Basic Information

Gene Symbol
Kdm5
Assembly
GCA_932527285.1
Location
CAKOBM010000020.1:5645197-5654664[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.2e-16 2.7e-13 50.4 0.0 16 89 859 931 843 931 0.82

Sequence Information

Coding Sequence
ATGGGGAAAATCAAGAAAAGGCTGCAAGCTCAGAGAAAATTTGCTCAAGGAGCATATGTTCCCCCGATAACTAATACATCTACTTCAACCCCTGTTATGAATGCATCCCACAAAGCTGTGAATGCACCAGGTCCAGTGATTATAAACCACAGCAGTGCAAGGGACATATTTACACAGATGACTATAGGAAGAGCTCACCCACATATTGACTGGCCAGTGAGATTGAAGTATGAAAGTGGCTTACCATCAAAACCTCTGGAAATAAATACAAAAAAAAAGTTAAAAGAAAAAAAGTCAAACAAAGTCAGCAATTTAAAAAAAAAGTATGTGCTGCGTAATAACCAAAAAGTTTCGCCTTATCCACGTCGTCTCAGTATCACAGATAGCGAAAGTGACACACCATTAAGTAGCCTGTCTACAAAAATATTCAAAGAAAAACGTGAAACACTTACTCCACCATTGCCAGGAGATAACCAGCGTCAGAGGCGGAATATACCACCTTACAGTGACCCTAACTTCTCATATAAAACGCCAGACACTTCAGCAGTTGGGTGCAGTTTTTATGATAAAACCACAGAGAAAGATACTCTGGGTTCTAGCACTATAGCTGTATCTGACTGCACCATAAAATCAGGTCAAAAGAAAGCCAAAAAAAGAAAAACCTTGAATAAAAATAAGGGAAATATAAAAATACATAAAAACAAATTGCCAAAATATGTGACAGCTTTTCCAGATGTGGAAACAAAAAGCCCCGCGCCAATAGATGAGGCAGATGCTGAATGTTTTGCTATTGCATCAAATACATTGGATTTTACTGGGGTTGATAGTCCAAATGTGGACTCACCATCACTCCTTGATGGCCAGATAGATACAGATTCCATGCTAAACGTGCCTTACGAAAAGACGGCTGAATGGGTCAGAACTCACCACCAATCTGGTGCTAGTGTTTTCGATCCAACTGCTGAAGAAACTTCTACAACCCGGCCTAATAAAAAGACATTTCTAGATAACATCAGTTTATCTCCCCCGGATTCTAATGGTACACCTGTCACTCTATGCACTCAGAATGATGATGCAAGCAGTTTAACTGTTTTGGGGAGAAGATTAACAGCACTTGAGAGTTACATGTCCGCTCCAGATAACAGTGAATCAATAATGAATGCACAAGACAGTAACAGTGACACTTCTACAATACCTAGTATCTCAGATCACGAAGCACAAGTAAGCGACAACTATTTTAAAATTCCCGATTTGCCAGTGCGTTTTACTAAGCGGAATAAGAGTATGAATAATTGTCCTACTCGCTTGTTTGATACACTTCAGACCTTGCTAAACAGTCTGTCCGTTGAAACCGAATCTATTTATTGTAACATTTGCAAACGCTGCGAACTGTTGAGTAAATACAGGAAAGTAATAAAACTGTTACCAGTCAGCGATCCTAACGAACCAGACATTCTAGATACGAAACCAAACGACGTATACAATTTTGACTGTGATGAGGGCGGACTCAAATTTCTAAGACGAGGTCGAGAACTAGTACGCAACGTGCTCACTACAAAAAGGTTTCCGATATGGCTAAGCAATCTTGAAATGAACTTGAAGAAAACTATGTTTCAAGATGAACACAAACTTGGCACATTGAAAAGAACATTAGCTTTCGATAAAGATGATGTTTTAGATGAAATGGTGAACAAAGTTATTACGCGAGTAGATTATCTGGCTCGGTGCATCGCTGAAGATAAAAAGGAACTCGATAAAGAGTCGTCTCGGCGTAAATTGCGATCGGCGAAGGTTACAACACTTGGCGGACAGAAGGTGTCACGACCGAAAAAATCGCTTTTTCAAATCAAGGAAGCCTCGGTGACTCTCGCTAAACTCGCTCTCCCTAAACAAAGCACTGCACCCATCCTCGATACTCTCACAGCGGCCCTCCCACGAGATGTTGAGTCACGTCGTATGGTTCTCTGTTTGACACCAGTTGAAAAAATTATAGAACGAGGTTGTTTGTCCCAGACATTTCACGCGCTACCTCTGGACGATAAAAACCTGAGTACCATAAAGTTAAACATCAACCAAACTTCACAAACTCTAAAAATAGAACAAAACTCTCTGAGTCAACAAAAAGTAAAGGAAACTGCACCTAAGGTTCGAAAGTCAAGTTTTGATCGGACCTCGACTTGCGAGGACTTTAAAAAAGATAAAGCCCCAGAGATAGAACAGGCACAGTTTGATTTTCCATTCCATACCAATTTGCACAGAGCTGCAATGCATACCGCTAAGAATAAACCACTTTCGATCCAGTCATCGGAATCATTGCTTGTGTTCAAACCCACACCAGAAGAGTTTAAGGATCCAATGGCGTACATTGAAAAAATCAAAGAGAATGCGAGGACATACGGCATTTGCAAGATAATTCCTCCAAAAGGATTCGATGTGCCCAGTCAACTGGACGACAGCGTCAAGTTCACGACAATTTCACAGTATCTAGGACGTCTGTACCACCGATGGGGGCCGACATCGCGAGAGATGGCTATTATACAAACCTATGTTGCTATGCTTGCCAATACAAGGGAGAGAGATCAGTTTACCAAAGCTCCATTGTTTGATGGAATTGAATTGGACTTGGTGAAATTGTATCATGTTGTCGTTGAAGAAGGAGGTATAGAGAAGATGTTGGCTGACAGCGAGAATTGGACGGTCGTAGCTGAAAAGATGGGCTTCGCATCGTCACGCAGCAAACCGGATTATAAGAAACTGGAAAAGCTTTACTGCAAACACGTACTACCGTACGAGTCTTTGTCACATCACGACCGCCAAAAAATTCAAGGGATGGTGGACAAAGTATGGGCCGAACGTGCAAAAAGCATGATGCGTCGGGTTCAACGACCTCTGCACTACCAACAGCGCGTGCTTGGCGAGACGAACTCTGATGATGAAGACGAACTGTCTCTGGATCCTGAAATCGAGGACGTTAGGGTTGCCGGTAAACAGTGTTTCGACCGCATTGAGGAGTGCACGGGGAAAGGACGCCCTATGAACCTCTCTACTTACCGTAGGATTGCCGCGTACCTAAAAGAAATGATATTTTCAAATGGACCGGAGCCTACAACACTAGAGATAGAGGATAAGTACTGGAGCATTGTTACATTGGGAAAAGAGCATACAGGCGTGTTATCAGCGTTCATAGACACTTCAGTCAAAAACCTGGGCCACCCGAGCAATCCTAGCGAACCAGGAGGCAGTCATCCTTGGAACTTGAAGCGTCTAACTGAGAACCCGGACAACATTCTAAGCTCTCTCGGCAAGTCGCTGAGCGTGACGGTACCGACGCTGTGCTTGAACCAGCTCTTCAGCACTAACTGTTGGCACATGGACCCACACCAGCTCGCTTGGATGGACTACATGCATGAGGGACCTACTAAAATATGGTATGCGGTGGCAGAACGTGATGCGGCTGTATTCCGACGTGCGATGTTAATGCTGGTACCTGCCGTGGTGCAGCACAAAGGCATCTGGCTTGCATCTGACACAACCATGGTCCCGCCAAGCGAGCTCATAGCCCACGGCGTGCAATTACAACGCGTTGAGCAGAACATCGGCGAATACATTGTGGTATTCCCCGGCGCCTACGCTTCCTCCATCGCCACTGGACTCACCATTTCCGAGAGTATTTACTTCGAGAACACGTCCTTTCTGGCGAGGCTTGACACTACGTTCTTGCAAATGCGCGTGGACTGCGAGCCGGCGATGTTCTCTAACACGCTGCTGTTAATGCGGATGGCGAGTGACACAGCCGTGAGCGACACAGTACTGCCGCGAGTGAGGTCTCTGCTCAAAGAACTCCTTTCAGAAGAATTCGATGCGCGTCGCGAGGCTCAACATCTGAAGTGCAACATCATCGTCGATAAGGTTCGTGGAGATACAGCTCAGTGGCCTATTTCGTGGCCCTACCAGGAGGAATGTACAATCTGTCGCACTCCACTCATACTTTCCAAGAGCACGAGATACAACGAGTCGCGTTCGCTGATGTGCCTAAAGCACGCGTTACGAGTGTTCATTTGCGCTCCCGCAGAGGAAAAGCCTCAGCCGCCTCCCGTCACGTTGCTCTATTCCGCTGATGAACTCAACGGAATCATGCTAGCGCTAGAACGACGCATCTTTACCTCTACTTTATCCAAATCTACAGGTAATACTTGA
Protein Sequence
MGKIKKRLQAQRKFAQGAYVPPITNTSTSTPVMNASHKAVNAPGPVIINHSSARDIFTQMTIGRAHPHIDWPVRLKYESGLPSKPLEINTKKKLKEKKSNKVSNLKKKYVLRNNQKVSPYPRRLSITDSESDTPLSSLSTKIFKEKRETLTPPLPGDNQRQRRNIPPYSDPNFSYKTPDTSAVGCSFYDKTTEKDTLGSSTIAVSDCTIKSGQKKAKKRKTLNKNKGNIKIHKNKLPKYVTAFPDVETKSPAPIDEADAECFAIASNTLDFTGVDSPNVDSPSLLDGQIDTDSMLNVPYEKTAEWVRTHHQSGASVFDPTAEETSTTRPNKKTFLDNISLSPPDSNGTPVTLCTQNDDASSLTVLGRRLTALESYMSAPDNSESIMNAQDSNSDTSTIPSISDHEAQVSDNYFKIPDLPVRFTKRNKSMNNCPTRLFDTLQTLLNSLSVETESIYCNICKRCELLSKYRKVIKLLPVSDPNEPDILDTKPNDVYNFDCDEGGLKFLRRGRELVRNVLTTKRFPIWLSNLEMNLKKTMFQDEHKLGTLKRTLAFDKDDVLDEMVNKVITRVDYLARCIAEDKKELDKESSRRKLRSAKVTTLGGQKVSRPKKSLFQIKEASVTLAKLALPKQSTAPILDTLTAALPRDVESRRMVLCLTPVEKIIERGCLSQTFHALPLDDKNLSTIKLNINQTSQTLKIEQNSLSQQKVKETAPKVRKSSFDRTSTCEDFKKDKAPEIEQAQFDFPFHTNLHRAAMHTAKNKPLSIQSSESLLVFKPTPEEFKDPMAYIEKIKENARTYGICKIIPPKGFDVPSQLDDSVKFTTISQYLGRLYHRWGPTSREMAIIQTYVAMLANTRERDQFTKAPLFDGIELDLVKLYHVVVEEGGIEKMLADSENWTVVAEKMGFASSRSKPDYKKLEKLYCKHVLPYESLSHHDRQKIQGMVDKVWAERAKSMMRRVQRPLHYQQRVLGETNSDDEDELSLDPEIEDVRVAGKQCFDRIEECTGKGRPMNLSTYRRIAAYLKEMIFSNGPEPTTLEIEDKYWSIVTLGKEHTGVLSAFIDTSVKNLGHPSNPSEPGGSHPWNLKRLTENPDNILSSLGKSLSVTVPTLCLNQLFSTNCWHMDPHQLAWMDYMHEGPTKIWYAVAERDAAVFRRAMLMLVPAVVQHKGIWLASDTTMVPPSELIAHGVQLQRVEQNIGEYIVVFPGAYASSIATGLTISESIYFENTSFLARLDTTFLQMRVDCEPAMFSNTLLLMRMASDTAVSDTVLPRVRSLLKELLSEEFDARREAQHLKCNIIVDKVRGDTAQWPISWPYQEECTICRTPLILSKSTRYNESRSLMCLKHALRVFICAPAEEKPQPPPVTLLYSADELNGIMLALERRIFTSTLSKSTGNT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00737259;
90% Identity
-
80% Identity
-