Basic Information

Insect: Galeopsomyia nigrocyanea
Gene Symbol: stc
Assembly: GCA_035047105.1
Location: JAWWMK010000001.1:9114436-9119048[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 1 4.1e+04 -4.3 1.6 15 19 513 517 512 517 0.81

2 15 0.079 3.3e+03 -0.6 0.4 4 10 546 552 545 554 0.94

3 15 3.9e-05 1.6 10.0 21.2 3 18 562 577 548 578 0.87

4 15 5.6e-07 0.023 15.9 15.3 1 18 614 631 614 632 0.96

5 15 0.039 1.6e+03 0.4 2.6 1 10 641 650 641 650 0.95

6 15 9.1e-10 3.7e-05 24.8 12.6 1 18 670 687 670 688 0.97

7 15 0.3 1.2e+04 -2.4 0.9 5 10 717 722 717 722 0.95

8 15 6.1e-07 0.025 15.8 12.9 4 18 735 749 728 750 0.86

9 15 0.77 3.2e+04 -3.8 2.0 5 10 779 784 779 784 0.93

10 15 0.00098 40 5.5 8.2 1 11 790 800 790 801 0.96

11 15 9.5e-11 3.9e-06 27.9 14.0 1 19 817 835 817 835 0.98

12 15 0.89 3.7e+04 -4.0 0.5 6 10 864 868 863 868 0.80

13 15 1 4.1e+04 -5.7 8.2 10 19 882 892 871 892 0.80

14 15 1.6e-07 0.0068 17.6 14.1 1 16 928 943 928 954 0.87

15 15 6.1e-07 0.025 15.8 14.0 1 19 960 979 960 979 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	1	4.1e+04	-4.3	1.6	15	19	513	517	512	517	0.81
2	15	0.079	3.3e+03	-0.6	0.4	4	10	546	552	545	554	0.94
3	15	3.9e-05	1.6	10.0	21.2	3	18	562	577	548	578	0.87
4	15	5.6e-07	0.023	15.9	15.3	1	18	614	631	614	632	0.96
5	15	0.039	1.6e+03	0.4	2.6	1	10	641	650	641	650	0.95
6	15	9.1e-10	3.7e-05	24.8	12.6	1	18	670	687	670	688	0.97
7	15	0.3	1.2e+04	-2.4	0.9	5	10	717	722	717	722	0.95
8	15	6.1e-07	0.025	15.8	12.9	4	18	735	749	728	750	0.86
9	15	0.77	3.2e+04	-3.8	2.0	5	10	779	784	779	784	0.93
10	15	0.00098	40	5.5	8.2	1	11	790	800	790	801	0.96
11	15	9.5e-11	3.9e-06	27.9	14.0	1	19	817	835	817	835	0.98
12	15	0.89	3.7e+04	-4.0	0.5	6	10	864	868	863	868	0.80
13	15	1	4.1e+04	-5.7	8.2	10	19	882	892	871	892	0.80
14	15	1.6e-07	0.0068	17.6	14.1	1	16	928	943	928	954	0.87
15	15	6.1e-07	0.025	15.8	14.0	1	19	960	979	960	979	0.97

