Gnym007186.1
Basic Information
- Insect
- Galerucella nymphaeae
- Gene Symbol
- dmrta2
- Assembly
- GCA_963978555.1
- Location
- OZ021704.1:48795353-48800817[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.5e-28 1e-23 84.1 11.4 1 47 37 83 37 83 0.99
Sequence Information
- Coding Sequence
- atgagcaTACCGGGTAGCGGAGTCGACATGTCCGCTCTCATGTCGCAGCATCCAGTATTAGGTGCGATTCCTCCAGCTTTCTTTCTAAGAGCTTCCGAACGATATCAAAGGACACCGAAATGTGCAAGATGTCGTAATCACGGTGTTGTATCAGCTTTGAAAGGACATAAAAGATATTGTCGATGGCGAGATTGTAATTGCGCCAAATGCACTCTTATAGCTGAACGACAAAGAGTTATGGCTGCTCAGGTAGCTTTAAGAAGACAACAAGCTCAGGAAGAAAACGAAGCTAGAGAATTGGGAATATTGTTTCCGTCACCTTTACAACAGCAAGGCGTTGGAGAAAGTGCCGTGCATCAACCTCCTGTCACCAATACATCGGAGCTTGCTGTTCCTCCAGGTTTGCAAAGAAATAACTTCACCACAGCTTCAGACTCTTCGGAAACTTCCAGTCCAAtttCCAAAAGGCCGAGAATCAACGTCGAAGACTGCCACTTAGATGAATCGGATTCAGACCAAGAAGAAATCAAAAGAAATTCCCCGTTAAATCCTCCACCAGCAGCTCCTTTATCACCGGATCCTGTAACAAGTCCAGATCCCGATCTGGATGTAGAAGACACTCAAACGGAAGCACCTGAAAATTTATCGGTAAAACGTGAAAAACCTCCAAGTCCAGAAACACCACCTCACCAACAACAAGCATCTAATTTTATGCCGTATCAACATTCTTTCGGACAATTTCCTCCTCAGTATCAATCCCCCTATGCTCAAAGAAGCCCTATAGATGTTCTTATGAGAGTATTTCCGGGTAGAAGAAGATCTGACGTCGAAGCTATTTTACAAAGGTGTAAAGGAGACGTCCTGCAAGCTATGGAGTTAATGGTTAGTGGTTCACATGATGATCTATCATCACCTTCGGCATTTTCTCCGCTCGGTCCTCCGACAAATTTCCACCGATACAGTCCTTCTAGGAGGTTTTTATCTGCTCCCTATGCTGGTACGGGATATTTACCTACTGTGATTCGGCCTCCGACGGATTATTTATCGCTGATTGGTCCAGTACCTGATTTGTATAAAAATGAAAGTACGACTGCTTCTTCTCCAGGCTCTAATACGGGCTCAGACAAAACCAGTTACTCGGAATAG
- Protein Sequence
- MSIPGSGVDMSALMSQHPVLGAIPPAFFLRASERYQRTPKCARCRNHGVVSALKGHKRYCRWRDCNCAKCTLIAERQRVMAAQVALRRQQAQEENEARELGILFPSPLQQQGVGESAVHQPPVTNTSELAVPPGLQRNNFTTASDSSETSSPISKRPRINVEDCHLDESDSDQEEIKRNSPLNPPPAAPLSPDPVTSPDPDLDVEDTQTEAPENLSVKREKPPSPETPPHQQQASNFMPYQHSFGQFPPQYQSPYAQRSPIDVLMRVFPGRRRSDVEAILQRCKGDVLQAMELMVSGSHDDLSSPSAFSPLGPPTNFHRYSPSRRFLSAPYAGTGYLPTVIRPPTDYLSLIGPVPDLYKNESTTASSPGSNTGSDKTSYSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00110577;
- 90% Identity
- iTF_00910769;
- 80% Identity
- -