIDWPVKLKYDSGLSSKPLEINTRKKLKDKKPTRVGNLKKKYVLRNNQKVAAYPRRLSVTDSESDTPLSSLSTKIVKEKLEDTESPPFSGETHRQRRNIPSYSDPNFSYKSPDTSAVPGCSLHDGATEKDNLVHSSIALSDFATKSHLKKAKKRKTLNKNKANLKLIKAKLPKYVETAFSDVQVKSPAPLKIEEVDAVCTTFSPNMQGFTVVSPKISPSLLDDRIEESDVPYEKTAEWVRTHHQSGVYSTAVDESNATIAQTSEKVLEDTSLSTLHSNDIPVTICTQNDDASSLTVLGRRLTALESYMSLAPNKGESTVTAPGSSSPSLSISDPDAQVSDNYFKIPDLPVRFTKRNKSMNSCPTRLFDTLHTLLNGQSAENESSYCNICKRCELLSKYRKVIKLLPVSDANEPDILDMKPNDVYNFDSDEGGLKFLRRGRELVRNVLTTKRFPIWLSNLEMNLKKTMFQDEHKLGTLKRTLVFDKDDVLDEMVNKVITRVDYLARCIAEDKKELDKESSRRRLRSAKVSPLGGQKKISRSKKLAPRRKQASTGAHAKPARPKPPAALDPERDTPTGTFLNSRDVEPRRMVLCLTPVEKIIKQCGLVQTLNALPLDEKKLIPDKLKISQTSHTPKVGQTSVSQQKVKENTTKVRKSSMDQTCGASKGADTDEEPIHFDFPFNNDFHRASSSLRRNTQNVPPSIQSSEALLVFRPTPEEFKDPMGYIEKIKENARIYGICKIIPPKGFDVPSHLDDSVKFTTISQYLGRLYHRWGPTSREMAIIQTYVAMLANTRERDQFTKAPLFDGVELDLVKLYHVVVEEGGIEKMLADSENWTVVAEKMGFATSRSKPDYKKLEKLYCKHVLPYESLSHHDRQKIQGKVDKVWAERAKSMMRRVQRPLHYQQRVLGETNSDDEDELCVDPDIEDVRIAGKQCFDRIEECTGKGRPMNLATYRRIAAYLKEMRFPNGPEPTTLQIEDEYWSIVTLGKEHTGVLSAFIDTSVKNLGHPSNPNEPGGSHPWNLKRLTENPDNILSSLGKSLSVTVPTLCLNQLFSTNCWHMDPHQLAWMDYMHEGPTKIWYAVAERDAAVFRRAMLMLVPAVVQHKGIWLASDTTMVPPSELIAHGVQLQRVEQNLGEYIVVFPGAYASSIATGLTISESIYFENTSFLARLDTTFLQMRVDCEPAMFSNTLLLMRMASDPAVSDTVLPRVLYLLKEMYKEEFDARREAQELKCNIIVDKGRGDTAQWPISWPYQEECTICRVPLILSKSTRYNESRSLMCLKHALRVYRCAPAEEKAQPPPVTLLYSAVELNGIVLALERRILSSLPNATELQRNHHHFSQFAPTAQYKPPLCYGFLSGPLRVLAIDFHHLR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00632549;
90% Identity
-
80% Identity
-