Sequence Information

Coding Sequence: ATGGCTACTTGGGATGGGTCATACCAAGAACCAGATGGATCTACTTATTATGTCAATTCCAATAGCAATCAGGCATCAGCAAGTATTCCTTCATGGGACTACTATGTCCCAAATGCAAATAATGCATATGCACAAAATGCAACAGCTGCATACCCAATGGAAAGTAGCATGACGTATGAAAGAAGCCATCACAACTTTTATAATTCTGCCAACAGAAATGTCATCCCTTCAATGATGCCAAATGTTGCACAAAGTACAAATGCTTATTCTAACAATGAAGTTACTGCTGTTGCCAATGAAAATTCCACAAGATCTTCTGAGCCCCATCTCAATAATAGCAACCAATTGCCATGTTTTTATGAAGATAATAGAAGACTGTCTCAACAATCTTATTATCATAGCAAAAATAATCACTTTCAAGGTAATAAACGTAAGGATAATAAGAACTATTATCCATCTGATTTGGTTGAGCATTCAAATTTACAACCTACGGCAACTGAATTTGTACCAAATCAAAATATACAAGAGCATAGAAACCTTATGAATTCAAACAAAGGTAACAATAGAAGTAGATTGAATAAAGATAATAGAAATCAAGACGCAGCTCAAGCAGGAAGCGTTCCGTATGAAGATAATAGAGTAAAGTATAAtgatagaaaatttgaaaataagagAGATGCAGGGAGAAGGTGGAGAGATACACAGAATGGACAATTCTACAAGGATGATAGAAAGGAATATGGAAATCAAAGAAATCAAAATCCTAGGAGACCTCAAAGTGATCGCTACAACAACTACAACAGAAATTATTCTGATAAACCACGTGAGTATCCTGATAAACCACGCGATTATCCTGATAAACCACGTGATTATCCTGATAAACCACGTGATTATTCTGATAAACCACGGACGAATcgttttgagaaaaatgaagGGGAAAGTGTTCATTCCGAAACAAATGCTAATAGTGATATACAAAGAAACTTGAGTGGAATGCAGAATGGTAGTAACAGCAACAATAAGCCCTATGCTCCTATTGAAGCTGATAATACAGCATCTACAAGCAATCAATCTGttagaaattcaaaaccaTTCTCTAACAATGGTAGAGGAGATAGGTACTATGATAGAAAAGAACGTTACAATCCTAGAGATCCTAGAGACAGAAGGAGTAACTACCCAGAGCATAATGGATATAATAGAAGTAATTATAACAGAGATAATAAGTATGAAAAAAGAACGTACAGAGAAAATTCAGACAAAGAGATAACCGATTGGCGTGTTAGAAATGGTGAATCAGTAAATAAGCCAGTAGTGAAACGCCCACATTACAAGAAATATGAGCCAGATGATGCTGCAGGTCAAAGAGAAAGATTGACAGAGCTTTTGAATCGTGGTCAACTTGAATGTTTGGTATGTTGTGAATACATAAGACAACAAGATTACGTTTGGTCATGCAAAAATTGTTACCACGTTCTACATTTAAAATGTGTTCAAATGTGGGCTACTTCATCCCAAGATGatAGCGGTTGGCGTTGTCCTGCTTGCCAAAACGTCACCACGGACATACCAACAGACTACGAATGTTTCTGCGGCAAAACAAGGGCCCCAGAATGGAATCGACAAGATATCGCGCACTCATGTGGCGAGATTTGTGGTCGATCTCGTGCCGACACCAACTGCATCCACAAGTGTACGTTACTCTGTCATCCTGGTTGTTGTCCACCTTGCGACGCCATGGTCACCAAATCTTGTGGCTGTGGTCGTATGTCCCAAACGCAGAAATGCAGTACCGACACTCTTCTCGTATGCAAAGAGATTTGCGGTCGAGTACTTAATTGCGGCGTGCACAAATGCGAGAAGCCGTGTCATCATGGTAGCTGCGAGCTCTGTGATCAAACTGTCAAGCAAGactGTTTCTGTGGAAAACACACTCGGGAACAAACTTGCGTTTTGGACCTAGCGCCGATGTATTCctgtgaaaataaatgtgaaaaaatgcTTGATTGTAGCAATCATAAATGTCAGGACATTTGCCACCCCGGTGAATGCAAGCCTTGCTTATTGAAGCCTGAAATCGTCACGCATTGCTGTTGTGGACAAACACTCTTGACTGTCAAGAGAGAAAGTTGCTTAGATCCAATCCCAACTTGTGATAAAGTTTGTTCCAAGCGGCTGAAATGTGGACAGCCAAGCAACCCCCATACCTGCCAAGCAAACTGCCACGAAGGTGATTGTCCAGAATGCGATCTGTTTACGAAAGTCAAATGTCGCTGTGGCCACATGGACAAAGAAATCCCCTGCAAAGAACTTACAACTAAGGCAGACGATGCGCGTTGCGAAAAGAAATGTACGAAAAAGCGCTCTTGTGGGAAACATAAGTGCAATCAAATGTGTTGTATCGACATTGAGCACATATGTATGCTTCCATGTTCGAAGAATCTGAGTTGCGGCAAACACAAGTGTGAGCAAACTTGTCACAGAGGAAGATGCCAGCCGTGCTGGCGCAGTAGCTTCGACGAGTTGTACTGCGAGTGCGGTCAAGCGGTGATCTATCCTCCGGTACCATGCGGCACGCGTCGACCCGCGTGCGATCGGCCATGTAGTCGCGAGCATTCTTGCGATCACGAGGTCCTCCACAACTGCCATAGCGATCCGGTCTGCCCTCCGTGCAGCATTCTCACGCAGAAGTGGTGTTACGGCGAACACGAGCTGCGCAAATCGGTGCCCTGCTACCAGAACGAGGTATCCTGCGGATTGCCTTGCAACAAACCCATCTCCTGCGGTAGACACAAGTGCATACAGATGTGTCACTCGGGACCTTGCGAGAAACCTGGTCAGATTTGCGTGCAGCCGTGTACGGTGCCCAGAGATCTCTGCGGACATTCGTGCGCGGCTCCTTGCCACGAAGGCAAGTGCCCTGATGTGCCTTGCAAGGAAATGGTCAAGGTCACGTGCCAGTGTGGTCATAGAACAATGTCTCGCGTGTGCGCCGAAAATGCACGAGACTATCAGAGAATAGCTAGTGGAATTTTAGCAAGTAAAATGGCTGAGATGCAATTGGGACACTCAGTCGACCTCGAGGAAGTTTTCGGCCAGGGTGCCAAGAAGCAAAACCAGCTGAAGACTTTGGAGTGCAATGAAGAATGTAAAATAATCGAGAGGAATCGCCGATTGACGCTTGGTTTGCAGATTGTTAATCCCGATTTGAGTGGCAAATTGATGCCGAAGTACAGCGATCACATGAAGCAGTGGGGCAAGAAAGATCCCGCGTTCTGCCAAATGGTACATGACAGGCTTACGGAACTCGTACAATTGGCCAAAGCTTCCAAACAGAAATCTCGAAGTTACTCGTTCGATAGTATGAACAGAGATAAAAGGCAGTTCATTCACGAGTCTTGCGAGCACTTTGGTTGTGAAAGCCAGGCATACGATCAGGAACCTAAGCGTAATGTTGTGGCTACCGCTGTAAAAGATAAGtGTTGGTTACCAAGTTACAGTTTATTAGAATTATTGCAGAGAGAAAATGGCCAGCGAAAAGTTCCAGGACCAATGCTCAATAAACCAATGCTTAACAGTACTGACAGGAGCAAAGAGGTTTTGCAACTGAGCTCTAAGAAGAGCCTAAAACCGTTGTCTACAACTTCGGCTTCGCCACCGAAGTCTCCGGAGCCGGACatagattattttaattacaagGGATAA
Protein Sequence: MATWDGSYQEPDGSTYYVNSNSNQASASIPSWDYYVPNANNAYAQNATAAYPMESSMTYERSHHNFYNSANRNVIPSMMPNVAQSTNAYSNNEVTAVANENSTRSSEPHLNNSNQLPCFYEDNRRLSQQSYYHSKNNHFQGNKRKDNKNYYPSDLVEHSNLQPTATEFVPNQNIQEHRNLMNSNKGNNRSRLNKDNRNQDAAQAGSVPYEDNRVKYNDRKFENKRDAGRRWRDTQNGQFYKDDRKEYGNQRNQNPRRPQSDRYNNYNRNYSDKPREYPDKPRDYPDKPRDYPDKPRDYSDKPRTNRFEKNEGESVHSETNANSDIQRNLSGMQNGSNSNNKPYAPIEADNTASTSNQSVRNSKPFSNNGRGDRYYDRKERYNPRDPRDRRSNYPEHNGYNRSNYNRDNKYEKRTYRENSDKEITDWRVRNGESVNKPVVKRPHYKKYEPDDAAGQRERLTELLNRGQLECLVCCEYIRQQDYVWSCKNCYHVLHLKCVQMWATSSQDDSGWRCPACQNVTTDIPTDYECFCGKTRAPEWNRQDIAHSCGEICGRSRADTNCIHKCTLLCHPGCCPPCDAMVTKSCGCGRMSQTQKCSTDTLLVCKEICGRVLNCGVHKCEKPCHHGSCELCDQTVKQDCFCGKHTREQTCVLDLAPMYSCENKCEKMLDCSNHKCQDICHPGECKPCLLKPEIVTHCCCGQTLLTVKRESCLDPIPTCDKVCSKRLKCGQPSNPHTCQANCHEGDCPECDLFTKVKCRCGHMDKEIPCKELTTKADDARCEKKCTKKRSCGKHKCNQMCCIDIEHICMLPCSKNLSCGKHKCEQTCHRGRCQPCWRSSFDELYCECGQAVIYPPVPCGTRRPACDRPCSREHSCDHEVLHNCHSDPVCPPCSILTQKWCYGEHELRKSVPCYQNEVSCGLPCNKPISCGRHKCIQMCHSGPCEKPGQICVQPCTVPRDLCGHSCAAPCHEGKCPDVPCKEMVKVTCQCGHRTMSRVCAENARDYQRIASGILASKMAEMQLGHSVDLEEVFGQGAKKQNQLKTLECNEECKIIERNRRLTLGLQIVNPDLSGKLMPKYSDHMKQWGKKDPAFCQMVHDRLTELVQLAKASKQKSRSYSFDSMNRDKRQFIHESCEHFGCESQAYDQEPKRNVVATAVKDKCWLPSYSLLELLQRENGQRKVPGPMLNKPMLNSTDRSKEVLQLSSKKSLKPLSTTSASPPKSPEPDIDYFNYKG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00326768;
90% Identity: -
80% Identity: -